RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 NCAPHQ15003 741 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 PTGES3Q15185 160 aaKnown RBP5.68□□□□□ -1.5
XRN1-201ENST00000264951 KNOP1Q1ED39 458 aaKnown RBP5.68□□□□□ -1.5
XRN1-201ENST00000264951 CCDC153Q494R4 210 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 ZBTB49Q6ZSB9 765 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 OR8H2Q8N162 312 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 WNK4Q96J92 1243 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 STK33Q9BYT3 514 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 PLGRKTQ9HBL7 147 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 GPAMQ9HCL2 828 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 PRDM8Q9NQV8 689 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 NXF1Q9UBU9 619 aaKnown RBP5.68□□□□□ -1.5
XRN1-201ENST00000264951 FLT1P17948 1338 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 LRRC53A6NM62 1247 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 H3BNX3 289 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 PRPF4O43172 522 aaKnown RBP eCLIP5.68□□□□□ -1.5
XRN1-201ENST00000264951 CLTBP09497 229 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 FAUP35544 74 aaKnown RBP5.68□□□□□ -1.5
XRN1-201ENST00000264951 PIK3CGP48736 1102 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 HK2P52789 917 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 LRRC24Q50LG9 513 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 C12orf60Q5U649 245 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 TTC30AQ86WT1 665 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 TTC30BQ8N4P2 665 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 PRMT1Q99873 361 aaKnown RBP5.68□□□□□ -1.5
XRN1-201ENST00000264951 PABPC3Q9H361 631 aaKnown RBP5.68□□□□□ -1.5
XRN1-201ENST00000264951 SMURF2Q9HAU4 748 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 NCKIPSDQ9NZQ3 722 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 SH3GLB1Q9Y371 365 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 CLIC4Q9Y696 253 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 SQORQ9Y6N5 450 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 YEATS2Q9ULM3 1422 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 PDS5AQ29RF7 1337 aaKnown RBP5.67□□□□□ -1.5
XRN1-201ENST00000264951 TMEM120BA0PK00 339 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 UQCRBP14927 111 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 ZNF23P17027 643 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 ADSLP30566 484 aaPredicted RBP5.67□□□□□ -1.5
XRN1-201ENST00000264951 TRAF3Q13114 568 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 XRCC4Q13426 336 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 NAB1Q13506 487 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 SYTL3Q4VX76 610 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 TMPRSS6Q8IU80 811 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 CENPIQ92674 756 aaPredicted RBP5.67□□□□□ -1.5
XRN1-201ENST00000264951 NPHS2Q9NP85 383 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.67□□□□□ -1.5
XRN1-201ENST00000264951 TRMT6Q9UJA5 497 aaKnown RBP5.67□□□□□ -1.5
XRN1-201ENST00000264951 AK9Q5TCS8 1911 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 FAM47E-STBD1D6RA91 191 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 MDM4O15151 490 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 CYP19A1P11511 503 aaPredicted RBP5.67□□□□□ -1.5
XRN1-201ENST00000264951 ATF6P18850 670 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 GARTP22102 1010 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 KCNH2Q12809 1159 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 VEPH1Q14D04 833 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 TCHHL1Q5QJ38 904 aaPredicted RBP5.67□□□□□ -1.5
XRN1-201ENST00000264951 RASSF6Q6ZTQ3 369 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 C7orf31Q8N865 590 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 CABLES1Q8TDN4 633 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 TBCKQ8TEA7 893 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 ERP44Q9BS26 406 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 MYL10Q9BUA6 226 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 RXFP1Q9HBX9 757 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 TFCP2L1Q9NZI6 479 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 DAPK2Q9UIK4 370 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 FHOD1Q9Y613 1164 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 POTECB2RU33 542 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 KITP10721 976 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 ZAP70P43403 619 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 CASP4P49662 377 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 NR1H2P55055 460 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 ADARP55265 1226 aaKnown RBP5.67□□□□□ -1.5
XRN1-201ENST00000264951 PTK7Q13308 1070 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 EFHC1Q5JVL4 640 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 TTC23Q5W5X9 447 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 GALNT18Q6P9A2 607 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 KLHL17Q6TDP4 642 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 ABRAXAS1Q6UWZ7 409 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 LRRC17Q8N6Y2 441 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.67□□□□□ -1.5
XRN1-201ENST00000264951 MAGEB10Q96LZ2 347 aaPredicted RBP5.67□□□□□ -1.5
XRN1-201ENST00000264951 FICDQ9BVA6 458 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 UNC45AQ9H3U1 944 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 NDFIP2Q9NV92 336 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 CD2BP2O95400 341 aaKnown RBP5.67□□□□□ -1.5
XRN1-201ENST00000264951 APOC1P02654 83 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 ANXA1P04083 346 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 NCAM1P13591 858 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 DUOXA2Q1HG44 320 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 SAMD4BQ5PRF9 694 aaKnown RBP5.67□□□□□ -1.5
XRN1-201ENST00000264951 SLC25A24Q6NUK1 477 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 PPIL6Q8IXY8 311 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 KYQ8NBH2 561 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 MYLPFQ96A32 169 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 GPR101Q96P66 508 aaPredicted RBP5.67□□□□□ -1.5
XRN1-201ENST00000264951 NEDD4LQ96PU5 975 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 SAMSN1Q9NSI8 373 aaKnown RBP5.67□□□□□ -1.5
XRN1-201ENST00000264951 AHSPQ9NZD4 102 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 DRG1Q9Y295 367 aaKnown RBP5.67□□□□□ -1.5
XRN1-201ENST00000264951 NEU2Q9Y3R4 380 aa5.67□□□□□ -1.5
XRN1-201ENST00000264951 A0A0X1KG70 313 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms