RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 PAICSP22234 425 aaKnown RBP20.14■□□□□ 0.81
CACNA1A-257ENST00000638009 NCAPHQ15003 741 aa20.14■□□□□ 0.81
CACNA1A-257ENST00000638009 AKAP7Q9P0M2 348 aaPredicted RBP20.14■□□□□ 0.81
CACNA1A-257ENST00000638009 CASZ1Q86V15 1759 aa20.14■□□□□ 0.81
CACNA1A-257ENST00000638009 UBE2QL1A1L167 161 aa20.14■□□□□ 0.81
CACNA1A-257ENST00000638009 KCNT1Q5JUK3 1230 aa20.14■□□□□ 0.81
CACNA1A-257ENST00000638009 HEATR4Q86WZ0 1026 aa20.14■□□□□ 0.81
CACNA1A-257ENST00000638009 UBASH3BQ8TF42 649 aa20.14■□□□□ 0.81
CACNA1A-257ENST00000638009 ALOX15P16050 662 aaPredicted RBP20.14■□□□□ 0.81
CACNA1A-257ENST00000638009 YWHAQP27348 245 aa20.14■□□□□ 0.81
CACNA1A-257ENST00000638009 HIRAP54198 1017 aaPredicted RBP20.14■□□□□ 0.81
CACNA1A-257ENST00000638009 APBB2Q92870 758 aa20.14■□□□□ 0.81
CACNA1A-257ENST00000638009 RACGAP1Q9H0H5 632 aa20.14■□□□□ 0.81
CACNA1A-257ENST00000638009 ATP6V1HQ9UI12 483 aa20.14■□□□□ 0.81
CACNA1A-257ENST00000638009 CDH6P55285 790 aa20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 DGUOKQ16854 277 aa20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 AGAP9Q5VTM2 703 aa20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 FAM160B2Q86V87 743 aa20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 SETD9Q8NE22 299 aa20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 LSM7Q9UK45 103 aaKnown RBP20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 COQ6Q9Y2Z9 468 aa20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 GSTM1P09488 218 aa20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 UBE3CQ15386 1083 aa20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 RUNDC3AQ59EK9 446 aa20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 TWF2Q6IBS0 349 aaKnown RBP20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 RFFLQ8WZ73 363 aa20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 MGAT4AQ9UM21 535 aa20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 RPAP1Q9BWH6 1393 aaPredicted RBP20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 KIAA0100Q14667 2235 aaKnown RBP20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 SCRN1Q12765 414 aa20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 ZFP1Q6P2D0 407 aa20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 SUGP1Q8IWZ8 645 aaKnown RBP20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 BTBD7Q9P203 1132 aa20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 TEX14Q8IWB6 1497 aa20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 TKTP29401 623 aaKnown RBP20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 GPC3P51654 580 aa20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 CHRNA2Q15822 529 aa20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 JADE3Q92613 823 aa20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 CENPLQ8N0S6 344 aaPredicted RBP20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 ZNF560Q96MR9 790 aa20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 WDR35Q9P2L0 1181 aa20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 FANCAO15360 1455 aa20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 SOAT2O75908 522 aa20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 EZH2Q15910 746 aaKnown RBP20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 NEK5Q6P3R8 708 aa20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 AGR3Q8TD06 166 aa20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 ILKAPQ9H0C8 392 aaPredicted RBP20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 TASP1Q9H6P5 420 aa20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 EFCAB10A6NFE3 127 aa20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 DUOXA2Q1HG44 320 aa20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 TBCKQ8TEA7 893 aa20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 PPP1R36Q96LQ0 422 aa20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 CLIC6Q96NY7 704 aa20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 PYCARDQ9ULZ3 195 aa20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 GSTK1Q9Y2Q3 226 aa20.13■□□□□ 0.81
CACNA1A-257ENST00000638009 ADGRA2Q96PE1 1338 aa20.12■□□□□ 0.81
CACNA1A-257ENST00000638009 FGAP02671 866 aa20.12■□□□□ 0.81
CACNA1A-257ENST00000638009 EIF3EP60228 445 aaKnown RBP20.12■□□□□ 0.81
CACNA1A-257ENST00000638009 COBLL1Q53SF7 1204 aa20.12■□□□□ 0.81
CACNA1A-257ENST00000638009 FAM102AQ5T9C2 384 aaPredicted RBP20.12■□□□□ 0.81
CACNA1A-257ENST00000638009 RASSF6Q6ZTQ3 369 aa20.12■□□□□ 0.81
CACNA1A-257ENST00000638009 EFCAB1Q9HAE3 211 aa20.12■□□□□ 0.81
CACNA1A-257ENST00000638009 PCDHGA4Q9Y5G9 962 aa20.12■□□□□ 0.81
CACNA1A-257ENST00000638009 SHROOM2Q13796 1616 aa20.12■□□□□ 0.81
CACNA1A-257ENST00000638009 TNFAIP8O95379 198 aa20.12■□□□□ 0.81
CACNA1A-257ENST00000638009 NFIAQ12857 509 aa20.12■□□□□ 0.81
CACNA1A-257ENST00000638009 CBFBQ13951 182 aa20.12■□□□□ 0.81
CACNA1A-257ENST00000638009 SNX17Q15036 470 aa20.12■□□□□ 0.81
CACNA1A-257ENST00000638009 LLGL1Q15334 1064 aa20.12■□□□□ 0.81
CACNA1A-257ENST00000638009 ALFQ53S48 1182 aa20.12■□□□□ 0.81
CACNA1A-257ENST00000638009 MRPL4Q9BYD3 311 aaKnown RBP20.12■□□□□ 0.81
CACNA1A-257ENST00000638009 GTF2A1LQ9UNN4 478 aa20.12■□□□□ 0.81
CACNA1A-257ENST00000638009 EDC4Q6P2E9 1401 aaKnown RBP20.12■□□□□ 0.81
CACNA1A-257ENST00000638009 MYL4P12829 197 aa20.12■□□□□ 0.81
CACNA1A-257ENST00000638009 AP1S1P61966 158 aa20.12■□□□□ 0.81
CACNA1A-257ENST00000638009 ZNF318Q5VUA4 2279 aa20.12■□□□□ 0.81
CACNA1A-257ENST00000638009 MYO3BQ8WXR4 1341 aa20.12■□□□□ 0.81
CACNA1A-257ENST00000638009 STAT3P40763 770 aa20.12■□□□□ 0.81
CACNA1A-257ENST00000638009 ZAP70P43403 619 aa20.12■□□□□ 0.81
CACNA1A-257ENST00000638009 ULK3Q6PHR2 472 aa20.12■□□□□ 0.81
CACNA1A-257ENST00000638009 PDIA3P30101 505 aaKnown RBP20.12■□□□□ 0.81
CACNA1A-257ENST00000638009 EPB41L4BQ9H329 900 aa20.12■□□□□ 0.81
CACNA1A-257ENST00000638009 ZNF304Q9HCX3 659 aa20.12■□□□□ 0.81
CACNA1A-257ENST00000638009 TRIM43BA6NCK2 446 aa20.12■□□□□ 0.81
CACNA1A-257ENST00000638009 RAPGEF3O95398 923 aa20.12■□□□□ 0.81
CACNA1A-257ENST00000638009 AP3B2Q13367 1082 aa20.12■□□□□ 0.81
CACNA1A-257ENST00000638009 PNMA6FA0A0J9YX94 578 aa20.11■□□□□ 0.81
CACNA1A-257ENST00000638009 CCT8L1PA6NM43 557 aa20.11■□□□□ 0.81
CACNA1A-257ENST00000638009 CNPP09543 421 aaKnown RBP20.11■□□□□ 0.81
CACNA1A-257ENST00000638009 LSP1P33241 339 aa20.11■□□□□ 0.81
CACNA1A-257ENST00000638009 RPS8P62241 208 aaKnown RBP20.11■□□□□ 0.81
CACNA1A-257ENST00000638009 SEC16BQ96JE7 1060 aa20.11■□□□□ 0.81
CACNA1A-257ENST00000638009 DSN1Q9H410 356 aa20.11■□□□□ 0.81
CACNA1A-257ENST00000638009 PCIF1Q9H4Z3 704 aa20.11■□□□□ 0.81
CACNA1A-257ENST00000638009 ITIH2P19823 946 aa20.11■□□□□ 0.81
CACNA1A-257ENST00000638009 TTKP33981 857 aa20.11■□□□□ 0.81
CACNA1A-257ENST00000638009 KIZQ2M2Z5 673 aa20.11■□□□□ 0.81
CACNA1A-257ENST00000638009 PTRHD1Q6GMV3 140 aaKnown RBP20.11■□□□□ 0.81
CACNA1A-257ENST00000638009 EID3Q8N140 333 aa20.11■□□□□ 0.81
CACNA1A-257ENST00000638009 ZNF624Q9P2J8 865 aaPredicted RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms