RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 ITM2BQ9Y287 266 aa13.96□□□□□ -0.18
NEK4-201ENST00000233027 ZC3H4Q9UPT8 1303 aaKnown RBP13.96□□□□□ -0.18
NEK4-201ENST00000233027 DPYSL4O14531 572 aa13.95□□□□□ -0.18
NEK4-201ENST00000233027 PSMD3O43242 534 aa13.95□□□□□ -0.18
NEK4-201ENST00000233027 SCTRP47872 440 aa13.95□□□□□ -0.18
NEK4-201ENST00000233027 DENND5BQ6ZUT9 1274 aa13.95□□□□□ -0.18
NEK4-201ENST00000233027 CDR2LQ86X02 465 aaPredicted RBP13.95□□□□□ -0.18
NEK4-201ENST00000233027 LRRN4CLQ8ND94 238 aa13.95□□□□□ -0.18
NEK4-201ENST00000233027 AGPAT3Q9NRZ7 376 aa13.95□□□□□ -0.18
NEK4-201ENST00000233027 TMEM161AQ9NX61 479 aa13.95□□□□□ -0.18
NEK4-201ENST00000233027 ZBTB7AO95365 584 aa13.95□□□□□ -0.18
NEK4-201ENST00000233027 CCDC159P0C7I6 412 aa13.95□□□□□ -0.18
NEK4-201ENST00000233027 H2AFXP16104 143 aaPredicted RBP13.95□□□□□ -0.18
NEK4-201ENST00000233027 SERPINB5P36952 375 aa13.95□□□□□ -0.18
NEK4-201ENST00000233027 PATL1Q86TB9 770 aaKnown RBP13.95□□□□□ -0.18
NEK4-201ENST00000233027 DCUN1D1Q96GG9 259 aa13.95□□□□□ -0.18
NEK4-201ENST00000233027 NYAP2Q9P242 653 aa13.95□□□□□ -0.18
NEK4-201ENST00000233027 ATP11BQ9Y2G3 1177 aa13.95□□□□□ -0.18
NEK4-201ENST00000233027 FKBP9O95302 570 aa13.95□□□□□ -0.18
NEK4-201ENST00000233027 TOB1P50616 345 aaPredicted RBP13.95□□□□□ -0.18
NEK4-201ENST00000233027 IRX1P78414 480 aaPredicted RBP13.95□□□□□ -0.18
NEK4-201ENST00000233027 FUT11Q495W5 492 aa13.95□□□□□ -0.18
NEK4-201ENST00000233027 FKBP9P1Q75LS8 142 aa13.95□□□□□ -0.18
NEK4-201ENST00000233027 SHCBP1Q8NEM2 672 aa13.95□□□□□ -0.18
NEK4-201ENST00000233027 ZNF669Q96BR6 464 aaPredicted RBP13.95□□□□□ -0.18
NEK4-201ENST00000233027 TRIM62Q9BVG3 475 aa13.95□□□□□ -0.18
NEK4-201ENST00000233027 NT5C1AQ9BXI3 368 aa13.95□□□□□ -0.18
NEK4-201ENST00000233027 TRIM45Q9H8W5 580 aaPredicted RBP13.95□□□□□ -0.18
NEK4-201ENST00000233027 NAGPAQ9UK23 515 aa13.95□□□□□ -0.18
NEK4-201ENST00000233027 ASB14A6NK59 587 aa13.95□□□□□ -0.18
NEK4-201ENST00000233027 FOXN3O00409 490 aaPredicted RBP13.95□□□□□ -0.18
NEK4-201ENST00000233027 NR3C2P08235 984 aa13.95□□□□□ -0.18
NEK4-201ENST00000233027 DSG1Q02413 1049 aa13.95□□□□□ -0.18
NEK4-201ENST00000233027 PKP3Q9Y446 797 aa13.95□□□□□ -0.18
NEK4-201ENST00000233027 DEAF1O75398 565 aaPredicted RBP13.95□□□□□ -0.18
NEK4-201ENST00000233027 WDR47O94967 919 aa13.95□□□□□ -0.18
NEK4-201ENST00000233027 CAMTA2O94983 1202 aa13.95□□□□□ -0.18
NEK4-201ENST00000233027 PPP3CCP48454 512 aa13.95□□□□□ -0.18
NEK4-201ENST00000233027 AMHR2Q16671 573 aa13.95□□□□□ -0.18
NEK4-201ENST00000233027 ELOA2Q8IYF1 753 aaPredicted RBP13.95□□□□□ -0.18
NEK4-201ENST00000233027 SEMA6BQ9H3T3 888 aa13.95□□□□□ -0.18
NEK4-201ENST00000233027 PPCSQ9HAB8 311 aa13.95□□□□□ -0.18
NEK4-201ENST00000233027 KCNH7Q9NS40 1196 aa13.95□□□□□ -0.18
NEK4-201ENST00000233027 FAM95CA0A1B0GW59 222 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 MED24O75448 989 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 KLRK1P26718 216 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 KCNMA1Q12791 1236 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 SYTL3Q4VX76 610 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 SNX31Q8N9S9 440 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 SH3TC2Q8TF17 1288 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 PABPC3Q9H361 631 aaKnown RBP13.94□□□□□ -0.18
NEK4-201ENST00000233027 COG2Q14746 738 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 STILQ15468 1287 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 FASTKD5Q7L8L6 764 aaKnown RBP13.94□□□□□ -0.18
NEK4-201ENST00000233027 PCYOX1LQ8NBM8 494 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 FBXO36Q8NEA4 188 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 CAAP1Q9H8G2 361 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 ZNF263O14978 683 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 MSH4O15457 936 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 HSPA1AP0DMV8 641 aaKnown RBP13.94□□□□□ -0.18
NEK4-201ENST00000233027 HSPA1BP0DMV9 641 aaKnown RBP13.94□□□□□ -0.18
NEK4-201ENST00000233027 ADRA2BP18089 450 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 COPAP53621 1224 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 UGP2Q16851 508 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 KCNT1Q5JUK3 1230 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 CHD1O14646 1710 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 AP3B1O00203 1094 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 SLC26A4O43511 780 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 SPAG6O75602 509 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 PRAMEF18Q5VWM3 479 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 TRIM65Q6PJ69 517 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 SEPT8Q92599 483 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 CNDP1Q96KN2 507 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 APOL5Q9BWW9 433 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 TBX20Q9UMR3 447 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 ITGB3P05106 788 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 GYS1P13807 737 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 RAP1GDS1P52306 607 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 ITIH4Q14624 930 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 TJAP1Q5JTD0 557 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 EFCAB12Q6NXP0 572 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 WDR93Q6P2C0 686 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 MAGEB18Q96M61 343 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 TARS2Q9BW92 718 aaKnown RBP13.94□□□□□ -0.18
NEK4-201ENST00000233027 ANKZF1Q9H8Y5 726 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 OSGEPQ9NPF4 335 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 GPRC5CQ9NQ84 441 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 TBC1D23Q9NUY8 699 aa13.94□□□□□ -0.18
NEK4-201ENST00000233027 CDV3Q9UKY7 258 aaKnown RBP13.94□□□□□ -0.18
NEK4-201ENST00000233027 E9PCH4 1651 aa13.93□□□□□ -0.18
NEK4-201ENST00000233027 C16orf96A6NNT2 1141 aa13.93□□□□□ -0.18
NEK4-201ENST00000233027 ZNF197O14709 1029 aa13.93□□□□□ -0.18
NEK4-201ENST00000233027 FDX1P10109 184 aa13.93□□□□□ -0.18
NEK4-201ENST00000233027 CYP11B2P19099 503 aa13.93□□□□□ -0.18
NEK4-201ENST00000233027 PDK1Q15118 436 aa13.93□□□□□ -0.18
NEK4-201ENST00000233027 NLRP9Q7RTR0 991 aa13.93□□□□□ -0.18
NEK4-201ENST00000233027 C11orf74Q86VG3 221 aa13.93□□□□□ -0.18
NEK4-201ENST00000233027 FOXP3Q9BZS1 431 aa13.93□□□□□ -0.18
NEK4-201ENST00000233027 NIF3L1Q9GZT8 377 aa13.93□□□□□ -0.18
NEK4-201ENST00000233027 MUC3BQ9H195 1237 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms