RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 HSP90AA5PQ58FG0 334 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 CBWD3Q5JTY5 395 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 CBWD5Q5RIA9 395 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 SPOPLQ6IQ16 392 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 ZNF720Q7Z2F6 126 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 MTDHQ86UE4 582 aaKnown RBP9.73□□□□□ -0.85
COL21A1-201ENST00000244728 TAS1R2Q8TE23 839 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 SLC26A7Q8TE54 656 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 MYLK2Q9H1R3 596 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 CCDC68Q9H2F9 335 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 KLHL8Q9P2G9 620 aaPredicted RBP9.73□□□□□ -0.85
COL21A1-201ENST00000244728 HEY2Q9UBP5 337 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 ASB14A6NK59 587 aa9.72□□□□□ -0.85
COL21A1-201ENST00000244728 PDGFRAP16234 1089 aa9.72□□□□□ -0.85
COL21A1-201ENST00000244728 THOC5Q13769 683 aaKnown RBP9.72□□□□□ -0.85
COL21A1-201ENST00000244728 RRP1BQ14684 758 aaKnown RBP9.72□□□□□ -0.85
COL21A1-201ENST00000244728 CYP4A22Q5TCH4 519 aa9.72□□□□□ -0.85
COL21A1-201ENST00000244728 WDR75Q8IWA0 830 aaKnown RBP9.72□□□□□ -0.85
COL21A1-201ENST00000244728 RIBC1Q8N443 379 aaPredicted RBP9.72□□□□□ -0.85
COL21A1-201ENST00000244728 THTPAQ9BU02 230 aa9.72□□□□□ -0.85
COL21A1-201ENST00000244728 RANBP17Q9H2T7 1088 aaKnown RBP9.72□□□□□ -0.85
COL21A1-201ENST00000244728 KCTD10Q9H3F6 313 aa9.72□□□□□ -0.85
COL21A1-201ENST00000244728 ASNSD1Q9NWL6 643 aa9.72□□□□□ -0.85
COL21A1-201ENST00000244728 KLK14Q9P0G3 267 aa9.72□□□□□ -0.85
COL21A1-201ENST00000244728 FAF1Q9UNN5 650 aaPredicted RBP9.72□□□□□ -0.85
COL21A1-201ENST00000244728 NALCNQ8IZF0 1738 aa9.72□□□□□ -0.85
COL21A1-201ENST00000244728 SLITRK3O94933 977 aa9.72□□□□□ -0.85
COL21A1-201ENST00000244728 ZCCHC18P0CG32 403 aa9.72□□□□□ -0.85
COL21A1-201ENST00000244728 PAPOLAP51003 745 aaKnown RBP9.72□□□□□ -0.85
COL21A1-201ENST00000244728 TNFAIP2Q03169 654 aa9.72□□□□□ -0.85
COL21A1-201ENST00000244728 TFDP2Q14188 446 aa9.72□□□□□ -0.85
COL21A1-201ENST00000244728 SLC47A2Q86VL8 602 aa9.72□□□□□ -0.85
COL21A1-201ENST00000244728 RASSF3Q86WH2 238 aa9.72□□□□□ -0.85
COL21A1-201ENST00000244728 FBXO16Q8IX29 292 aaPredicted RBP9.72□□□□□ -0.85
COL21A1-201ENST00000244728 SLC16A10Q8TF71 515 aa9.72□□□□□ -0.85
COL21A1-201ENST00000244728 CKAP2Q8WWK9 683 aa9.72□□□□□ -0.85
COL21A1-201ENST00000244728 PRPF31Q8WWY3 499 aaKnown RBP9.72□□□□□ -0.85
COL21A1-201ENST00000244728 SMARCAD1Q9H4L7 1026 aa9.72□□□□□ -0.85
COL21A1-201ENST00000244728 CYP26B1Q9NR63 512 aa9.72□□□□□ -0.85
COL21A1-201ENST00000244728 BCAP29Q9UHQ4 241 aa9.72□□□□□ -0.85
COL21A1-201ENST00000244728 KDM3BQ7LBC6 1761 aa9.72□□□□□ -0.85
COL21A1-201ENST00000244728 SPEF2Q9C093 1822 aa9.72□□□□□ -0.85
COL21A1-201ENST00000244728 H3BRJ5 948 aa9.72□□□□□ -0.85
COL21A1-201ENST00000244728 MGRN1O60291 552 aa9.72□□□□□ -0.85
COL21A1-201ENST00000244728 ATXN8OSP0DMR3 200 aa9.72□□□□□ -0.85
COL21A1-201ENST00000244728 BRD2P25440 801 aaKnown RBP9.72□□□□□ -0.85
COL21A1-201ENST00000244728 GTF2H1P32780 548 aa9.72□□□□□ -0.85
COL21A1-201ENST00000244728 HUNKP57058 714 aa9.72□□□□□ -0.85
COL21A1-201ENST00000244728 ANKRD13AQ8IZ07 590 aa9.72□□□□□ -0.85
COL21A1-201ENST00000244728 LRRC57Q8N9N7 239 aa9.72□□□□□ -0.85
COL21A1-201ENST00000244728 NSL1Q96IY1 281 aa9.72□□□□□ -0.85
COL21A1-201ENST00000244728 AGAP3Q96P47 875 aa9.72□□□□□ -0.85
COL21A1-201ENST00000244728 DNAJC18Q9H819 358 aa9.72□□□□□ -0.85
COL21A1-201ENST00000244728 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.72□□□□□ -0.85
COL21A1-201ENST00000244728 CPSF3Q9UKF6 684 aaKnown RBP9.72□□□□□ -0.85
COL21A1-201ENST00000244728 CASQ2O14958 399 aaPredicted RBP9.71□□□□□ -0.85
COL21A1-201ENST00000244728 NOL3O60936 208 aaKnown RBP9.71□□□□□ -0.85
COL21A1-201ENST00000244728 SNUPNO95149 360 aaKnown RBP9.71□□□□□ -0.85
COL21A1-201ENST00000244728 CALB2P22676 271 aa9.71□□□□□ -0.85
COL21A1-201ENST00000244728 ALDH18A1P54886 795 aaKnown RBP9.71□□□□□ -0.85
COL21A1-201ENST00000244728 SLC12A3P55017 1021 aa9.71□□□□□ -0.85
COL21A1-201ENST00000244728 GPAT2Q6NUI2 795 aa9.71□□□□□ -0.85
COL21A1-201ENST00000244728 C3orf62Q6ZUJ4 267 aa9.71□□□□□ -0.85
COL21A1-201ENST00000244728 NUDCD3Q8IVD9 361 aa9.71□□□□□ -0.85
COL21A1-201ENST00000244728 MAGEC3Q8TD91 643 aa9.71□□□□□ -0.85
COL21A1-201ENST00000244728 STK32AQ8WU08 396 aa9.71□□□□□ -0.85
COL21A1-201ENST00000244728 ATXN7L3BQ96GX2 97 aa9.71□□□□□ -0.85
COL21A1-201ENST00000244728 RNF19AQ9NV58 838 aa9.71□□□□□ -0.85
COL21A1-201ENST00000244728 PARVAQ9NVD7 372 aa9.71□□□□□ -0.85
COL21A1-201ENST00000244728 NINJ2Q9NZG7 142 aa9.71□□□□□ -0.85
COL21A1-201ENST00000244728 IP6K2Q9UHH9 426 aa9.71□□□□□ -0.85
COL21A1-201ENST00000244728 PCDHB2Q9Y5E7 798 aa9.71□□□□□ -0.85
COL21A1-201ENST00000244728 GPC4O75487 556 aa9.71□□□□□ -0.85
COL21A1-201ENST00000244728 ZNF157P51786 506 aaPredicted RBP9.71□□□□□ -0.85
COL21A1-201ENST00000244728 TPD52P55327 224 aaPredicted RBP9.71□□□□□ -0.85
COL21A1-201ENST00000244728 TMED1Q13445 227 aa9.71□□□□□ -0.85
COL21A1-201ENST00000244728 RABGAP1LQ5R372 815 aa9.71□□□□□ -0.85
COL21A1-201ENST00000244728 ATF7IP2Q5U623 682 aa9.71□□□□□ -0.85
COL21A1-201ENST00000244728 RASGEF1CQ8N431 466 aa9.71□□□□□ -0.85
COL21A1-201ENST00000244728 FAM84AQ96KN4 292 aa9.71□□□□□ -0.85
COL21A1-201ENST00000244728 IKZF4Q9H2S9 585 aa9.71□□□□□ -0.85
COL21A1-201ENST00000244728 RNPEPL1Q9HAU8 725 aa9.71□□□□□ -0.85
COL21A1-201ENST00000244728 ACP6Q9NPH0 428 aa9.71□□□□□ -0.85
COL21A1-201ENST00000244728 CHST7Q9NS84 486 aa9.71□□□□□ -0.85
COL21A1-201ENST00000244728 STRIP2Q9ULQ0 834 aa9.71□□□□□ -0.85
COL21A1-201ENST00000244728 ZC3H4Q9UPT8 1303 aaKnown RBP9.71□□□□□ -0.86
COL21A1-201ENST00000244728 IQCA1LA6NCM1 817 aa9.71□□□□□ -0.86
COL21A1-201ENST00000244728 CFLARO15519 480 aa9.71□□□□□ -0.86
COL21A1-201ENST00000244728 UNC5CO95185 931 aa9.71□□□□□ -0.86
COL21A1-201ENST00000244728 GZMAP12544 262 aa9.71□□□□□ -0.86
COL21A1-201ENST00000244728 CYP11B1P15538 503 aa9.71□□□□□ -0.86
COL21A1-201ENST00000244728 DRG2P55039 364 aaKnown RBP9.71□□□□□ -0.86
COL21A1-201ENST00000244728 CENPCQ03188 943 aa9.71□□□□□ -0.86
COL21A1-201ENST00000244728 MAP1SQ66K74 1059 aaPredicted RBP9.71□□□□□ -0.86
COL21A1-201ENST00000244728 PPP1R2P3Q6NXS1 205 aa9.71□□□□□ -0.86
COL21A1-201ENST00000244728 ENOSF1Q7L5Y1 443 aa9.71□□□□□ -0.86
COL21A1-201ENST00000244728 ARHGAP18Q8N392 663 aa9.71□□□□□ -0.86
COL21A1-201ENST00000244728 CCDC33Q8N5R6 958 aa9.71□□□□□ -0.86
COL21A1-201ENST00000244728 TRAPPC12Q8WVT3 735 aa9.71□□□□□ -0.86
COL21A1-201ENST00000244728 FOXP3Q9BZS1 431 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms