RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 MTMR1Q13613 665 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 SNX30Q5VWJ9 437 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 IGDCC3Q8IVU1 814 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 C10orf82Q8WW14 230 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 TSC22D3Q99576 134 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 APOBEC3GQ9HC16 384 aaKnown RBP13.69□□□□□ -0.22
SNX1-201ENST00000261889 TBX20Q9UMR3 447 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 G3BP2Q9UN86 482 aaKnown RBP13.69□□□□□ -0.22
SNX1-201ENST00000261889 USH1CQ9Y6N9 552 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 MYPNQ86TC9 1320 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 CLGNO14967 610 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 ECE2O60344 883 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 EDF1O60869 148 aaKnown RBP13.69□□□□□ -0.22
SNX1-201ENST00000261889 TBX10O75333 385 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 GNAZP19086 355 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 GRIK3Q13003 919 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 MOGSQ13724 837 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 MTERF2Q49AM1 385 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 DCUN1D2Q6PH85 259 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 NPNTQ6UXI9 565 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 CLNKQ7Z7G1 428 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 OR5B17Q8NGF7 314 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 RNF217Q8TC41 542 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 SCG3Q8WXD2 468 aaKnown RBP13.69□□□□□ -0.22
SNX1-201ENST00000261889 FAM161BQ96MY7 647 aa13.69□□□□□ -0.22
SNX1-201ENST00000261889 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.69□□□□□ -0.22
SNX1-201ENST00000261889 NFKBIEO00221 500 aa13.68□□□□□ -0.22
SNX1-201ENST00000261889 GYG2O15488 501 aa13.68□□□□□ -0.22
SNX1-201ENST00000261889 UGT1A9O60656 530 aa13.68□□□□□ -0.22
SNX1-201ENST00000261889 CCNB1P14635 433 aa13.68□□□□□ -0.22
SNX1-201ENST00000261889 GLRA2P23416 452 aa13.68□□□□□ -0.22
SNX1-201ENST00000261889 ANXA13P27216 316 aa13.68□□□□□ -0.22
SNX1-201ENST00000261889 ATP5DP30049 168 aa13.68□□□□□ -0.22
SNX1-201ENST00000261889 GNA15P30679 374 aa13.68□□□□□ -0.22
SNX1-201ENST00000261889 MAMLD1Q13495 774 aa13.68□□□□□ -0.22
SNX1-201ENST00000261889 WDR72Q3MJ13 1102 aa13.68□□□□□ -0.22
SNX1-201ENST00000261889 PPP1R15BQ5SWA1 713 aa13.68□□□□□ -0.22
SNX1-201ENST00000261889 RTKN2Q8IZC4 609 aa13.68□□□□□ -0.22
SNX1-201ENST00000261889 CFAP36Q96G28 342 aa13.68□□□□□ -0.22
SNX1-201ENST00000261889 SMYD3Q9H7B4 428 aa13.68□□□□□ -0.22
SNX1-201ENST00000261889 UGT1A7Q9HAW7 530 aa13.68□□□□□ -0.22
SNX1-201ENST00000261889 UGT1A10Q9HAW8 530 aa13.68□□□□□ -0.22
SNX1-201ENST00000261889 UGT1A8Q9HAW9 530 aa13.68□□□□□ -0.22
SNX1-201ENST00000261889 SLC17A6Q9P2U8 582 aa13.68□□□□□ -0.22
SNX1-201ENST00000261889 ASTN2O75129 1339 aaPredicted RBP13.68□□□□□ -0.22
SNX1-201ENST00000261889 hCG_2014768A0A024R1R8 64 aa13.68□□□□□ -0.22
SNX1-201ENST00000261889 HLA-DRAP01903 254 aa13.68□□□□□ -0.22
SNX1-201ENST00000261889 QARSP47897 775 aaKnown RBP13.68□□□□□ -0.22
SNX1-201ENST00000261889 PPP1R21Q6ZMI0 780 aa13.68□□□□□ -0.22
SNX1-201ENST00000261889 PDCD7Q8N8D1 485 aaKnown RBP13.68□□□□□ -0.22
SNX1-201ENST00000261889 GBP7Q8N8V2 638 aaPredicted RBP13.68□□□□□ -0.22
SNX1-201ENST00000261889 FAM71DQ8N9W8 422 aa13.68□□□□□ -0.22
SNX1-201ENST00000261889 CCHCR1Q8TD31 782 aa13.68□□□□□ -0.22
SNX1-201ENST00000261889 FNBP1Q96RU3 617 aa13.68□□□□□ -0.22
SNX1-201ENST00000261889 WDR83Q9BRX9 315 aaKnown RBP13.68□□□□□ -0.22
SNX1-201ENST00000261889 TMEM109Q9BVC6 243 aa13.68□□□□□ -0.22
SNX1-201ENST00000261889 MAGED2Q9UNF1 606 aaPredicted RBP13.68□□□□□ -0.22
SNX1-201ENST00000261889 AGTPBP1Q9UPW5 1226 aa13.68□□□□□ -0.22
SNX1-201ENST00000261889 SIPA1L1O43166 1804 aa13.68□□□□□ -0.22
SNX1-201ENST00000261889 GRAP2O75791 330 aa13.68□□□□□ -0.22
SNX1-201ENST00000261889 BRDTQ58F21 947 aaPredicted RBP13.68□□□□□ -0.22
SNX1-201ENST00000261889 ANO5Q75V66 913 aa13.68□□□□□ -0.22
SNX1-201ENST00000261889 POU5F2Q8N7G0 328 aa13.68□□□□□ -0.22
SNX1-201ENST00000261889 CCDC89Q8N998 374 aa13.68□□□□□ -0.22
SNX1-201ENST00000261889 FBXO36Q8NEA4 188 aa13.68□□□□□ -0.22
SNX1-201ENST00000261889 RAB3IPQ96QF0 476 aaPredicted RBP13.68□□□□□ -0.22
SNX1-201ENST00000261889 MMP19Q99542 508 aa13.68□□□□□ -0.22
SNX1-201ENST00000261889 MXRA8Q9BRK3 442 aa13.68□□□□□ -0.22
SNX1-201ENST00000261889 GABBR1Q9UBS5 961 aa13.68□□□□□ -0.22
SNX1-201ENST00000261889 GZMAP12544 262 aa13.67□□□□□ -0.22
SNX1-201ENST00000261889 PRAMEF18Q5VWM3 479 aa13.67□□□□□ -0.22
SNX1-201ENST00000261889 TDRD10Q5VZ19 366 aaKnown RBP13.67□□□□□ -0.22
SNX1-201ENST00000261889 RNF43Q68DV7 783 aa13.67□□□□□ -0.22
SNX1-201ENST00000261889 MOXD1Q6UVY6 613 aa13.67□□□□□ -0.22
SNX1-201ENST00000261889 TMEM161BQ8NDZ6 487 aa13.67□□□□□ -0.22
SNX1-201ENST00000261889 AGR3Q8TD06 166 aa13.67□□□□□ -0.22
SNX1-201ENST00000261889 HSPH1Q92598 858 aa13.67□□□□□ -0.22
SNX1-201ENST00000261889 KIFAP3Q92845 792 aa13.67□□□□□ -0.22
SNX1-201ENST00000261889 PAFAH2Q99487 392 aa13.67□□□□□ -0.22
SNX1-201ENST00000261889 PLVAPQ9BX97 442 aa13.67□□□□□ -0.22
SNX1-201ENST00000261889 GLT8D2Q9H1C3 349 aa13.67□□□□□ -0.22
SNX1-201ENST00000261889 LRMDAQ9H2I8 198 aa13.67□□□□□ -0.22
SNX1-201ENST00000261889 UVRAGQ9P2Y5 699 aa13.67□□□□□ -0.22
SNX1-201ENST00000261889 SEPT9Q9UHD8 586 aaPredicted RBP13.67□□□□□ -0.22
SNX1-201ENST00000261889 CLUHO75153 1309 aa13.67□□□□□ -0.22
SNX1-201ENST00000261889 NVLO15381 856 aaKnown RBP13.67□□□□□ -0.22
SNX1-201ENST00000261889 ALDH3A1P30838 453 aa13.67□□□□□ -0.22
SNX1-201ENST00000261889 YWHAGP61981 247 aaKnown RBP eCLIP13.67□□□□□ -0.22
SNX1-201ENST00000261889 FOXB2Q5VYV0 432 aa13.67□□□□□ -0.22
SNX1-201ENST00000261889 CDHR3Q6ZTQ4 885 aa13.67□□□□□ -0.22
SNX1-201ENST00000261889 PYROXD1Q8WU10 500 aa13.67□□□□□ -0.22
SNX1-201ENST00000261889 PPP1R36Q96LQ0 422 aa13.67□□□□□ -0.22
SNX1-201ENST00000261889 NMUR2Q9GZQ4 415 aa13.67□□□□□ -0.22
SNX1-201ENST00000261889 IL1RAPL1Q9NZN1 696 aa13.67□□□□□ -0.22
SNX1-201ENST00000261889 PIK3CDO00329 1044 aa13.66□□□□□ -0.22
SNX1-201ENST00000261889 ZMPSTE24O75844 475 aa13.66□□□□□ -0.22
SNX1-201ENST00000261889 P4HBP07237 508 aaKnown RBP13.66□□□□□ -0.22
SNX1-201ENST00000261889 MYL2P10916 166 aa13.66□□□□□ -0.22
SNX1-201ENST00000261889 UNGP13051 313 aaPredicted RBP13.66□□□□□ -0.22
SNX1-201ENST00000261889 RAP1GAPP47736 663 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms