RNA–Protein interactions for RNA: ENST00000261439.8

TBC1D1-201, Transcript of TBC1 domain family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TBC1D1, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-201ENST00000261439 OCM2P0CE71 109 aa15.18■□□□□ 0.02
TBC1D1-201ENST00000261439 OCMP0CE72 109 aaPredicted RBP15.18■□□□□ 0.02
TBC1D1-201ENST00000261439 GPD1P21695 349 aa15.18■□□□□ 0.02
TBC1D1-201ENST00000261439 FXR2P51116 673 aaKnown RBP eCLIP15.18■□□□□ 0.025e-6■□□□□ 8.3
TBC1D1-201ENST00000261439 RUNX1T1Q06455 604 aa15.18■□□□□ 0.02
TBC1D1-201ENST00000261439 CCDC15Q0P6D6 951 aa15.18■□□□□ 0.02
TBC1D1-201ENST00000261439 BAATQ14032 418 aaPredicted RBP15.18■□□□□ 0.02
TBC1D1-201ENST00000261439 SMIM5Q71RC9 77 aa15.18■□□□□ 0.02
TBC1D1-201ENST00000261439 MTDHQ86UE4 582 aaKnown RBP15.18■□□□□ 0.02
TBC1D1-201ENST00000261439 ALBP02768 609 aa15.18■□□□□ 0.02
TBC1D1-201ENST00000261439 NNMTP40261 264 aa15.18■□□□□ 0.02
TBC1D1-201ENST00000261439 EMC2Q15006 297 aa15.18■□□□□ 0.02
TBC1D1-201ENST00000261439 SETD3Q86TU7 594 aaPredicted RBP15.18■□□□□ 0.02
TBC1D1-201ENST00000261439 TTC30AQ86WT1 665 aa15.18■□□□□ 0.02
TBC1D1-201ENST00000261439 SUGP1Q8IWZ8 645 aaKnown RBP15.18■□□□□ 0.02
TBC1D1-201ENST00000261439 C1orf131Q8NDD1 294 aaKnown RBP15.18■□□□□ 0.02
TBC1D1-201ENST00000261439 PIK3R5Q8WYR1 880 aa15.18■□□□□ 0.02
TBC1D1-201ENST00000261439 FAM129AQ9BZQ8 928 aa15.18■□□□□ 0.02
TBC1D1-201ENST00000261439 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.18■□□□□ 0.02
TBC1D1-201ENST00000261439 FOXN3O00409 490 aaPredicted RBP15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 CCDC60Q8IWA6 550 aaPredicted RBP15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 SCUBE1Q8IWY4 988 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 FBXO25Q8TCJ0 367 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 URGCPQ8TCY9 931 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 SCN3BQ9NY72 215 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 KCND2Q9NZV8 630 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 SATB2Q9UPW6 733 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 ZNF263O14978 683 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 PSMD3O43242 534 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 WBP4O75554 376 aaKnown RBP15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 PDE5AO76074 875 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 GLI1P08151 1106 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 TFE3P19532 575 aaPredicted RBP15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 RPA1P27694 616 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 HMGCS2P54868 508 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 TRIM16LQ309B1 348 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 FUT11Q495W5 492 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 ACAD10Q6JQN1 1059 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 DNAAF5Q86Y56 855 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 FBXO36Q8NEA4 188 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 MED15Q96RN5 788 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 MKNK1Q9BUB5 465 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 PRDM5Q9NQX1 630 aaPredicted RBP15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 GIMAP4Q9NUV9 329 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 ITM2BQ9Y287 266 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 PKP3Q9Y446 797 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 HIST1H2AGP0C0S8 130 aaPredicted RBP15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 HIST1H2ADP20671 130 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 RASA1P20936 1047 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 DEFA1P59665 94 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 DEFA3P59666 94 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 SF3B3Q15393 1217 aaKnown RBP15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 TRAF7Q6Q0C0 670 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 RINLQ6ZS11 566 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 HORMAD1Q86X24 394 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 EFHBQ8N7U6 833 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 KRT35Q92764 455 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 HIST1H2AHQ96KK5 128 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 MAP3K14Q99558 947 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 HIST1H2AJQ99878 128 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 H2AFJQ9BTM1 129 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 CDC42EP4Q9H3Q1 356 aaKnown RBP15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 SLC37A4O43826 429 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 ATP6V1G2O95670 118 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 RARBP10826 455 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 AVPR1AP37288 418 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 MTMR2Q13614 643 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 NMD3Q96D46 503 aaKnown RBP15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 GTF3C4Q9UKN8 822 aa15.17■□□□□ 0.02
TBC1D1-201ENST00000261439 PDK1Q15118 436 aa15.16■□□□□ 0.02
TBC1D1-201ENST00000261439 STILQ15468 1287 aa15.16■□□□□ 0.02
TBC1D1-201ENST00000261439 DCAF6Q58WW2 860 aa15.16■□□□□ 0.02
TBC1D1-201ENST00000261439 P3H2Q8IVL5 708 aa15.16■□□□□ 0.02
TBC1D1-201ENST00000261439 SLC7A14Q8TBB6 771 aa15.16■□□□□ 0.02
TBC1D1-201ENST00000261439 JMJD4Q9H9V9 463 aa15.16■□□□□ 0.02
TBC1D1-201ENST00000261439 SETD1BQ9UPS6 1966 aaKnown RBP15.16■□□□□ 0.02
TBC1D1-201ENST00000261439 SHROOM2Q13796 1616 aa15.16■□□□□ 0.02
TBC1D1-201ENST00000261439 PNPLA6Q8IY17 1366 aa15.16■□□□□ 0.02
TBC1D1-201ENST00000261439 SMAPO00193 183 aa15.16■□□□□ 0.02
TBC1D1-201ENST00000261439 PLIN5Q00G26 463 aa15.16■□□□□ 0.02
TBC1D1-201ENST00000261439 KYAT1Q16773 422 aa15.16■□□□□ 0.02
TBC1D1-201ENST00000261439 AASDHQ4L235 1098 aaPredicted RBP15.16■□□□□ 0.02
TBC1D1-201ENST00000261439 NAIF1Q69YI7 327 aaPredicted RBP15.16■□□□□ 0.02
TBC1D1-201ENST00000261439 TRIM65Q6PJ69 517 aa15.16■□□□□ 0.02
TBC1D1-201ENST00000261439 DCUN1D1Q96GG9 259 aa15.16■□□□□ 0.02
TBC1D1-201ENST00000261439 TRIM62Q9BVG3 475 aa15.16■□□□□ 0.02
TBC1D1-201ENST00000261439 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.16■□□□□ 0.02
TBC1D1-201ENST00000261439 SEPT3Q9UH03 358 aa15.16■□□□□ 0.02
TBC1D1-201ENST00000261439 CRB1P82279 1406 aa15.16■□□□□ 0.02
TBC1D1-201ENST00000261439 SERPIND1P05546 499 aa15.16■□□□□ 0.02
TBC1D1-201ENST00000261439 TXNP10599 105 aaKnown RBP15.16■□□□□ 0.02
TBC1D1-201ENST00000261439 PTGER2P43116 358 aa15.16■□□□□ 0.02
TBC1D1-201ENST00000261439 TRIM28Q13263 835 aaKnown RBP15.16■□□□□ 0.02
TBC1D1-201ENST00000261439 CCDC33Q8N5R6 958 aa15.16■□□□□ 0.02
TBC1D1-201ENST00000261439 DDHD1Q8NEL9 900 aa15.16■□□□□ 0.02
TBC1D1-201ENST00000261439 OTUD5Q96G74 571 aa15.16■□□□□ 0.02
TBC1D1-201ENST00000261439 PRR12Q9ULL5 1215 aa15.16■□□□□ 0.02
TBC1D1-201ENST00000261439 PRR23D1E9PI22 279 aaPredicted RBP15.16■□□□□ 0.02
TBC1D1-201ENST00000261439 PRR23D2P0DMB1 279 aaPredicted RBP15.16■□□□□ 0.02
TBC1D1-201ENST00000261439 PTPN7P35236 360 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms