RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C SWS2P53937 143 aa1.49□□□□□ -2.17
VPS35YJL154C APJ1P53940 528 aa1.49□□□□□ -2.17
VPS35YJL154C SDC1Q03323 175 aa1.49□□□□□ -2.17
VPS35YJL154C YDR278CQ05612 105 aa1.49□□□□□ -2.17
VPS35YJL154C NKP2Q06162 153 aa1.49□□□□□ -2.17
VPS35YJL154C YLR030WQ07967 263 aa1.49□□□□□ -2.17
VPS35YJL154C COQ10Q08058 207 aa1.49□□□□□ -2.17
VPS35YJL154C YPR202WQ08993 238 aa1.49□□□□□ -2.17
VPS35YJL154C PRR2Q12310 699 aa1.49□□□□□ -2.17
VPS35YJL154C YIR021W-AQ3E739 70 aa1.49□□□□□ -2.17
VPS35YJL154C PDR18P53756 1333 aa1.49□□□□□ -2.17
VPS35YJL154C DDI2P0CH63 225 aa1.48□□□□□ -2.17
VPS35YJL154C DDI3P0CH64 225 aa1.48□□□□□ -2.17
VPS35YJL154C GCN3P14741 305 aa1.48□□□□□ -2.17
VPS35YJL154C ERD2P18414 219 aa1.48□□□□□ -2.17
VPS35YJL154C PHO13P19881 312 aa1.48□□□□□ -2.17
VPS35YJL154C SEC14P24280 304 aaKnown RBP1.48□□□□□ -2.17
VPS35YJL154C TRX3P25372 127 aa1.48□□□□□ -2.17
VPS35YJL154C MRP49P32388 137 aa1.48□□□□□ -2.17
VPS35YJL154C MRPL39P36533 70 aa1.48□□□□□ -2.17
VPS35YJL154C COS8P38723 381 aa1.48□□□□□ -2.17
VPS35YJL154C YHR127WP38833 243 aaKnown RBP1.48□□□□□ -2.17
VPS35YJL154C AIM2P39721 246 aa1.48□□□□□ -2.17
VPS35YJL154C GLE2P40066 365 aa1.48□□□□□ -2.17
VPS35YJL154C PDS1P40316 373 aaPredicted RBP1.48□□□□□ -2.17
VPS35YJL154C CPR7P47103 393 aa1.48□□□□□ -2.17
VPS35YJL154C APS2Q00381 147 aa1.48□□□□□ -2.17
VPS35YJL154C PET191Q02772 108 aa1.48□□□□□ -2.17
VPS35YJL154C GPI17Q04080 534 aa1.48□□□□□ -2.17
VPS35YJL154C YPR098CQ06089 161 aa1.48□□□□□ -2.17
VPS35YJL154C YPL257WQ08974 193 aa1.48□□□□□ -2.17
VPS35YJL154C MDM32Q12171 622 aa1.48□□□□□ -2.17
VPS35YJL154C RFM1Q12192 310 aa1.48□□□□□ -2.17
VPS35YJL154C YLR126CQ12288 251 aa1.48□□□□□ -2.17
VPS35YJL154C YPS3Q12303 508 aa1.48□□□□□ -2.17
VPS35YJL154C ATP14Q12349 124 aa1.48□□□□□ -2.17
VPS35YJL154C PEX11Q12462 236 aa1.48□□□□□ -2.17
VPS35YJL154C ADK1P07170 222 aaKnown RBP1.48□□□□□ -2.17
VPS35YJL154C YCR090CP25654 182 aaKnown RBP1.48□□□□□ -2.17
VPS35YJL154C OAC1P32332 324 aa1.48□□□□□ -2.17
VPS35YJL154C SER2P42941 309 aa1.48□□□□□ -2.17
VPS35YJL154C ERJ5P43613 295 aaPredicted RBP1.48□□□□□ -2.17
VPS35YJL154C SOL1P50278 321 aa1.48□□□□□ -2.17
VPS35YJL154C NHP10Q03435 203 aa1.48□□□□□ -2.17
VPS35YJL154C GOT1Q03554 138 aa1.48□□□□□ -2.17
VPS35YJL154C FMN1Q03778 218 aa1.48□□□□□ -2.17
VPS35YJL154C RAV2Q03956 351 aa1.48□□□□□ -2.17
VPS35YJL154C INM2Q05533 292 aa1.48□□□□□ -2.17
VPS35YJL154C LOA1Q06508 300 aa1.48□□□□□ -2.17
VPS35YJL154C FSF1Q12029 327 aaKnown RBP1.48□□□□□ -2.17
VPS35YJL154C ATG5Q12380 294 aa1.48□□□□□ -2.17
VPS35YJL154C MHT1Q12525 324 aa1.48□□□□□ -2.17
VPS35YJL154C YLR099W-AQ3E798 87 aa1.48□□□□□ -2.17
VPS35YJL154C YDL085C-AQ3E7B7 68 aaKnown RBP1.48□□□□□ -2.17
VPS35YJL154C IGO2Q9P305 131 aa1.48□□□□□ -2.17
VPS35YJL154C CNB1P25296 175 aa1.48□□□□□ -2.17
VPS35YJL154C AHC2P25649 128 aa1.48□□□□□ -2.17
VPS35YJL154C AGA2P32781 87 aa1.48□□□□□ -2.17
VPS35YJL154C SFC1P33303 322 aa1.48□□□□□ -2.17
VPS35YJL154C PAN3P36102 679 aaPredicted RBP1.48□□□□□ -2.17
VPS35YJL154C YJR015WP47090 510 aa1.48□□□□□ -2.17
VPS35YJL154C ARO8P53090 500 aaKnown RBP1.48□□□□□ -2.17
VPS35YJL154C YPL039WQ03080 316 aa1.48□□□□□ -2.17
VPS35YJL154C TRM12Q04235 462 aa1.48□□□□□ -2.17
VPS35YJL154C YDR124WQ04608 324 aa1.48□□□□□ -2.17
VPS35YJL154C SEI1Q06058 285 aa1.48□□□□□ -2.17
VPS35YJL154C CNL1Q06333 122 aa1.48□□□□□ -2.17
VPS35YJL154C TIM22Q12328 207 aa1.48□□□□□ -2.17
VPS35YJL154C YBL008W-AQ3E821 79 aa1.48□□□□□ -2.17
VPS35YJL154C YPL229WQ99395 206 aa1.48□□□□□ -2.17
VPS35YJL154C CSF1Q12150 2958 aa1.47□□□□□ -2.17
VPS35YJL154C YGL041W-AP0C5N3 154 aa1.47□□□□□ -2.17
VPS35YJL154C UBI4P0CG63 381 aaKnown RBP1.47□□□□□ -2.17
VPS35YJL154C SRL3P36167 246 aa1.47□□□□□ -2.17
VPS35YJL154C RPS20P38701 121 aaKnown RBP1.47□□□□□ -2.17
VPS35YJL154C YHL049CP38722 271 aa1.47□□□□□ -2.17
VPS35YJL154C DOG2P38773 246 aa1.47□□□□□ -2.17
VPS35YJL154C DOG1P38774 246 aa1.47□□□□□ -2.17
VPS35YJL154C AIM18P38884 321 aa1.47□□□□□ -2.17
VPS35YJL154C YGL101WP53144 215 aa1.47□□□□□ -2.17
VPS35YJL154C YNL184CP53876 108 aa1.47□□□□□ -2.17
VPS35YJL154C TMA23Q03525 211 aa1.47□□□□□ -2.17
VPS35YJL154C YMR253CQ04835 414 aa1.47□□□□□ -2.17
VPS35YJL154C ATG39Q06159 398 aa1.47□□□□□ -2.17
VPS35YJL154C SUE1Q06524 206 aa1.47□□□□□ -2.17
VPS35YJL154C SEC4P07560 215 aaKnown RBP1.47□□□□□ -2.17
VPS35YJL154C YKR104WP0CE69 306 aa1.47□□□□□ -2.17
VPS35YJL154C PBI2P0CT04 75 aaKnown RBP1.47□□□□□ -2.17
VPS35YJL154C RNP1P32385 249 aa1.47□□□□□ -2.17
VPS35YJL154C YPT31P38555 223 aaKnown RBP1.47□□□□□ -2.17
VPS35YJL154C TEM1P38987 245 aa1.47□□□□□ -2.17
VPS35YJL154C YEA4P40004 342 aa1.47□□□□□ -2.17
VPS35YJL154C RPA43P46669 326 aa1.47□□□□□ -2.17
VPS35YJL154C YAE1P47118 141 aaPredicted RBP1.47□□□□□ -2.17
VPS35YJL154C BXI1P48558 297 aa1.47□□□□□ -2.17
VPS35YJL154C RPS12P48589 143 aaKnown RBP1.47□□□□□ -2.17
VPS35YJL154C AAH1P53909 347 aa1.47□□□□□ -2.17
VPS35YJL154C COF1Q03048 143 aaKnown RBP1.47□□□□□ -2.17
VPS35YJL154C CGI121Q03705 181 aaKnown RBP1.47□□□□□ -2.17
VPS35YJL154C HPT1Q04178 221 aaKnown RBP1.47□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms