RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 DHX37Q8IY37 1157 aaKnown RBP20.64■□□□□ 0.89
CDC42EP1-201ENST00000249014 CYP4X1Q8N118 509 aa20.64■□□□□ 0.89
CDC42EP1-201ENST00000249014 CYTH4Q9UIA0 394 aa20.64■□□□□ 0.89
CDC42EP1-201ENST00000249014 DNM1LO00429 736 aa20.63■□□□□ 0.89
CDC42EP1-201ENST00000249014 SLC25A27O95847 323 aa20.63■□□□□ 0.89
CDC42EP1-201ENST00000249014 TNNC2P02585 160 aa20.63■□□□□ 0.89
CDC42EP1-201ENST00000249014 CXCL8P10145 99 aa20.63■□□□□ 0.89
CDC42EP1-201ENST00000249014 SF3A3Q12874 501 aaKnown RBP eCLIP20.63■□□□□ 0.89
CDC42EP1-201ENST00000249014 PIGHQ14442 188 aaPredicted RBP20.63■□□□□ 0.89
CDC42EP1-201ENST00000249014 LRRC14Q15048 493 aa20.63■□□□□ 0.89
CDC42EP1-201ENST00000249014 PTPN20Q4JDL3 420 aa20.63■□□□□ 0.89
CDC42EP1-201ENST00000249014 EFCAB12Q6NXP0 572 aa20.63■□□□□ 0.89
CDC42EP1-201ENST00000249014 KCNV1Q6PIU1 500 aa20.63■□□□□ 0.89
CDC42EP1-201ENST00000249014 RELL1Q8IUW5 271 aa20.63■□□□□ 0.89
CDC42EP1-201ENST00000249014 SULF1Q8IWU6 871 aa20.63■□□□□ 0.89
CDC42EP1-201ENST00000249014 CCDC13Q8IYE1 715 aa20.63■□□□□ 0.89
CDC42EP1-201ENST00000249014 CNPY4Q8N129 248 aa20.63■□□□□ 0.89
CDC42EP1-201ENST00000249014 ZNF148Q9UQR1 794 aa20.63■□□□□ 0.89
CDC42EP1-201ENST00000249014 hCG_1818297A0A087WSY0 165 aa20.63■□□□□ 0.89
CDC42EP1-201ENST00000249014 TMEM120BA0PK00 339 aa20.63■□□□□ 0.89
CDC42EP1-201ENST00000249014 ASAP2O43150 1006 aa20.63■□□□□ 0.89
CDC42EP1-201ENST00000249014 TCEA3O75764 348 aa20.63■□□□□ 0.89
CDC42EP1-201ENST00000249014 MBTD1Q05BQ5 628 aa20.63■□□□□ 0.89
CDC42EP1-201ENST00000249014 DRICH1Q6PGQ1 229 aaPredicted RBP20.63■□□□□ 0.89
CDC42EP1-201ENST00000249014 PIGWQ7Z7B1 504 aa20.63■□□□□ 0.89
CDC42EP1-201ENST00000249014 EXOC8Q8IYI6 725 aa20.63■□□□□ 0.89
CDC42EP1-201ENST00000249014 NIPA2Q8N8Q9 360 aa20.63■□□□□ 0.89
CDC42EP1-201ENST00000249014 DCPSQ96C86 337 aaKnown RBP20.63■□□□□ 0.89
CDC42EP1-201ENST00000249014 HAUS1Q96CS2 278 aa20.63■□□□□ 0.89
CDC42EP1-201ENST00000249014 ANKRD36BP1Q96IX9 119 aa20.63■□□□□ 0.89
CDC42EP1-201ENST00000249014 RBM15Q96T37 977 aaKnown RBP eCLIP20.63■□□□□ 0.891e-7■■■□□ 17.9
CDC42EP1-201ENST00000249014 CDT1Q9H211 546 aa20.63■□□□□ 0.89
CDC42EP1-201ENST00000249014 PDGFCQ9NRA1 345 aa20.63■□□□□ 0.89
CDC42EP1-201ENST00000249014 SIX4Q9UIU6 781 aa20.63■□□□□ 0.89
CDC42EP1-201ENST00000249014 RFC1P35251 1148 aaPredicted RBP20.62■□□□□ 0.89
CDC42EP1-201ENST00000249014 CDKN2BP42772 138 aa20.62■□□□□ 0.89
CDC42EP1-201ENST00000249014 LACTBP83111 547 aaPredicted RBP20.62■□□□□ 0.89
CDC42EP1-201ENST00000249014 LMNB2Q03252 620 aa20.62■□□□□ 0.89
CDC42EP1-201ENST00000249014 EAPPQ56P03 285 aaPredicted RBP20.62■□□□□ 0.89
CDC42EP1-201ENST00000249014 ANKRD20A8PQ5CZ79 823 aa20.62■□□□□ 0.89
CDC42EP1-201ENST00000249014 TFDP3Q5H9I0 405 aa20.62■□□□□ 0.89
CDC42EP1-201ENST00000249014 ZCCHC9Q8N567 271 aaKnown RBP20.62■□□□□ 0.89
CDC42EP1-201ENST00000249014 ALLCQ8N6M5 410 aa20.62■□□□□ 0.89
CDC42EP1-201ENST00000249014 MGARPQ8TDB4 240 aa20.62■□□□□ 0.89
CDC42EP1-201ENST00000249014 MPHOSPH6Q99547 160 aaKnown RBP20.62■□□□□ 0.89
CDC42EP1-201ENST00000249014 AGTPBP1Q9UPW5 1226 aa20.62■□□□□ 0.89
CDC42EP1-201ENST00000249014 GOLGA6L7A0A1B0GV03 622 aa20.62■□□□□ 0.89
CDC42EP1-201ENST00000249014 LRRD1A4D1F6 860 aa20.62■□□□□ 0.89
CDC42EP1-201ENST00000249014 H0YHG0 523 aa20.62■□□□□ 0.89
CDC42EP1-201ENST00000249014 KRT19P08727 400 aa20.62■□□□□ 0.89
CDC42EP1-201ENST00000249014 IREB2P48200 963 aaKnown RBP20.62■□□□□ 0.89
CDC42EP1-201ENST00000249014 CDH8P55286 799 aa20.62■□□□□ 0.89
CDC42EP1-201ENST00000249014 TAP1Q03518 808 aa20.62■□□□□ 0.89
CDC42EP1-201ENST00000249014 ORC1Q13415 861 aa20.62■□□□□ 0.89
CDC42EP1-201ENST00000249014 TMEM132AQ24JP5 1023 aa20.62■□□□□ 0.89
CDC42EP1-201ENST00000249014 ERO1BQ86YB8 467 aa20.62■□□□□ 0.89
CDC42EP1-201ENST00000249014 CCT6BQ92526 530 aa20.62■□□□□ 0.89
CDC42EP1-201ENST00000249014 MMP19Q99542 508 aa20.62■□□□□ 0.89
CDC42EP1-201ENST00000249014 RNPEPQ9H4A4 650 aa20.62■□□□□ 0.89
CDC42EP1-201ENST00000249014 ADARB2Q9NS39 739 aaKnown RBP20.62■□□□□ 0.89
CDC42EP1-201ENST00000249014 TBK1Q9UHD2 729 aa20.62■□□□□ 0.89
CDC42EP1-201ENST00000249014 CEP83Q9Y592 693 aa20.62■□□□□ 0.89
CDC42EP1-201ENST00000249014 GOLGA8SH3BPF8 625 aa20.61■□□□□ 0.89
CDC42EP1-201ENST00000249014 DNALI1O14645 258 aaPredicted RBP20.61■□□□□ 0.89
CDC42EP1-201ENST00000249014 NFICP08651 508 aa20.61■□□□□ 0.89
CDC42EP1-201ENST00000249014 VIMP08670 466 aaKnown RBP20.61■□□□□ 0.89
CDC42EP1-201ENST00000249014 CD19P15391 556 aa20.61■□□□□ 0.89
CDC42EP1-201ENST00000249014 ATP5DP30049 168 aa20.61■□□□□ 0.89
CDC42EP1-201ENST00000249014 PTPN7P35236 360 aa20.61■□□□□ 0.89
CDC42EP1-201ENST00000249014 PSMC4P43686 418 aa20.61■□□□□ 0.89
CDC42EP1-201ENST00000249014 ARSEP51690 589 aa20.61■□□□□ 0.89
CDC42EP1-201ENST00000249014 COPS2P61201 443 aa20.61■□□□□ 0.89
CDC42EP1-201ENST00000249014 MPP2Q14168 576 aa20.61■□□□□ 0.89
CDC42EP1-201ENST00000249014 TFDP1Q14186 410 aa20.61■□□□□ 0.89
CDC42EP1-201ENST00000249014 KCTD2Q14681 263 aa20.61■□□□□ 0.89
CDC42EP1-201ENST00000249014 OASLQ15646 514 aaKnown RBP20.61■□□□□ 0.89
CDC42EP1-201ENST00000249014 WDR72Q3MJ13 1102 aa20.61■□□□□ 0.89
CDC42EP1-201ENST00000249014 ARFGAP1Q8N6T3 406 aa20.61■□□□□ 0.89
CDC42EP1-201ENST00000249014 CCDC197Q8NCU1 140 aa20.61■□□□□ 0.89
CDC42EP1-201ENST00000249014 JOSD2Q8TAC2 188 aa20.61■□□□□ 0.89
CDC42EP1-201ENST00000249014 SDCBP2Q9H190 292 aa20.61■□□□□ 0.89
CDC42EP1-201ENST00000249014 SMARCAD1Q9H4L7 1026 aa20.61■□□□□ 0.89
CDC42EP1-201ENST00000249014 C3orf70A6NLC5 250 aaPredicted RBP20.61■□□□□ 0.89
CDC42EP1-201ENST00000249014 GPR25O00155 361 aa20.61■□□□□ 0.89
CDC42EP1-201ENST00000249014 CSDE1O75534 798 aaKnown RBP20.61■□□□□ 0.89
CDC42EP1-201ENST00000249014 TXNP10599 105 aaKnown RBP20.61■□□□□ 0.89
CDC42EP1-201ENST00000249014 MAGEA4P43358 317 aa20.61■□□□□ 0.89
CDC42EP1-201ENST00000249014 CYP4F22Q6NT55 531 aa20.61■□□□□ 0.89
CDC42EP1-201ENST00000249014 C1orf127Q8N9H9 656 aa20.61■□□□□ 0.89
CDC42EP1-201ENST00000249014 ELAC2Q9BQ52 826 aaKnown RBP20.61■□□□□ 0.89
CDC42EP1-201ENST00000249014 BCO2Q9BYV7 579 aa20.61■□□□□ 0.89
CDC42EP1-201ENST00000249014 MLXIPLQ9NP71 852 aa20.61■□□□□ 0.89
CDC42EP1-201ENST00000249014 LGALS13Q9UHV8 139 aa20.61■□□□□ 0.89
CDC42EP1-201ENST00000249014 NAALADL1Q9UQQ1 740 aa20.61■□□□□ 0.89
CDC42EP1-201ENST00000249014 TNFSF13BQ9Y275 285 aa20.61■□□□□ 0.89
CDC42EP1-201ENST00000249014 CXCL11O14625 94 aa20.6■□□□□ 0.89
CDC42EP1-201ENST00000249014 HBP1O60381 514 aa20.6■□□□□ 0.89
CDC42EP1-201ENST00000249014 RAD23BP54727 409 aa20.6■□□□□ 0.89
CDC42EP1-201ENST00000249014 MOGSQ13724 837 aa20.6■□□□□ 0.89
CDC42EP1-201ENST00000249014 KIAA0319LQ8IZA0 1049 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms