RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 XRRA1Q6P2D8 792 aa18.22■□□□□ 0.51
USB1-201ENST00000219281 SPOCD1Q6ZMY3 1216 aa18.22■□□□□ 0.51
USB1-201ENST00000219281 APOBEC3FQ8IUX4 373 aaKnown RBP18.22■□□□□ 0.51
USB1-201ENST00000219281 ZNF606Q8WXB4 792 aa18.22■□□□□ 0.51
USB1-201ENST00000219281 UTP4Q969X6 686 aaKnown RBP18.22■□□□□ 0.51
USB1-201ENST00000219281 C12orf42Q96LP6 360 aa18.22■□□□□ 0.51
USB1-201ENST00000219281 MCEEQ96PE7 176 aa18.22■□□□□ 0.51
USB1-201ENST00000219281 AS3MTQ9HBK9 375 aa18.22■□□□□ 0.51
USB1-201ENST00000219281 SLC9A2Q9UBY0 812 aa18.22■□□□□ 0.51
USB1-201ENST00000219281 CHKBQ9Y259 395 aa18.22■□□□□ 0.51
USB1-201ENST00000219281 RLFQ13129 1914 aa18.21■□□□□ 0.51
USB1-201ENST00000219281 A0A1W2PPM1 405 aa18.21■□□□□ 0.51
USB1-201ENST00000219281 MAFGO15525 162 aa18.21■□□□□ 0.51
USB1-201ENST00000219281 BANF1O75531 89 aa18.21■□□□□ 0.51
USB1-201ENST00000219281 MMP8P22894 467 aa18.21■□□□□ 0.51
USB1-201ENST00000219281 TBXAS1P24557 533 aaPredicted RBP18.21■□□□□ 0.51
USB1-201ENST00000219281 EMC2Q15006 297 aa18.21■□□□□ 0.51
USB1-201ENST00000219281 SLC1A5Q15758 541 aa18.21■□□□□ 0.51
USB1-201ENST00000219281 DRICH1Q6PGQ1 229 aaPredicted RBP18.21■□□□□ 0.51
USB1-201ENST00000219281 GGA3Q9NZ52 723 aa18.21■□□□□ 0.51
USB1-201ENST00000219281 CNTN6Q9UQ52 1028 aa18.21■□□□□ 0.51
USB1-201ENST00000219281 USH1CQ9Y6N9 552 aa18.21■□□□□ 0.51
USB1-201ENST00000219281 LRRIQ4A6NIV6 560 aa18.21■□□□□ 0.51
USB1-201ENST00000219281 GOLGA8SH3BPF8 625 aa18.21■□□□□ 0.51
USB1-201ENST00000219281 GOLGA8MH3BSY2 632 aa18.21■□□□□ 0.51
USB1-201ENST00000219281 ECM2O94769 699 aaPredicted RBP18.21■□□□□ 0.51
USB1-201ENST00000219281 IFNB1P01574 187 aa18.21■□□□□ 0.51
USB1-201ENST00000219281 CA4P22748 312 aa18.21■□□□□ 0.51
USB1-201ENST00000219281 TARSP26639 723 aaKnown RBP18.21■□□□□ 0.51
USB1-201ENST00000219281 PLCB3Q01970 1234 aa18.21■□□□□ 0.51
USB1-201ENST00000219281 OGDHQ02218 1023 aa18.21■□□□□ 0.51
USB1-201ENST00000219281 PDIA2Q13087 525 aaKnown RBP18.21■□□□□ 0.51
USB1-201ENST00000219281 MOGSQ13724 837 aa18.21■□□□□ 0.51
USB1-201ENST00000219281 CRYMQ14894 314 aa18.21■□□□□ 0.51
USB1-201ENST00000219281 TMEM132BQ14DG7 1078 aa18.21■□□□□ 0.51
USB1-201ENST00000219281 MORF4L2Q15014 288 aa18.21■□□□□ 0.51
USB1-201ENST00000219281 CCDC142Q17RM4 750 aa18.21■□□□□ 0.51
USB1-201ENST00000219281 RNASEH2BQ5TBB1 312 aaKnown RBP18.21■□□□□ 0.51
USB1-201ENST00000219281 ABHD15Q6UXT9 468 aa18.21■□□□□ 0.51
USB1-201ENST00000219281 DLK2Q6UY11 383 aa18.21■□□□□ 0.51
USB1-201ENST00000219281 ASAP3Q8TDY4 903 aa18.21■□□□□ 0.51
USB1-201ENST00000219281 RAB3IPQ96QF0 476 aaPredicted RBP18.21■□□□□ 0.51
USB1-201ENST00000219281 CGRRF1Q99675 332 aa18.21■□□□□ 0.51
USB1-201ENST00000219281 TMEM121Q9BTD3 319 aa18.21■□□□□ 0.51
USB1-201ENST00000219281 MSTO1Q9BUK6 570 aa18.21■□□□□ 0.51
USB1-201ENST00000219281 TARS2Q9BW92 718 aaKnown RBP18.21■□□□□ 0.51
USB1-201ENST00000219281 DONSONQ9NYP3 566 aa18.21■□□□□ 0.51
USB1-201ENST00000219281 SMG5Q9UPR3 1016 aaKnown RBP18.21■□□□□ 0.51
USB1-201ENST00000219281 DRG1Q9Y295 367 aaKnown RBP18.21■□□□□ 0.51
USB1-201ENST00000219281 DOCK1Q14185 1865 aa18.21■□□□□ 0.5
USB1-201ENST00000219281 ALOX15BO15296 676 aa18.2■□□□□ 0.5
USB1-201ENST00000219281 HARSP12081 509 aaKnown RBP18.2■□□□□ 0.5
USB1-201ENST00000219281 YARSP54577 528 aaKnown RBP18.2■□□□□ 0.5
USB1-201ENST00000219281 VCPP55072 806 aaKnown RBP18.2■□□□□ 0.5
USB1-201ENST00000219281 PDK4Q16654 411 aa18.2■□□□□ 0.5
USB1-201ENST00000219281 WDR72Q3MJ13 1102 aa18.2■□□□□ 0.5
USB1-201ENST00000219281 SNRNP48Q6IEG0 339 aaKnown RBP18.2■□□□□ 0.5
USB1-201ENST00000219281 ANKMY2Q8IV38 441 aa18.2■□□□□ 0.5
USB1-201ENST00000219281 LRRC8CQ8TDW0 803 aa18.2■□□□□ 0.5
USB1-201ENST00000219281 TMEM237Q96Q45 408 aa18.2■□□□□ 0.5
USB1-201ENST00000219281 LRRC37BQ96QE4 947 aa18.2■□□□□ 0.5
USB1-201ENST00000219281 HAO1Q9UJM8 370 aa18.2■□□□□ 0.5
USB1-201ENST00000219281 PARP14Q460N5 1801 aa18.2■□□□□ 0.5
USB1-201ENST00000219281 hCG_1818297A0A087WSY0 165 aa18.2■□□□□ 0.5
USB1-201ENST00000219281 K7ERI5 159 aa18.2■□□□□ 0.5
USB1-201ENST00000219281 SGK1O00141 431 aa18.2■□□□□ 0.5
USB1-201ENST00000219281 EDF1O60869 148 aaKnown RBP18.2■□□□□ 0.5
USB1-201ENST00000219281 SLC18A1P54219 525 aa18.2■□□□□ 0.5
USB1-201ENST00000219281 MCL1Q07820 350 aa18.2■□□□□ 0.5
USB1-201ENST00000219281 NCOA4Q13772 614 aa18.2■□□□□ 0.5
USB1-201ENST00000219281 OASLQ15646 514 aaKnown RBP18.2■□□□□ 0.5
USB1-201ENST00000219281 PPP1R2P3Q6NXS1 205 aa18.2■□□□□ 0.5
USB1-201ENST00000219281 DNAJC24Q6P3W2 148 aa18.2■□□□□ 0.5
USB1-201ENST00000219281 DCUN1D2Q6PH85 259 aa18.2■□□□□ 0.5
USB1-201ENST00000219281 CENPUQ71F23 418 aa18.2■□□□□ 0.5
USB1-201ENST00000219281 DEPTORQ8TB45 409 aa18.2■□□□□ 0.5
USB1-201ENST00000219281 ZNF570Q96NI8 536 aa18.2■□□□□ 0.5
USB1-201ENST00000219281 MAK16Q9BXY0 300 aaKnown RBP18.2■□□□□ 0.5
USB1-201ENST00000219281 FBXO40Q9UH90 709 aa18.2■□□□□ 0.5
USB1-201ENST00000219281 SSC5DA1L4H1 1573 aa18.19■□□□□ 0.5
USB1-201ENST00000219281 LRRD1A4D1F6 860 aa18.19■□□□□ 0.5
USB1-201ENST00000219281 C19orf81C9J6K1 198 aa18.19■□□□□ 0.5
USB1-201ENST00000219281 GLRA2P23416 452 aa18.19■□□□□ 0.5
USB1-201ENST00000219281 ABCD1P33897 745 aa18.19■□□□□ 0.5
USB1-201ENST00000219281 SLC8A3P57103 927 aa18.19■□□□□ 0.5
USB1-201ENST00000219281 XKR3Q5GH77 459 aa18.19■□□□□ 0.5
USB1-201ENST00000219281 HHATQ5VTY9 493 aa18.19■□□□□ 0.5
USB1-201ENST00000219281 SLFN12LQ6IEE8 588 aa18.19■□□□□ 0.5
USB1-201ENST00000219281 CATSPERGQ6ZRH7 1159 aa18.19■□□□□ 0.5
USB1-201ENST00000219281 RGS9BPQ6ZS82 235 aa18.19■□□□□ 0.5
USB1-201ENST00000219281 SENP1Q9P0U3 644 aa18.19■□□□□ 0.5
USB1-201ENST00000219281 CNTNAP2Q9UHC6 1331 aa18.19■□□□□ 0.5
USB1-201ENST00000219281 TYROBPO43914 113 aa18.19■□□□□ 0.5
USB1-201ENST00000219281 ATP5HO75947 161 aa18.19■□□□□ 0.5
USB1-201ENST00000219281 LDHAP00338 332 aaKnown RBP18.19■□□□□ 0.5
USB1-201ENST00000219281 EDN1P05305 212 aa18.19■□□□□ 0.5
USB1-201ENST00000219281 CALB1P05937 261 aa18.19■□□□□ 0.5
USB1-201ENST00000219281 ATP2A2P16615 1042 aaKnown RBP18.19■□□□□ 0.5
USB1-201ENST00000219281 BRD2P25440 801 aaKnown RBP18.19■□□□□ 0.5
USB1-201ENST00000219281 PRKG1Q13976 671 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms