RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 SYTL5Q8TDW5 730 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-227ENST00000640648 CHURC1Q8WUH1 139 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 ZFYVE19Q96K21 471 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 CSRNP1Q96S65 589 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 TMEM47Q9BQJ4 181 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 UBE2TQ9NPD8 197 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-227ENST00000640648 SMARCAL1Q9NZC9 954 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 PSMC3IPQ9P2W1 217 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-227ENST00000640648 PHTF1Q9UMS5 762 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 TSPOAP1O95153 1857 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 LRRIQ4A6NIV6 560 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 ERVV-1B6SEH8 477 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 TCP10L2B9ZVM9 353 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 VCLP18206 1134 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 RUNX1T1Q06455 604 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 ZNF423Q2M1K9 1284 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 FAM83BQ5T0W9 1011 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 HEATR4Q86WZ0 1026 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 OR6Y1Q8NGX8 325 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 PLEKHO2Q8TD55 490 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 IGDCC4Q8TDY8 1250 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 CAPSLQ8WWF8 208 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 POMGNT1Q8WZA1 660 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 STN1Q9H668 368 aaKnown RBP8.64□□□□□ -1.03
NECAP1-227ENST00000640648 DCP1AQ9NPI6 582 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-227ENST00000640648 AGPAT5Q9NUQ2 364 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 PCMTD2Q9NV79 361 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 TMEM260Q9NX78 707 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 SRP68Q9UHB9 627 aaKnown RBP8.64□□□□□ -1.03
NECAP1-227ENST00000640648 SLC12A4Q9UP95 1085 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 PTPRMP28827 1452 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 ATP2B4P23634 1241 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 GNG2P59768 71 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 NCALDP61601 193 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 BFSP1Q12934 665 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 PDK3Q15120 406 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 OASLQ15646 514 aaKnown RBP8.64□□□□□ -1.03
NECAP1-227ENST00000640648 ELMSAN1Q6PJG2 1045 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 TTC30AQ86WT1 665 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 MARCH10Q8NA82 808 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-227ENST00000640648 SH3RF3Q8TEJ3 882 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-227ENST00000640648 TP53INP1Q96A56 240 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 ISCA1Q9BUE6 129 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 DHX36Q9H2U1 1008 aaKnown RBP8.64□□□□□ -1.03
NECAP1-227ENST00000640648 PADI4Q9UM07 663 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 XDHP47989 1333 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 A0A1W2PRG6 482 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 H2AFYO75367 372 aaKnown RBP8.64□□□□□ -1.03
NECAP1-227ENST00000640648 DDHD2O94830 711 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 NUDT17P0C025 328 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 HOXA13P31271 388 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-227ENST00000640648 LIG4P49917 911 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 SERPINB9P50453 376 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 SCNN1BP51168 640 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 USP11P51784 963 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 ATP2C1P98194 919 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-227ENST00000640648 MYBPC3Q14896 1274 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 SF3B3Q15393 1217 aaKnown RBP8.64□□□□□ -1.03
NECAP1-227ENST00000640648 ALX1Q15699 326 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 NAB2Q15742 525 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 IKBIPQ70UQ0 350 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 SLC17A8Q8NDX2 589 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 L3MBTL3Q96JM7 780 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-227ENST00000640648 THTPAQ9BU02 230 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 TEKT3Q9BXF9 490 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 MLXIPLQ9NP71 852 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 CEP152O94986 1710 aa8.64□□□□□ -1.03
NECAP1-227ENST00000640648 HTR3EA5X5Y0 456 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 HNRNPCL2B2RXH8 293 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 SRGAP2CP0DJJ0 459 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 SRGAP2BP0DMP2 458 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 ZNF18P17022 549 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 OXCT1P55809 520 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 IGBP1P78318 339 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 AOC3Q16853 763 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 SRBD1Q8N5C6 995 aaKnown RBP8.63□□□□□ -1.03
NECAP1-227ENST00000640648 AGAP3Q96P47 875 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 MLPHQ9BV36 600 aaPredicted RBP8.63□□□□□ -1.03
NECAP1-227ENST00000640648 MARCH7Q9H992 704 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 MRPL47Q9HD33 250 aaKnown RBP8.63□□□□□ -1.03
NECAP1-227ENST00000640648 SLC24A2Q9UI40 661 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 SALL3Q9BXA9 1300 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 USP17L5A8MUK1 530 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 HNRNPDLO14979 420 aaKnown RBP8.63□□□□□ -1.03
NECAP1-227ENST00000640648 DAPK3O43293 454 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 CRCPO75575 148 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 WDR47O94967 919 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 TKTP29401 623 aaKnown RBP8.63□□□□□ -1.03
NECAP1-227ENST00000640648 MAPK4P31152 587 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 USP4Q13107 963 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 ZNF211Q13398 564 aaPredicted RBP8.63□□□□□ -1.03
NECAP1-227ENST00000640648 SCYL2Q6P3W7 929 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 LARGE2Q8N3Y3 721 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 DEPTORQ8TB45 409 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 CIDECQ96AQ7 238 aaPredicted RBP8.63□□□□□ -1.03
NECAP1-227ENST00000640648 CDCA5Q96FF9 252 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 CEP44Q9C0F1 390 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 PNPLA3Q9NST1 481 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 RBM12Q9NTZ6 932 aaKnown RBP8.63□□□□□ -1.03
NECAP1-227ENST00000640648 TRMT6Q9UJA5 497 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms