RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 HIDE1A8MVS5 230 aa22.11■■□□□ 1.13
RTCA-201ENST00000260563 TACC1O75410 805 aa22.11■■□□□ 1.13
RTCA-201ENST00000260563 RAP1GAPP47736 663 aa22.11■■□□□ 1.13
RTCA-201ENST00000260563 CTXN3Q4LDR2 81 aa22.11■■□□□ 1.13
RTCA-201ENST00000260563 RRAGAQ7L523 313 aa22.11■■□□□ 1.13
RTCA-201ENST00000260563 LIMS2Q7Z4I7 341 aa22.11■■□□□ 1.13
RTCA-201ENST00000260563 TATDN2Q93075 761 aa22.11■■□□□ 1.13
RTCA-201ENST00000260563 EMILIN2Q9BXX0 1053 aa22.11■■□□□ 1.13
RTCA-201ENST00000260563 BCO2Q9BYV7 579 aa22.11■■□□□ 1.13
RTCA-201ENST00000260563 UBE2TQ9NPD8 197 aaPredicted RBP22.11■■□□□ 1.13
RTCA-201ENST00000260563 MTRRQ9UBK8 725 aa22.11■■□□□ 1.13
RTCA-201ENST00000260563 MTCL1Q9Y4B5 1905 aaKnown RBP22.1■■□□□ 1.13
RTCA-201ENST00000260563 LILRB3O75022 631 aa22.1■■□□□ 1.13
RTCA-201ENST00000260563 OAZ2O95190 189 aa22.1■■□□□ 1.13
RTCA-201ENST00000260563 WARSP23381 471 aaKnown RBP22.1■■□□□ 1.13
RTCA-201ENST00000260563 TBXAS1P24557 533 aaPredicted RBP22.1■■□□□ 1.13
RTCA-201ENST00000260563 LHX1P48742 406 aa22.1■■□□□ 1.13
RTCA-201ENST00000260563 RAPGEF1Q13905 1077 aa22.1■■□□□ 1.13
RTCA-201ENST00000260563 MRPL58Q14197 206 aaKnown RBP22.1■■□□□ 1.13
RTCA-201ENST00000260563 LRRC8AQ8IWT6 810 aa22.1■■□□□ 1.13
RTCA-201ENST00000260563 THEM5Q8N1Q8 247 aa22.1■■□□□ 1.13
RTCA-201ENST00000260563 PPM1KQ8N3J5 372 aa22.1■■□□□ 1.13
RTCA-201ENST00000260563 MRPL43Q8N983 215 aaKnown RBP22.1■■□□□ 1.13
RTCA-201ENST00000260563 KBTBD7Q8WVZ9 684 aa22.1■■□□□ 1.13
RTCA-201ENST00000260563 PPP2R3CQ969Q6 453 aa22.1■■□□□ 1.13
RTCA-201ENST00000260563 FAM81BQ96LP2 452 aa22.1■■□□□ 1.13
RTCA-201ENST00000260563 SPAG5Q96R06 1193 aa22.1■■□□□ 1.13
RTCA-201ENST00000260563 MRPL45Q9BRJ2 306 aaKnown RBP22.1■■□□□ 1.13
RTCA-201ENST00000260563 PRRC2BQ5JSZ5 2229 aaKnown RBP22.09■■□□□ 1.13
RTCA-201ENST00000260563 LRRC53A6NM62 1247 aa22.09■■□□□ 1.13
RTCA-201ENST00000260563 IGFBP4P22692 258 aa22.09■■□□□ 1.13
RTCA-201ENST00000260563 GCNT1Q02742 428 aa22.09■■□□□ 1.13
RTCA-201ENST00000260563 CUL2Q13617 745 aa22.09■■□□□ 1.13
RTCA-201ENST00000260563 ADGRE1Q14246 886 aa22.09■■□□□ 1.13
RTCA-201ENST00000260563 OR8K1Q8NGG5 319 aa22.09■■□□□ 1.13
RTCA-201ENST00000260563 PANX2Q96RD6 677 aa22.09■■□□□ 1.13
RTCA-201ENST00000260563 DNAJC7Q99615 494 aa22.09■■□□□ 1.13
RTCA-201ENST00000260563 OXCT2Q9BYC2 517 aaPredicted RBP22.09■■□□□ 1.13
RTCA-201ENST00000260563 STK33Q9BYT3 514 aa22.09■■□□□ 1.13
RTCA-201ENST00000260563 NUCKS1Q9H1E3 243 aaKnown RBP22.09■■□□□ 1.13
RTCA-201ENST00000260563 SNX25Q9H3E2 840 aa22.09■■□□□ 1.13
RTCA-201ENST00000260563 NSUN3Q9H649 340 aaKnown RBP22.09■■□□□ 1.13
RTCA-201ENST00000260563 CYP3A43Q9HB55 503 aa22.09■■□□□ 1.13
RTCA-201ENST00000260563 RXFP1Q9HBX9 757 aa22.09■■□□□ 1.13
RTCA-201ENST00000260563 DDX43Q9NXZ2 648 aaKnown RBP22.09■■□□□ 1.13
RTCA-201ENST00000260563 FNIP2Q9P278 1114 aa22.09■■□□□ 1.13
RTCA-201ENST00000260563 MYO6Q9UM54 1294 aa22.09■■□□□ 1.13
RTCA-201ENST00000260563 BACE2Q9Y5Z0 518 aa22.09■■□□□ 1.13
RTCA-201ENST00000260563 FAM163BP0C2L3 166 aa22.08■■□□□ 1.13
RTCA-201ENST00000260563 RPL17P18621 184 aaKnown RBP22.08■■□□□ 1.13
RTCA-201ENST00000260563 NDUFV1P49821 464 aa22.08■■□□□ 1.13
RTCA-201ENST00000260563 MFAP3P55082 362 aa22.08■■□□□ 1.13
RTCA-201ENST00000260563 CDH8P55286 799 aa22.08■■□□□ 1.13
RTCA-201ENST00000260563 JAM2P57087 298 aa22.08■■□□□ 1.13
RTCA-201ENST00000260563 TSR1Q2NL82 804 aaKnown RBP22.08■■□□□ 1.13
RTCA-201ENST00000260563 OSTM1Q86WC4 334 aa22.08■■□□□ 1.13
RTCA-201ENST00000260563 GLYCTKQ8IVS8 523 aa22.08■■□□□ 1.13
RTCA-201ENST00000260563 OR6B3Q8NGW1 331 aa22.08■■□□□ 1.13
RTCA-201ENST00000260563 MYLIPQ8WY64 445 aa22.08■■□□□ 1.13
RTCA-201ENST00000260563 CDX2Q99626 313 aaPredicted RBP22.08■■□□□ 1.13
RTCA-201ENST00000260563 SDCBP2Q9H190 292 aa22.08■■□□□ 1.13
RTCA-201ENST00000260563 MTCH2Q9Y6C9 303 aa22.08■■□□□ 1.13
RTCA-201ENST00000260563 CDY1Q9Y6F8 540 aa22.08■■□□□ 1.13
RTCA-201ENST00000260563 GABRDO14764 452 aa22.07■■□□□ 1.12
RTCA-201ENST00000260563 ADH1AP07327 375 aa22.07■■□□□ 1.12
RTCA-201ENST00000260563 CNPP09543 421 aaKnown RBP22.07■■□□□ 1.12
RTCA-201ENST00000260563 WEE2P0C1S8 567 aa22.07■■□□□ 1.12
RTCA-201ENST00000260563 POU3F3P20264 500 aaPredicted RBP22.07■■□□□ 1.12
RTCA-201ENST00000260563 YWHAEP62258 255 aaKnown RBP22.07■■□□□ 1.12
RTCA-201ENST00000260563 ARHGAP44Q17R89 818 aa22.07■■□□□ 1.12
RTCA-201ENST00000260563 ENOSF1Q7L5Y1 443 aa22.07■■□□□ 1.12
RTCA-201ENST00000260563 ADGRD2Q7Z7M1 963 aa22.07■■□□□ 1.12
RTCA-201ENST00000260563 TRIM44Q96DX7 344 aaPredicted RBP22.07■■□□□ 1.12
RTCA-201ENST00000260563 KREMEN1Q96MU8 473 aa22.07■■□□□ 1.12
RTCA-201ENST00000260563 GUCD1Q96NT3 240 aa22.07■■□□□ 1.12
RTCA-201ENST00000260563 KLHL5Q96PQ7 755 aa22.07■■□□□ 1.12
RTCA-201ENST00000260563 ARID3AQ99856 593 aa22.07■■□□□ 1.12
RTCA-201ENST00000260563 PTPRDP23468 1912 aa22.07■■□□□ 1.12
RTCA-201ENST00000260563 OR6C75A6NL08 312 aa22.06■■□□□ 1.12
RTCA-201ENST00000260563 TEX28O15482 410 aa22.06■■□□□ 1.12
RTCA-201ENST00000260563 TBC1D4O60343 1298 aa22.06■■□□□ 1.12
RTCA-201ENST00000260563 CD58P19256 250 aa22.06■■□□□ 1.12
RTCA-201ENST00000260563 PCSK1P29120 753 aa22.06■■□□□ 1.12
RTCA-201ENST00000260563 DRAP1Q14919 205 aaPredicted RBP22.06■■□□□ 1.12
RTCA-201ENST00000260563 SFMBT2Q5VUG0 894 aa22.06■■□□□ 1.12
RTCA-201ENST00000260563 TTC39CQ8N584 583 aa22.06■■□□□ 1.12
RTCA-201ENST00000260563 OR10T2Q8NGX3 314 aa22.06■■□□□ 1.12
RTCA-201ENST00000260563 KAT5Q92993 513 aa22.06■■□□□ 1.12
RTCA-201ENST00000260563 RTP3Q9BQQ7 232 aa22.06■■□□□ 1.12
RTCA-201ENST00000260563 CLSTN3Q9BQT9 956 aa22.06■■□□□ 1.12
RTCA-201ENST00000260563 GPR88Q9GZN0 384 aa22.06■■□□□ 1.12
RTCA-201ENST00000260563 FAM124BQ9H5Z6 455 aaPredicted RBP22.06■■□□□ 1.12
RTCA-201ENST00000260563 A8MXQ7 604 aa22.06■■□□□ 1.12
RTCA-201ENST00000260563 F8VZ95 297 aa22.06■■□□□ 1.12
RTCA-201ENST00000260563 CPB1P15086 417 aa22.06■■□□□ 1.12
RTCA-201ENST00000260563 FOSL2P15408 326 aa22.06■■□□□ 1.12
RTCA-201ENST00000260563 GNL1P36915 607 aaPredicted RBP22.06■■□□□ 1.12
RTCA-201ENST00000260563 STAT1P42224 750 aa22.06■■□□□ 1.12
RTCA-201ENST00000260563 TSPY1Q01534 308 aa22.06■■□□□ 1.12
RTCA-201ENST00000260563 INCA1Q0VD86 236 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms