RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 MTUS1Q9ULD2 1270 aa29.29■■■□□ 2.28
SMARCD3-201ENST00000262188 CNTN6Q9UQ52 1028 aa29.29■■■□□ 2.28
SMARCD3-201ENST00000262188 VWA8A3KMH1 1905 aa29.29■■■□□ 2.28
SMARCD3-201ENST00000262188 CHD9Q3L8U1 2897 aa29.29■■■□□ 2.28
SMARCD3-201ENST00000262188 SOWAHDA6NJG2 315 aa29.28■■■□□ 2.28
SMARCD3-201ENST00000262188 ATP2C2O75185 946 aa29.28■■■□□ 2.28
SMARCD3-201ENST00000262188 LAG3P18627 525 aa29.28■■■□□ 2.28
SMARCD3-201ENST00000262188 HNRNPH3P31942 346 aaKnown RBP29.28■■■□□ 2.28
SMARCD3-201ENST00000262188 GNL1P36915 607 aaPredicted RBP29.28■■■□□ 2.28
SMARCD3-201ENST00000262188 PSMC1P62191 440 aaKnown RBP29.28■■■□□ 2.28
SMARCD3-201ENST00000262188 TSR1Q2NL82 804 aaKnown RBP29.28■■■□□ 2.28
SMARCD3-201ENST00000262188 ACOT1Q86TX2 421 aa29.28■■■□□ 2.28
SMARCD3-201ENST00000262188 NOP9Q86U38 636 aaKnown RBP29.28■■■□□ 2.28
SMARCD3-201ENST00000262188 SLC4A11Q8NBS3 891 aa29.28■■■□□ 2.28
SMARCD3-201ENST00000262188 JAKMIP2Q96AA8 810 aa29.28■■■□□ 2.28
SMARCD3-201ENST00000262188 BAG1Q99933 345 aaPredicted RBP29.28■■■□□ 2.28
SMARCD3-201ENST00000262188 ZSWIM1Q9BR11 485 aa29.28■■■□□ 2.28
SMARCD3-201ENST00000262188 SNX25Q9H3E2 840 aa29.28■■■□□ 2.28
SMARCD3-201ENST00000262188 PUF60Q9UHX1 559 aaKnown RBP29.28■■■□□ 2.28
SMARCD3-201ENST00000262188 A8MXQ7 604 aa29.28■■■□□ 2.28
SMARCD3-201ENST00000262188 TACC1O75410 805 aa29.28■■■□□ 2.28
SMARCD3-201ENST00000262188 CCZ1BP86790 482 aa29.28■■■□□ 2.28
SMARCD3-201ENST00000262188 CCZ1P86791 482 aaPredicted RBP29.28■■■□□ 2.28
SMARCD3-201ENST00000262188 PTK2Q05397 1052 aa29.28■■■□□ 2.28
SMARCD3-201ENST00000262188 KLHL30Q0D2K2 578 aa29.28■■■□□ 2.28
SMARCD3-201ENST00000262188 MEA1Q16626 185 aa29.28■■■□□ 2.28
SMARCD3-201ENST00000262188 KIAA0319Q5VV43 1072 aa29.28■■■□□ 2.28
SMARCD3-201ENST00000262188 DPH6Q7L8W6 267 aa29.28■■■□□ 2.28
SMARCD3-201ENST00000262188 C12orf29Q8N999 325 aa29.28■■■□□ 2.28
SMARCD3-201ENST00000262188 RTP3Q9BQQ7 232 aa29.28■■■□□ 2.28
SMARCD3-201ENST00000262188 YBX2Q9Y2T7 364 aaKnown RBP29.28■■■□□ 2.28
SMARCD3-201ENST00000262188 CA3P07451 260 aa29.27■■■□□ 2.28
SMARCD3-201ENST00000262188 CFHP08603 1231 aa29.27■■■□□ 2.28
SMARCD3-201ENST00000262188 FERP16591 822 aa29.27■■■□□ 2.28
SMARCD3-201ENST00000262188 GTF2A1P52655 376 aaPredicted RBP29.27■■■□□ 2.28
SMARCD3-201ENST00000262188 ZNF571Q7Z3V5 609 aaPredicted RBP29.27■■■□□ 2.28
SMARCD3-201ENST00000262188 TFAP2BQ92481 460 aa29.27■■■□□ 2.28
SMARCD3-201ENST00000262188 SYN2Q92777 582 aaPredicted RBP29.27■■■□□ 2.28
SMARCD3-201ENST00000262188 FAXDC2Q96IV6 333 aa29.27■■■□□ 2.28
SMARCD3-201ENST00000262188 NUCKS1Q9H1E3 243 aaKnown RBP29.27■■■□□ 2.28
SMARCD3-201ENST00000262188 ZNHIT6Q9NWK9 470 aaKnown RBP29.27■■■□□ 2.28
SMARCD3-201ENST00000262188 DDX43Q9NXZ2 648 aaKnown RBP29.27■■■□□ 2.28
SMARCD3-201ENST00000262188 PCDHB8Q9UN66 801 aa29.27■■■□□ 2.28
SMARCD3-201ENST00000262188 LINC01553A4QN01 128 aa29.26■■■□□ 2.28
SMARCD3-201ENST00000262188 CSPG5O95196 566 aa29.26■■■□□ 2.28
SMARCD3-201ENST00000262188 WARSP23381 471 aaKnown RBP29.26■■■□□ 2.28
SMARCD3-201ENST00000262188 HNRNPH2P55795 449 aaKnown RBP29.26■■■□□ 2.28
SMARCD3-201ENST00000262188 EPS8L1Q8TE68 723 aa29.26■■■□□ 2.28
SMARCD3-201ENST00000262188 TMEM209Q96SK2 561 aa29.26■■■□□ 2.28
SMARCD3-201ENST00000262188 C17orf80Q9BSJ5 609 aa29.26■■■□□ 2.28
SMARCD3-201ENST00000262188 STXBP5LQ9Y2K9 1186 aa29.26■■■□□ 2.28
SMARCD3-201ENST00000262188 CDH23Q9H251 3354 aa29.26■■■□□ 2.28
SMARCD3-201ENST00000262188 SF3B1O75533 1304 aaKnown RBP eCLIP29.26■■■□□ 2.27
SMARCD3-201ENST00000262188 GABRDO14764 452 aa29.26■■■□□ 2.27
SMARCD3-201ENST00000262188 CYP11B1P15538 503 aa29.26■■■□□ 2.27
SMARCD3-201ENST00000262188 EIF4A3P38919 411 aaKnown RBP29.26■■■□□ 2.27
SMARCD3-201ENST00000262188 YWHAEP62258 255 aaKnown RBP29.26■■■□□ 2.27
SMARCD3-201ENST00000262188 RTP2Q5QGT7 225 aa29.26■■■□□ 2.27
SMARCD3-201ENST00000262188 ICE2Q659A1 982 aa29.26■■■□□ 2.27
SMARCD3-201ENST00000262188 TXLNBQ8N3L3 684 aa29.26■■■□□ 2.27
SMARCD3-201ENST00000262188 TMEM176AQ96HP8 235 aa29.26■■■□□ 2.27
SMARCD3-201ENST00000262188 CD19P15391 556 aa29.25■■■□□ 2.27
SMARCD3-201ENST00000262188 OLIG1Q8TAK6 271 aa29.25■■■□□ 2.27
SMARCD3-201ENST00000262188 CLP1Q92989 425 aaKnown RBP29.25■■■□□ 2.27
SMARCD3-201ENST00000262188 NT5C1AQ9BXI3 368 aa29.25■■■□□ 2.27
SMARCD3-201ENST00000262188 SPG21Q9NZD8 308 aa29.25■■■□□ 2.27
SMARCD3-201ENST00000262188 NOCTQ9UK39 431 aaKnown RBP29.25■■■□□ 2.27
SMARCD3-201ENST00000262188 TRAPPC3O43617 180 aa29.24■■■□□ 2.27
SMARCD3-201ENST00000262188 SERPING1P05155 500 aa29.24■■■□□ 2.27
SMARCD3-201ENST00000262188 GNA15P30679 374 aa29.24■■■□□ 2.27
SMARCD3-201ENST00000262188 OVOS1Q6IE37 1185 aa29.24■■■□□ 2.27
SMARCD3-201ENST00000262188 HEXIM2Q96MH2 286 aaKnown RBP29.24■■■□□ 2.27
SMARCD3-201ENST00000262188 FAM49BQ9NUQ9 324 aa29.24■■■□□ 2.27
SMARCD3-201ENST00000262188 CYP11A1P05108 521 aa29.24■■■□□ 2.27
SMARCD3-201ENST00000262188 MMEP08473 750 aa29.24■■■□□ 2.27
SMARCD3-201ENST00000262188 RAD9BQ6WBX8 426 aa29.24■■■□□ 2.27
SMARCD3-201ENST00000262188 CHRDL2Q6WN34 429 aa29.24■■■□□ 2.27
SMARCD3-201ENST00000262188 DNAAF5Q86Y56 855 aa29.24■■■□□ 2.27
SMARCD3-201ENST00000262188 KLHL23Q8NBE8 558 aa29.24■■■□□ 2.27
SMARCD3-201ENST00000262188 OR10T2Q8NGX3 314 aa29.24■■■□□ 2.27
SMARCD3-201ENST00000262188 TMEM169Q96HH4 297 aa29.24■■■□□ 2.27
SMARCD3-201ENST00000262188 NHEJ1Q9H9Q4 299 aaPredicted RBP29.24■■■□□ 2.27
SMARCD3-201ENST00000262188 THAP12O43422 761 aa29.23■■■□□ 2.27
SMARCD3-201ENST00000262188 CHRNB2P17787 502 aa29.23■■■□□ 2.27
SMARCD3-201ENST00000262188 FECHP22830 423 aa29.23■■■□□ 2.27
SMARCD3-201ENST00000262188 PRKCIP41743 596 aa29.23■■■□□ 2.27
SMARCD3-201ENST00000262188 VARS2Q5ST30 1063 aaKnown RBP29.23■■■□□ 2.27
SMARCD3-201ENST00000262188 PRSS55Q6UWB4 352 aaPredicted RBP29.23■■■□□ 2.27
SMARCD3-201ENST00000262188 PALB2Q86YC2 1186 aa29.23■■■□□ 2.27
SMARCD3-201ENST00000262188 TMEM86AQ8N2M4 240 aa29.23■■■□□ 2.27
SMARCD3-201ENST00000262188 DDX1Q92499 740 aaKnown RBP29.23■■■□□ 2.27
SMARCD3-201ENST00000262188 RSPH14Q9UHP6 348 aa29.23■■■□□ 2.27
SMARCD3-201ENST00000262188 PCDHB12Q9Y5F1 795 aa29.23■■■□□ 2.27
SMARCD3-201ENST00000262188 C2CD2LO14523 706 aa29.22■■■□□ 2.27
SMARCD3-201ENST00000262188 EFEMP2O95967 443 aa29.22■■■□□ 2.27
SMARCD3-201ENST00000262188 OR4Q2P0C623 313 aa29.22■■■□□ 2.27
SMARCD3-201ENST00000262188 FGFR3P22607 806 aa29.22■■■□□ 2.27
SMARCD3-201ENST00000262188 CTNNB1P35222 781 aa29.22■■■□□ 2.27
SMARCD3-201ENST00000262188 PDE6CP51160 858 aa29.22■■■□□ 2.27
SMARCD3-201ENST00000262188 YWHAHQ04917 246 aaPredicted RBP29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms