RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 FGF18O76093 207 aa14.96□□□□□ -0.01
SEC61B-201ENST00000223641 CA3P07451 260 aa14.96□□□□□ -0.01
SEC61B-201ENST00000223641 KRT5P13647 590 aa14.96□□□□□ -0.01
SEC61B-201ENST00000223641 CYP11B1P15538 503 aa14.96□□□□□ -0.01
SEC61B-201ENST00000223641 PBX2P40425 430 aa14.96□□□□□ -0.01
SEC61B-201ENST00000223641 USP8P40818 1118 aa14.96□□□□□ -0.01
SEC61B-201ENST00000223641 ERVK-21P61565 698 aa14.96□□□□□ -0.01
SEC61B-201ENST00000223641 TAP1Q03518 808 aa14.96□□□□□ -0.01
SEC61B-201ENST00000223641 PTK2Q05397 1052 aa14.96□□□□□ -0.01
SEC61B-201ENST00000223641 MAPK8IP2Q13387 824 aaPredicted RBP14.96□□□□□ -0.01
SEC61B-201ENST00000223641 TSR1Q2NL82 804 aaKnown RBP14.96□□□□□ -0.01
SEC61B-201ENST00000223641 ZNF394Q53GI3 561 aa14.96□□□□□ -0.01
SEC61B-201ENST00000223641 RTP2Q5QGT7 225 aa14.96□□□□□ -0.01
SEC61B-201ENST00000223641 VARS2Q5ST30 1063 aaKnown RBP14.96□□□□□ -0.01
SEC61B-201ENST00000223641 KIAA0319Q5VV43 1072 aa14.96□□□□□ -0.01
SEC61B-201ENST00000223641 KLHL23Q8NBE8 558 aa14.96□□□□□ -0.01
SEC61B-201ENST00000223641 PKMYT1Q99640 499 aa14.96□□□□□ -0.01
SEC61B-201ENST00000223641 CHP1Q99653 195 aa14.96□□□□□ -0.01
SEC61B-201ENST00000223641 ZSWIM1Q9BR11 485 aa14.96□□□□□ -0.01
SEC61B-201ENST00000223641 TTPALQ9BTX7 342 aa14.96□□□□□ -0.01
SEC61B-201ENST00000223641 HERC2P3Q9BVR0 1158 aa14.96□□□□□ -0.01
SEC61B-201ENST00000223641 OXCT2Q9BYC2 517 aaPredicted RBP14.96□□□□□ -0.01
SEC61B-201ENST00000223641 HAUS4Q9H6D7 363 aa14.96□□□□□ -0.01
SEC61B-201ENST00000223641 ZNHIT6Q9NWK9 470 aaKnown RBP14.96□□□□□ -0.01
SEC61B-201ENST00000223641 NOCTQ9UK39 431 aaKnown RBP14.96□□□□□ -0.01
SEC61B-201ENST00000223641 LZTS1Q9Y250 596 aa14.96□□□□□ -0.01
SEC61B-201ENST00000223641 VDRP11473 427 aa14.95□□□□□ -0.02
SEC61B-201ENST00000223641 PCSK1P29120 753 aa14.95□□□□□ -0.02
SEC61B-201ENST00000223641 DSG1Q02413 1049 aa14.95□□□□□ -0.02
SEC61B-201ENST00000223641 ARID5AQ03989 594 aa14.95□□□□□ -0.02
SEC61B-201ENST00000223641 KRT17Q04695 432 aa14.95□□□□□ -0.02
SEC61B-201ENST00000223641 KLHL30Q0D2K2 578 aa14.95□□□□□ -0.02
SEC61B-201ENST00000223641 RAB30Q15771 203 aa14.95□□□□□ -0.02
SEC61B-201ENST00000223641 ASTE1Q2TB18 679 aaPredicted RBP14.95□□□□□ -0.02
SEC61B-201ENST00000223641 FAM171BQ6P995 826 aa14.95□□□□□ -0.02
SEC61B-201ENST00000223641 ANKS3Q6ZW76 656 aa14.95□□□□□ -0.02
SEC61B-201ENST00000223641 ZNF571Q7Z3V5 609 aaPredicted RBP14.95□□□□□ -0.02
SEC61B-201ENST00000223641 SPRED2Q7Z698 418 aa14.95□□□□□ -0.02
SEC61B-201ENST00000223641 NOP9Q86U38 636 aaKnown RBP14.95□□□□□ -0.02
SEC61B-201ENST00000223641 ZNF677Q86XU0 584 aa14.95□□□□□ -0.02
SEC61B-201ENST00000223641 THEM5Q8N1Q8 247 aa14.95□□□□□ -0.02
SEC61B-201ENST00000223641 LNX1Q8TBB1 728 aaPredicted RBP14.95□□□□□ -0.02
SEC61B-201ENST00000223641 ZNF606Q8WXB4 792 aa14.95□□□□□ -0.02
SEC61B-201ENST00000223641 PIK3R5Q8WYR1 880 aa14.95□□□□□ -0.02
SEC61B-201ENST00000223641 TNIP3Q96KP6 325 aa14.95□□□□□ -0.02
SEC61B-201ENST00000223641 C17orf80Q9BSJ5 609 aa14.95□□□□□ -0.02
SEC61B-201ENST00000223641 DPEP3Q9H4B8 488 aa14.95□□□□□ -0.02
SEC61B-201ENST00000223641 CDH9Q9ULB4 789 aa14.95□□□□□ -0.02
SEC61B-201ENST00000223641 A0A1W2PPC1 479 aa14.94□□□□□ -0.02
SEC61B-201ENST00000223641 LILRB3O75022 631 aa14.94□□□□□ -0.02
SEC61B-201ENST00000223641 PLEKP08567 350 aaPredicted RBP14.94□□□□□ -0.02
SEC61B-201ENST00000223641 PDGFRBP09619 1106 aa14.94□□□□□ -0.02
SEC61B-201ENST00000223641 SKILP12757 684 aa14.94□□□□□ -0.02
SEC61B-201ENST00000223641 CHRNB2P17787 502 aa14.94□□□□□ -0.02
SEC61B-201ENST00000223641 PTPN1P18031 435 aaKnown RBP14.94□□□□□ -0.02
SEC61B-201ENST00000223641 ANXA13P27216 316 aa14.94□□□□□ -0.02
SEC61B-201ENST00000223641 GNA15P30679 374 aa14.94□□□□□ -0.02
SEC61B-201ENST00000223641 CTNNB1P35222 781 aa14.94□□□□□ -0.02
SEC61B-201ENST00000223641 PDE6CP51160 858 aa14.94□□□□□ -0.02
SEC61B-201ENST00000223641 SMAD3P84022 425 aaKnown RBP14.94□□□□□ -0.02
SEC61B-201ENST00000223641 CCZ1BP86790 482 aa14.94□□□□□ -0.02
SEC61B-201ENST00000223641 CCZ1P86791 482 aaPredicted RBP14.94□□□□□ -0.02
SEC61B-201ENST00000223641 UBE3AQ05086 875 aa14.94□□□□□ -0.02
SEC61B-201ENST00000223641 ARHGAP17Q68EM7 881 aa14.94□□□□□ -0.02
SEC61B-201ENST00000223641 CYP26C1Q6V0L0 522 aa14.94□□□□□ -0.02
SEC61B-201ENST00000223641 CHRDL2Q6WN34 429 aa14.94□□□□□ -0.02
SEC61B-201ENST00000223641 ACOT1Q86TX2 421 aa14.94□□□□□ -0.02
SEC61B-201ENST00000223641 TMTC1Q8IUR5 882 aa14.94□□□□□ -0.02
SEC61B-201ENST00000223641 B3GALNT2Q8NCR0 500 aa14.94□□□□□ -0.02
SEC61B-201ENST00000223641 CCDC112Q8NEF3 446 aa14.94□□□□□ -0.02
SEC61B-201ENST00000223641 OR10T2Q8NGX3 314 aa14.94□□□□□ -0.02
SEC61B-201ENST00000223641 SPPL3Q8TCT6 385 aa14.94□□□□□ -0.02
SEC61B-201ENST00000223641 TFAP2BQ92481 460 aa14.94□□□□□ -0.02
SEC61B-201ENST00000223641 B3GALT6Q96L58 329 aa14.94□□□□□ -0.02
SEC61B-201ENST00000223641 TGS1Q96RS0 853 aaKnown RBP14.94□□□□□ -0.02
SEC61B-201ENST00000223641 BAG1Q99933 345 aaPredicted RBP14.94□□□□□ -0.02
SEC61B-201ENST00000223641 ZBP1Q9H171 429 aa14.94□□□□□ -0.02
SEC61B-201ENST00000223641 CRTAC1Q9NQ79 661 aa14.94□□□□□ -0.02
SEC61B-201ENST00000223641 BACE2Q9Y5Z0 518 aa14.94□□□□□ -0.02
SEC61B-201ENST00000223641 LAMA3Q16787 3333 aa14.93□□□□□ -0.02
SEC61B-201ENST00000223641 OR6C75A6NL08 312 aa14.93□□□□□ -0.02
SEC61B-201ENST00000223641 H7C4K7 107 aa14.93□□□□□ -0.02
SEC61B-201ENST00000223641 O00370 1275 aa14.93□□□□□ -0.02
SEC61B-201ENST00000223641 ATP2C2O75185 946 aa14.93□□□□□ -0.02
SEC61B-201ENST00000223641 CALCAP01258 141 aa14.93□□□□□ -0.02
SEC61B-201ENST00000223641 PTMAP06454 111 aaKnown RBP14.93□□□□□ -0.02
SEC61B-201ENST00000223641 CTSAP10619 480 aa14.93□□□□□ -0.02
SEC61B-201ENST00000223641 ACAT1P24752 427 aaKnown RBP14.93□□□□□ -0.02
SEC61B-201ENST00000223641 FMO1Q01740 532 aa14.93□□□□□ -0.02
SEC61B-201ENST00000223641 CDR2Q01850 454 aa14.93□□□□□ -0.02
SEC61B-201ENST00000223641 ORC1Q13415 861 aa14.93□□□□□ -0.02
SEC61B-201ENST00000223641 BMS1Q14692 1282 aaKnown RBP14.93□□□□□ -0.02
SEC61B-201ENST00000223641 STILQ15468 1287 aa14.93□□□□□ -0.02
SEC61B-201ENST00000223641 CNGA2Q16280 664 aa14.93□□□□□ -0.02
SEC61B-201ENST00000223641 INTS6LQ5JSJ4 861 aaKnown RBP14.93□□□□□ -0.02
SEC61B-201ENST00000223641 ZNF280DQ6N043 979 aa14.93□□□□□ -0.02
SEC61B-201ENST00000223641 CEP57Q86XR8 500 aa14.93□□□□□ -0.02
SEC61B-201ENST00000223641 GPIHBP1Q8IV16 184 aa14.93□□□□□ -0.02
SEC61B-201ENST00000223641 CCDC170Q8IYT3 715 aa14.93□□□□□ -0.02
SEC61B-201ENST00000223641 VPS52Q8N1B4 723 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms