RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 GABRR2P28476 465 aa17.12■□□□□ 0.33
ERCC1-201ENST00000013807 CDC25CP30307 473 aa17.12■□□□□ 0.33
ERCC1-201ENST00000013807 CASP5P51878 434 aa17.12■□□□□ 0.33
ERCC1-201ENST00000013807 NRLP54845 237 aa17.12■□□□□ 0.33
ERCC1-201ENST00000013807 WNT7BP56706 349 aa17.12■□□□□ 0.33
ERCC1-201ENST00000013807 ARHGAP29Q52LW3 1261 aa17.12■□□□□ 0.33
ERCC1-201ENST00000013807 RALGPS2Q86X27 583 aaPredicted RBP17.12■□□□□ 0.33
ERCC1-201ENST00000013807 DCP1BQ8IZD4 617 aaKnown RBP17.12■□□□□ 0.33
ERCC1-201ENST00000013807 LRRC52Q8N7C0 313 aa17.12■□□□□ 0.33
ERCC1-201ENST00000013807 CACTINQ8WUQ7 758 aaKnown RBP17.12■□□□□ 0.33
ERCC1-201ENST00000013807 LEO1Q8WVC0 666 aaPredicted RBP17.12■□□□□ 0.33
ERCC1-201ENST00000013807 ZNF560Q96MR9 790 aa17.12■□□□□ 0.33
ERCC1-201ENST00000013807 ATXN3LQ9H3M9 355 aa17.12■□□□□ 0.33
ERCC1-201ENST00000013807 TMEM206Q9H813 350 aa17.12■□□□□ 0.33
ERCC1-201ENST00000013807 LMAN1LQ9HAT1 526 aa17.12■□□□□ 0.33
ERCC1-201ENST00000013807 GDAP2Q9NXN4 497 aa17.12■□□□□ 0.33
ERCC1-201ENST00000013807 ATG2BQ96BY7 2078 aa17.11■□□□□ 0.33
ERCC1-201ENST00000013807 MYBPHLA2RUH7 354 aa17.11■□□□□ 0.33
ERCC1-201ENST00000013807 SOAT2O75908 522 aa17.11■□□□□ 0.33
ERCC1-201ENST00000013807 PAPSS2O95340 614 aaPredicted RBP17.11■□□□□ 0.33
ERCC1-201ENST00000013807 GCNT3O95395 438 aa17.11■□□□□ 0.33
ERCC1-201ENST00000013807 CCNE1P24864 410 aa17.11■□□□□ 0.33
ERCC1-201ENST00000013807 PLCB2Q00722 1185 aa17.11■□□□□ 0.33
ERCC1-201ENST00000013807 VEPH1Q14D04 833 aa17.11■□□□□ 0.33
ERCC1-201ENST00000013807 NFE2Q16621 373 aaPredicted RBP17.11■□□□□ 0.33
ERCC1-201ENST00000013807 ARHGAP15Q53QZ3 475 aa17.11■□□□□ 0.33
ERCC1-201ENST00000013807 CNNM4Q6P4Q7 775 aa17.11■□□□□ 0.33
ERCC1-201ENST00000013807 TMEM86AQ8N2M4 240 aa17.11■□□□□ 0.33
ERCC1-201ENST00000013807 GPR161Q8N6U8 529 aaKnown RBP17.11■□□□□ 0.33
ERCC1-201ENST00000013807 C1orf127Q8N9H9 656 aa17.11■□□□□ 0.33
ERCC1-201ENST00000013807 CSGALNACT1Q8TDX6 532 aa17.11■□□□□ 0.33
ERCC1-201ENST00000013807 ACBD6Q9BR61 282 aa17.11■□□□□ 0.33
ERCC1-201ENST00000013807 FAM213AQ9BRX8 229 aa17.11■□□□□ 0.33
ERCC1-201ENST00000013807 NDRG2Q9UN36 371 aaKnown RBP17.11■□□□□ 0.33
ERCC1-201ENST00000013807 STX6O43752 255 aa17.1■□□□□ 0.33
ERCC1-201ENST00000013807 EXTL3O43909 919 aa17.1■□□□□ 0.33
ERCC1-201ENST00000013807 HMGA1P17096 107 aaKnown RBP17.1■□□□□ 0.33
ERCC1-201ENST00000013807 STAT6P42226 847 aa17.1■□□□□ 0.33
ERCC1-201ENST00000013807 CCR3P51677 355 aa17.1■□□□□ 0.33
ERCC1-201ENST00000013807 CEBPZQ03701 1054 aaKnown RBP17.1■□□□□ 0.33
ERCC1-201ENST00000013807 PPP2R5DQ14738 602 aa17.1■□□□□ 0.33
ERCC1-201ENST00000013807 MGAT5BQ3V5L5 792 aa17.1■□□□□ 0.33
ERCC1-201ENST00000013807 GPR158Q5T848 1215 aa17.1■□□□□ 0.33
ERCC1-201ENST00000013807 LIMS2Q7Z4I7 341 aa17.1■□□□□ 0.33
ERCC1-201ENST00000013807 TMEM150AQ86TG1 271 aa17.1■□□□□ 0.33
ERCC1-201ENST00000013807 YAF2Q8IY57 180 aa17.1■□□□□ 0.33
ERCC1-201ENST00000013807 SPEM1Q8N4L4 309 aa17.1■□□□□ 0.33
ERCC1-201ENST00000013807 LINC00301Q8NCQ3 95 aa17.1■□□□□ 0.33
ERCC1-201ENST00000013807 ZSWIM2Q8NEG5 633 aa17.1■□□□□ 0.33
ERCC1-201ENST00000013807 PKMYT1Q99640 499 aa17.1■□□□□ 0.33
ERCC1-201ENST00000013807 SEPT5Q99719 369 aaPredicted RBP17.1■□□□□ 0.33
ERCC1-201ENST00000013807 LPIN3Q9BQK8 851 aa17.1■□□□□ 0.33
ERCC1-201ENST00000013807 SLC46A2Q9BY10 475 aa17.1■□□□□ 0.33
ERCC1-201ENST00000013807 BACH2Q9BYV9 841 aa17.1■□□□□ 0.33
ERCC1-201ENST00000013807 TNMDQ9H2S6 317 aa17.1■□□□□ 0.33
ERCC1-201ENST00000013807 ABCB6Q9NP58 842 aa17.1■□□□□ 0.33
ERCC1-201ENST00000013807 PANK4Q9NVE7 773 aa17.1■□□□□ 0.33
ERCC1-201ENST00000013807 KBTBD4Q9NVX7 518 aa17.1■□□□□ 0.33
ERCC1-201ENST00000013807 DLL3Q9NYJ7 618 aa17.1■□□□□ 0.33
ERCC1-201ENST00000013807 RBAKQ9NYW8 714 aaPredicted RBP17.1■□□□□ 0.33
ERCC1-201ENST00000013807 TBC1D7Q9P0N9 293 aa17.1■□□□□ 0.33
ERCC1-201ENST00000013807 ITGA11Q9UKX5 1188 aa17.1■□□□□ 0.33
ERCC1-201ENST00000013807 GABRDO14764 452 aa17.09■□□□□ 0.33
ERCC1-201ENST00000013807 PPP6R2O75170 966 aa17.09■□□□□ 0.33
ERCC1-201ENST00000013807 F11P03951 625 aa17.09■□□□□ 0.33
ERCC1-201ENST00000013807 IDEP14735 1019 aa17.09■□□□□ 0.33
ERCC1-201ENST00000013807 DDX6P26196 483 aaKnown RBP eCLIP17.09■□□□□ 0.33
ERCC1-201ENST00000013807 GAS6Q14393 721 aa17.09■□□□□ 0.33
ERCC1-201ENST00000013807 E2F4Q16254 413 aa17.09■□□□□ 0.33
ERCC1-201ENST00000013807 DGKKQ5KSL6 1271 aa17.09■□□□□ 0.33
ERCC1-201ENST00000013807 TSSK4Q6SA08 328 aa17.09■□□□□ 0.33
ERCC1-201ENST00000013807 DPH6Q7L8W6 267 aa17.09■□□□□ 0.33
ERCC1-201ENST00000013807 KIAA2013Q8IYS2 634 aa17.09■□□□□ 0.33
ERCC1-201ENST00000013807 SYNPOQ8N3V7 929 aa17.09■□□□□ 0.33
ERCC1-201ENST00000013807 PDCL2Q8N4E4 241 aa17.09■□□□□ 0.33
ERCC1-201ENST00000013807 DCLK2Q8N568 766 aa17.09■□□□□ 0.33
ERCC1-201ENST00000013807 CELF5Q8N6W0 485 aaKnown RBP17.09■□□□□ 0.33
ERCC1-201ENST00000013807 BPIFB1Q8TDL5 484 aa17.09■□□□□ 0.33
ERCC1-201ENST00000013807 RMDN1Q96DB5 314 aa17.09■□□□□ 0.33
ERCC1-201ENST00000013807 SAAL1Q96ER3 474 aa17.09■□□□□ 0.33
ERCC1-201ENST00000013807 CBWD1Q9BRT8 395 aa17.09■□□□□ 0.33
ERCC1-201ENST00000013807 FGFBP2Q9BYJ0 223 aa17.09■□□□□ 0.33
ERCC1-201ENST00000013807 LRRC27Q9C0I9 530 aa17.09■□□□□ 0.33
ERCC1-201ENST00000013807 CUEDC2Q9H467 287 aa17.09■□□□□ 0.33
ERCC1-201ENST00000013807 TMLHEQ9NVH6 421 aa17.09■□□□□ 0.33
ERCC1-201ENST00000013807 AGAP1Q9UPQ3 857 aa17.09■□□□□ 0.33
ERCC1-201ENST00000013807 PCDHB5Q9Y5E4 795 aa17.09■□□□□ 0.33
ERCC1-201ENST00000013807 HELZP42694 1942 aaKnown RBP17.08■□□□□ 0.33
ERCC1-201ENST00000013807 SPECC1L-ADORA2AF8WAN1 911 aa17.08■□□□□ 0.32
ERCC1-201ENST00000013807 K7ELQ4 463 aaPredicted RBP17.08■□□□□ 0.32
ERCC1-201ENST00000013807 DPYSL4O14531 572 aa17.08■□□□□ 0.32
ERCC1-201ENST00000013807 PRAMEF12O95522 483 aa17.08■□□□□ 0.32
ERCC1-201ENST00000013807 ITGB3P05106 788 aa17.08■□□□□ 0.32
ERCC1-201ENST00000013807 PDIA4P13667 645 aaKnown RBP17.08■□□□□ 0.32
ERCC1-201ENST00000013807 POLR2BP30876 1174 aaKnown RBP17.08■□□□□ 0.32
ERCC1-201ENST00000013807 HOXA6P31267 233 aa17.08■□□□□ 0.32
ERCC1-201ENST00000013807 CTHP32929 405 aa17.08■□□□□ 0.32
ERCC1-201ENST00000013807 CXCL12P48061 93 aa17.08■□□□□ 0.32
ERCC1-201ENST00000013807 TFAMQ00059 246 aaKnown RBP17.08■□□□□ 0.32
ERCC1-201ENST00000013807 CCINQ13939 588 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms