RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 DNAJC10Q8IXB1 793 aa15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 IQCF2Q8IXL9 164 aa15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 GPR101Q96P66 508 aaPredicted RBP15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 NEU2Q9Y3R4 380 aa15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 AGRPO00253 132 aa15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 S100A6P06703 90 aa15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 POLBP06746 335 aa15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 LBPP18428 481 aa15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 STARP49675 285 aa15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 TIGD7Q6NT04 549 aaPredicted RBP15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 OSBPL8Q9BZF1 889 aa15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 NOL6Q9H6R4 1146 aaKnown RBP15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 hCG_1984214I3L0E3 225 aa15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 TAF2Q6P1X5 1199 aa15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 FBXO42Q6P3S6 717 aa15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 DHX40Q8IX18 779 aaKnown RBP15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 MMGT1Q8N4V1 131 aa15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 ATL2Q8NHH9 583 aa15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 ZNF302Q9NR11 478 aa15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 LOC100653049A0A140TA62 436 aa15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 PSMD12O00232 456 aaPredicted RBP15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 ZNF185O15231 689 aa15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 KRT34O76011 436 aa15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 TFE3P19532 575 aaPredicted RBP15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 SETD3Q86TU7 594 aaPredicted RBP15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 GLYCTKQ8IVS8 523 aa15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 MANSC1Q9H8J5 431 aa15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 POLR1DQ9Y2S0 133 aa15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 FANCAO15360 1455 aa15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 LGALS16A8MUM7 142 aa15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 NME5P56597 212 aa15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 DPYDQ12882 1025 aa15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 OLFML2AQ68BL7 652 aa15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 LINC00301Q8NCQ3 95 aa15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 COPS7BQ9H9Q2 264 aaPredicted RBP15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 UTYO14607 1347 aa15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 CLTBP09497 229 aa15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 RESP18Q5W5W9 173 aa15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 IGF2BP3O00425 579 aaKnown RBP eCLIP15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 CYP7B1O75881 506 aa15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 BCL10O95999 233 aa15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 ERVK-10P10266 1014 aa15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 PCNAP12004 261 aa15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 RCVRNP35243 200 aa15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 KYNUQ16719 465 aa15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 SYDE1Q6ZW31 735 aaPredicted RBP15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 KPNA1P52294 538 aaPredicted RBP15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 KNOP1Q1ED39 458 aaKnown RBP15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 TCEAL5Q5H9L2 206 aa15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 SLC13A5Q86YT5 568 aaPredicted RBP15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 SLC30A5Q8TAD4 765 aa15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 AP3D1O14617 1153 aa15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 FNTAP49354 379 aa15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 PRELPP51888 382 aa15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 ARID5BQ14865 1188 aa15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 HOMEZQ8IX15 550 aa15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 MAGED4Q96JG8 741 aa15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 GREM2Q9H772 168 aa15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 IL1RAPL1Q9NZN1 696 aa15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 EIF3LQ9Y262 564 aaKnown RBP15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 SH3BP1Q9Y3L3 701 aa15.19■□□□□ 0.02
SPTLC2-201ENST00000216484 MAGEA13PA6NCF6 341 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 CHRNB3Q05901 458 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 CAMK1Q14012 370 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 RCOR2Q8IZ40 523 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 SIX5Q8N196 739 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 UTP15Q8TED0 518 aaKnown RBP15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 SMARCAL1Q9NZC9 954 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 NCF1BA6NI72 391 aaPredicted RBP15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 NCF1CA8MVU1 366 aaPredicted RBP15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 NCF1P14598 390 aaPredicted RBP15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 MYL12AP19105 171 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 IPMKQ8NFU5 416 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 FAM167AQ96KS9 214 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 RBM15Q96T37 977 aaKnown RBP eCLIP15.18■□□□□ 0.029e-7■■□□□ 13.7
SPTLC2-201ENST00000216484 HEATR9A2RTY3 570 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 ARF3P61204 181 aaPredicted RBP15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 ARF1P84077 181 aaKnown RBP15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 GAS2L3Q86XJ1 694 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 SH2D3CQ8N5H7 860 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 CAMKK1Q8N5S9 505 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 SPATA18Q8TC71 538 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 CNKSR1Q969H4 720 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 SHCBP1LQ9BZQ2 653 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 SF3B1O75533 1304 aaKnown RBP eCLIP15.18■□□□□ 0.024e-6■■■■■ 142.9
SPTLC2-201ENST00000216484 RTN2O75298 545 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 HOXB7P09629 217 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 TOMM20Q15388 145 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 PGBD2Q6P3X8 592 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 USP17L8P0C7I0 530 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 FAM83EQ2M2I3 478 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 PPP1R2P1Q96PQ5 205 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 PDP2Q9P2J9 529 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 URB2Q14146 1524 aaKnown RBP15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 TRIM49D1C9J1S8 452 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 POTEIP0CG38 1075 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 SCP2P22307 547 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 ETFBP38117 255 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 SPANXN2Q5MJ10 180 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 TPD52L3Q96J77 140 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms