RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 CDK5RAP2Q96SN8 1893 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 WRBO00258 174 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 KCNN4O15554 427 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 SYNCRIPO60506 623 aaKnown RBP4.51□□□□□ -1.69
SCN3A-209ENST00000639244 LIFRP42702 1097 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 ME1P48163 572 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 KCNJ10P78508 379 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 STX1AQ16623 288 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 MIB1Q86YT6 1006 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 CHAC2Q8WUX2 184 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 DEPDC1BQ8WUY9 529 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 ZNF274Q96GC6 653 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-209ENST00000639244 FAM20AQ96MK3 541 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 HMG20BQ9P0W2 317 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 SLC7A8Q9UHI5 535 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 RUVBL1Q9Y265 456 aaKnown RBP4.51□□□□□ -1.69
SCN3A-209ENST00000639244 NOX1Q9Y5S8 564 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 FPGT-TNNI3KV9GXZ4 949 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 MROH5Q6ZUA9 1318 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 A0A1W2PRG0 241 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 C2orf74A8MZ97 194 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 FAM25AB3EWG3 89 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 FAM25CB3EWG5 89 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 FAM25GB3EWG6 89 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 ZNF879B4DU55 563 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 H3BQF6 201 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 H3BRJ5 948 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 TFRCP02786 760 aaKnown RBP4.51□□□□□ -1.69
SCN3A-209ENST00000639244 PRG2P13727 222 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 SLC26A5P58743 744 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 FRA10AC1Q70Z53 315 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 TRIM59Q8IWR1 403 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 ZCCHC2Q9C0B9 1178 aaKnown RBP4.51□□□□□ -1.69
SCN3A-209ENST00000639244 ZNF287Q9HBT7 754 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 METTL5Q9NRN9 209 aaKnown RBP4.51□□□□□ -1.69
SCN3A-209ENST00000639244 TXLNGQ9NUQ3 528 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 UBA2Q9UBT2 640 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-209ENST00000639244 TRAF5O00463 557 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 ALADP13716 330 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 ZNF33BQ06732 778 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 C5orf22Q49AR2 442 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 SHEQ5VZ18 495 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 ALG1LQ6GMV1 187 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 LRRC8BQ6P9F7 803 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 FAM124AQ86V42 546 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 NRSN1Q8IZ57 195 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 MLKLQ8NB16 471 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 ZBTB44Q8NCP5 570 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 TTLL11Q8NHH1 800 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 SRCIN1Q9C0H9 1055 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 LSG1Q9H089 658 aaKnown RBP4.51□□□□□ -1.69
SCN3A-209ENST00000639244 PRDM11Q9NQV5 511 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 FAIMQ9NVQ4 179 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 TMOD2Q9NZR1 351 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 ERCC6Q03468 1493 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 LOC105371267A0A1B0GV96 52 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 TYW5A2RUC4 315 aaKnown RBP4.51□□□□□ -1.69
SCN3A-209ENST00000639244 H0YJX3 145 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 HMOX1P09601 288 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 CALB2P22676 271 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 RGS19P49795 217 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 ETF1P62495 437 aaKnown RBP4.51□□□□□ -1.69
SCN3A-209ENST00000639244 ARF5P84085 180 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 PLOD1Q02809 727 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-209ENST00000639244 RNASELQ05823 741 aaKnown RBP4.51□□□□□ -1.69
SCN3A-209ENST00000639244 C2orf54Q08AI8 447 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 PLD5Q8N7P1 536 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 ARRDC4Q8NCT1 418 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 TMA16Q96EY4 203 aaKnown RBP4.51□□□□□ -1.69
SCN3A-209ENST00000639244 TRIM47Q96LD4 638 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 OLFM1Q99784 485 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 MRM3Q9HC36 420 aaKnown RBP4.51□□□□□ -1.69
SCN3A-209ENST00000639244 ZNF536O15090 1300 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 A0A0B4J269 797 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 PSDA5PKW4 1024 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-209ENST00000639244 CCDC160A6NGH7 325 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 A8MXQ7 604 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 CRTAMO95727 393 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 IL6P05231 212 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 POU2F1P14859 743 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 RPS6KB1P23443 525 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 F8A1P23610 371 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 EIF4A3P38919 411 aaKnown RBP4.5□□□□□ -1.69
SCN3A-209ENST00000639244 CCNG1P51959 295 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 PSMD4P55036 377 aaKnown RBP4.5□□□□□ -1.69
SCN3A-209ENST00000639244 PHC1P78364 1004 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 TAP1Q03518 808 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 KLHL24Q6TFL4 600 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 RANBP10Q6VN20 620 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 CDKL3Q8IVW4 592 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-209ENST00000639244 MAGEB6Q8N7X4 407 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 ATP6V0D2Q8N8Y2 350 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 TMEM60Q9H2L4 133 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 EPS8L2Q9H6S3 715 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 HAUS2Q9NVX0 235 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 CHORDC1Q9UHD1 332 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-209ENST00000639244 GTF2IRD1Q9UHL9 959 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 TRIM33Q9UPN9 1127 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 IFIT3O14879 490 aaKnown RBP4.5□□□□□ -1.69
SCN3A-209ENST00000639244 HDCP19113 662 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms