RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Ell2Q3UKU1 639 aa17.73■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Mxd3Q80US8 206 aa17.73■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Pak4Q8BTW9 593 aa17.73■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Kdm1bQ8CIG3 826 aa17.73■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Znf426Q8R1D1 550 aa17.73■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Rmi1Q9D4G9 616 aa17.73■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Olfr552E9Q545 317 aa17.73■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Fdft1P53798 416 aa17.73■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Mark2Q05512 776 aa17.73■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Ppp1r12cQ3UMT1 782 aa17.73■□□□□ 0.43
Ctcf-201ENSMUST00000005841 RilpQ5ND29 369 aa17.73■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Scfd1Q8BRF7 639 aaKnown RBP17.73■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Ppm1kQ8BXN7 372 aa17.73■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Acvr1cQ8K348 493 aa17.73■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Zbed6D2EAC2 980 aa17.72■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Adam15O88839 864 aa17.72■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Smyd5Q3TYX3 416 aa17.72■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Fbxo11Q7TPD1 930 aaKnown RBP17.72■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Pkn2Q8BWW9 983 aa17.72■□□□□ 0.43
Ctcf-201ENSMUST00000005841 WdpcpQ8C456 722 aa17.72■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Slc25a11Q9CR62 314 aaKnown RBP17.72■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Trip11E9Q512 1976 aa17.72■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Hsd17b2P51658 381 aa17.72■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Eva1cP58659 440 aa17.72■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Elf3Q3UPW2 391 aa17.72■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Fam196bQ6GQV1 535 aa17.72■□□□□ 0.43
Ctcf-201ENSMUST00000005841 OgtQ8CGY8 1046 aa17.72■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Cpa5Q8R4H4 436 aa17.72■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Efhc1Q9D9T8 648 aa17.72■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Pcdh9F8VPK8 1237 aa17.71■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Slurp2P0DP59 97 aa17.71■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Q3U4G0 281 aa17.71■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Lipo3Q3UT41 399 aa17.71■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Map3k7Q62073 579 aa17.71■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Tmc4Q7TQ65 694 aa17.71■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Slc17a8Q8BFU8 601 aa17.71■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Pex19Q8VCI5 299 aa17.71■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Med24Q99K74 987 aa17.71■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Ecrg4Q99LS0 148 aa17.71■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Cnga3Q9JJZ8 631 aa17.71■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Cd320Q9Z1P5 260 aa17.71■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Rtl9Q32KG4 1339 aa17.71■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Gm8444F6XS56 118 aa17.71■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Sstr1P30873 391 aa17.71■□□□□ 0.43
Ctcf-201ENSMUST00000005841 VcpQ01853 806 aaKnown RBP17.71■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Ugt3a2Q8JZZ0 523 aa17.71■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Ndc80Q9D0F1 642 aaKnown RBP17.71■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Asb1Q9WV74 336 aa17.71■□□□□ 0.43
Ctcf-201ENSMUST00000005841 HnrnpcQ9Z204 313 aaKnown RBP17.71■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Srpk1O70551 648 aaKnown RBP17.71■□□□□ 0.43
Ctcf-201ENSMUST00000005841 ClppO88696 272 aa17.71■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Bop1P97452 732 aaKnown RBP17.71■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Abhd15Q5F2F2 459 aa17.71■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Shroom1Q5SX79 823 aa17.71■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Gpd2Q64521 727 aa17.71■□□□□ 0.43
Ctcf-201ENSMUST00000005841 CnstQ8CBC4 711 aa17.71■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Riox2Q8CD15 465 aa17.71■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Tgif2lx2Q8K5B9 231 aa17.71■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Usp11Q99K46 921 aa17.71■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Akr1e2Q9DCT1 301 aa17.71■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Arid2E9Q7E2 1828 aa17.71■□□□□ 0.43
Ctcf-201ENSMUST00000005841 Zfp457L7N1X4 647 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Dnmt3bO88509 859 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Adgrg6Q6F3F9 1165 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Rad54bQ6PFE3 886 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Ccnt2Q7TQK0 723 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Kirrel2Q7TSU7 700 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Stk32aQ8BGW6 398 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Arfip2Q8K221 341 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Pcdha2Q91Y17 948 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Taf11Q99JX1 211 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 CalcbQ99MP3 130 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Rasgrp2Q9QUG9 608 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Tspoap1Q7TNF8 1846 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Vmn2r104E9Q2J5 860 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Hsd11b2P51661 386 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 S100a5P63084 93 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Capn11Q6J756 714 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Gpr156Q6PCP7 798 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Tas2r109Q7M707 316 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Hsfy2Q80Y37 392 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Q80ZQ3 298 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Osbpl6Q8BXR9 959 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Haus8Q99L00 373 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Capn12Q9ER56 720 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Nrip2Q9JHR9 270 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Lonrf1D3YY23 762 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Gm379J3QQ19 296 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 BtkP35991 659 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Epas1P97481 874 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Cyp3a11Q64459 504 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Fads6Q80UG1 342 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Lrrc27Q80YS5 523 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Snx8Q8CFD4 459 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Otud7aQ8R554 926 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Rnf138rt1Q9D9M9 248 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Cables1Q9ESJ1 568 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Sv2aQ9JIS5 742 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 PolhQ9JJN0 694 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Dlc1Q9R0Z9 1092 aa17.7■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 16.1 ms