RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 MDH1BQ5I0G3 518 aa12.35□□□□□ -0.43
LIN28A-201ENST00000254231 PPP1R26Q5T8A7 1209 aaPredicted RBP12.35□□□□□ -0.43
LIN28A-201ENST00000254231 DENND2CQ68D51 928 aa12.35□□□□□ -0.43
LIN28A-201ENST00000254231 TAF2Q6P1X5 1199 aa12.35□□□□□ -0.43
LIN28A-201ENST00000254231 SRGAP1Q7Z6B7 1085 aa12.35□□□□□ -0.43
LIN28A-201ENST00000254231 SHC3Q92529 594 aa12.35□□□□□ -0.43
LIN28A-201ENST00000254231 GOLGA1Q92805 767 aa12.35□□□□□ -0.43
LIN28A-201ENST00000254231 PIWIL1Q96J94 861 aaKnown RBP12.35□□□□□ -0.43
LIN28A-201ENST00000254231 KCNK16Q96T55 309 aa12.35□□□□□ -0.43
LIN28A-201ENST00000254231 MAGEB5Q9BZ81 275 aa12.35□□□□□ -0.43
LIN28A-201ENST00000254231 TSGA10Q9BZW7 698 aa12.35□□□□□ -0.43
LIN28A-201ENST00000254231 CCDC113Q9H0I3 377 aa12.35□□□□□ -0.43
LIN28A-201ENST00000254231 TSPYL2Q9H2G4 693 aaPredicted RBP12.35□□□□□ -0.43
LIN28A-201ENST00000254231 METTL5Q9NRN9 209 aaKnown RBP12.35□□□□□ -0.43
LIN28A-201ENST00000254231 BCCIPQ9P287 314 aaKnown RBP eCLIP12.35□□□□□ -0.43
LIN28A-201ENST00000254231 TTC7AQ9ULT0 858 aaPredicted RBP12.35□□□□□ -0.43
LIN28A-201ENST00000254231 SLC27A5Q9Y2P5 690 aa12.35□□□□□ -0.43
LIN28A-201ENST00000254231 KPNA7A9QM74 516 aa12.35□□□□□ -0.43
LIN28A-201ENST00000254231 CRYBB1P53674 252 aaPredicted RBP12.35□□□□□ -0.43
LIN28A-201ENST00000254231 RTP1P59025 263 aa12.35□□□□□ -0.43
LIN28A-201ENST00000254231 TRIM60Q495X7 471 aa12.35□□□□□ -0.43
LIN28A-201ENST00000254231 FIGNQ5HY92 759 aa12.35□□□□□ -0.43
LIN28A-201ENST00000254231 FBXO38Q6PIJ6 1188 aa12.35□□□□□ -0.43
LIN28A-201ENST00000254231 KCTD17Q8N5Z5 321 aa12.35□□□□□ -0.43
LIN28A-201ENST00000254231 PARD6BQ9BYG5 372 aa12.35□□□□□ -0.43
LIN28A-201ENST00000254231 ELOVL4Q9GZR5 314 aa12.35□□□□□ -0.43
LIN28A-201ENST00000254231 SIK2Q9H0K1 926 aa12.35□□□□□ -0.43
LIN28A-201ENST00000254231 DNAJB4Q9UDY4 337 aa12.35□□□□□ -0.43
LIN28A-201ENST00000254231 NR2E1Q9Y466 385 aa12.35□□□□□ -0.43
LIN28A-201ENST00000254231 NR2E3Q9Y5X4 410 aa12.35□□□□□ -0.43
LIN28A-201ENST00000254231 SSU72P8A0A1W2PR75 194 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 ARL5CA6NH57 179 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 ADAMTS4O75173 837 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 PIAS1O75925 651 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 MCF2P10911 925 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 P4HA1P13674 534 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 ATXN1P54253 815 aaKnown RBP12.34□□□□□ -0.43
LIN28A-201ENST00000254231 DHX9Q08211 1270 aaKnown RBP12.34□□□□□ -0.43
LIN28A-201ENST00000254231 LIN9Q5TKA1 542 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 KDELC2Q7Z4H8 507 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 FAM71AQ8IYT1 594 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 HVCN1Q96D96 273 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 TLR10Q9BXR5 811 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 HIPK3Q9H422 1215 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 ST6GALNAC4Q9H4F1 302 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 JRKLQ9Y4A0 524 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 SCN4AP35499 1836 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 TBKBP1A7MCY6 615 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 TADA2AO75478 443 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 CKBP12277 381 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 PSMA2P25787 234 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 GYS2P54840 703 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 GJA9P57773 515 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 ARHGEF6Q15052 776 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 TAF12Q16514 161 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 SGO2Q562F6 1265 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 C8orf74Q6P047 294 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 CCDC105Q8IYK2 499 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 USP6NLQ92738 828 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 WDFY4Q6ZS81 3184 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 USP34Q70CQ2 3546 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 MEFVO15553 781 aaPredicted RBP12.34□□□□□ -0.43
LIN28A-201ENST00000254231 RAG1P15918 1043 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 NDUFV1P49821 464 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 CCDC70Q6NSX1 233 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 TMEM35BQ8NCS4 154 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 TPCN2Q8NHX9 752 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 MORC4Q8TE76 937 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 FBXL18Q96ME1 805 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 TMEM106CQ9BVX2 250 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 NT5C1AQ9BXI3 368 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 DDX43Q9NXZ2 648 aaKnown RBP12.34□□□□□ -0.43
LIN28A-201ENST00000254231 MRFAP1Q9Y605 127 aa12.34□□□□□ -0.43
LIN28A-201ENST00000254231 ZSWIM8A7E2V4 1837 aa12.33□□□□□ -0.44
LIN28A-201ENST00000254231 TCRBV7S2A1N4TA0A589 114 aa12.33□□□□□ -0.44
LIN28A-201ENST00000254231 CCDC78A2IDD5 438 aa12.33□□□□□ -0.44
LIN28A-201ENST00000254231 E5RJQ4 531 aa12.33□□□□□ -0.44
LIN28A-201ENST00000254231 GPR182O15218 404 aa12.33□□□□□ -0.44
LIN28A-201ENST00000254231 C1QTNF8P60827 252 aa12.33□□□□□ -0.44
LIN28A-201ENST00000254231 PTPN11Q06124 597 aaPredicted RBP12.33□□□□□ -0.44
LIN28A-201ENST00000254231 GLB1LQ6UWU2 654 aa12.33□□□□□ -0.44
LIN28A-201ENST00000254231 ZSWIM1Q9BR11 485 aa12.33□□□□□ -0.44
LIN28A-201ENST00000254231 RSAD1Q9HA92 442 aa12.33□□□□□ -0.44
LIN28A-201ENST00000254231 EPB41L5Q9HCM4 733 aa12.33□□□□□ -0.44
LIN28A-201ENST00000254231 CGNQ9P2M7 1197 aaKnown RBP12.33□□□□□ -0.44
LIN28A-201ENST00000254231 HEY1Q9Y5J3 304 aa12.33□□□□□ -0.44
LIN28A-201ENST00000254231 ANKRD62A6NC57 917 aa12.33□□□□□ -0.44
LIN28A-201ENST00000254231 BDNFP23560 247 aa12.33□□□□□ -0.44
LIN28A-201ENST00000254231 RFC1P35251 1148 aaPredicted RBP12.33□□□□□ -0.44
LIN28A-201ENST00000254231 MAP2K2P36507 400 aa12.33□□□□□ -0.44
LIN28A-201ENST00000254231 JAM2P57087 298 aa12.33□□□□□ -0.44
LIN28A-201ENST00000254231 LPIN1Q14693 890 aa12.33□□□□□ -0.44
LIN28A-201ENST00000254231 TMCO3Q6UWJ1 677 aa12.33□□□□□ -0.44
LIN28A-201ENST00000254231 SENP8Q96LD8 212 aa12.33□□□□□ -0.44
LIN28A-201ENST00000254231 CPXM1Q96SM3 734 aa12.33□□□□□ -0.44
LIN28A-201ENST00000254231 DMGDHQ9UI17 866 aaKnown RBP12.33□□□□□ -0.44
LIN28A-201ENST00000254231 KRT3P12035 628 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 ZNF697Q5TEC3 545 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 CDCA2Q69YH5 1023 aaPredicted RBP12.32□□□□□ -0.44
LIN28A-201ENST00000254231 RBM23Q86U06 439 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms