RNA–Protein interactions for RNA: ENST00000637968.1

SCN1A-216, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,614 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-216ENST00000637968 CLVS2Q5SYC1 327 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 KLHDC7AQ5VTJ3 777 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 ADAT2Q7Z6V5 191 aaKnown RBP6□□□□□ -1.45
SCN1A-216ENST00000637968 LZTR1Q8N653 840 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 ANKRD53Q8N9V6 530 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 EXD1Q8NHP7 514 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 TTC25Q96NG3 672 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 AGPAT5Q9NUQ2 364 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 ZNHIT2Q9UHR6 403 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 SMG5Q9UPR3 1016 aaKnown RBP6□□□□□ -1.45
SCN1A-216ENST00000637968 SIK3Q9Y2K2 1263 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 ITM2AO43736 263 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 UGT1A9O60656 530 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 CDH16O75309 829 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 TAF5LO75529 589 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 MTA2O94776 668 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 FGGP02679 453 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 UGT1A6P19224 532 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 POLR2CP19387 275 aaPredicted RBP6□□□□□ -1.45
SCN1A-216ENST00000637968 UGT1A1P22309 533 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 UGT1A4P22310 534 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 UGT1A3P35503 534 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 UGT1A5P35504 534 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 NAMPTP43490 491 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 BAG6P46379 1132 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 CPA2P48052 419 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 SERPINB10P48595 397 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 PMS1P54277 932 aaKnown RBP6□□□□□ -1.45
SCN1A-216ENST00000637968 KDSRQ06136 332 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 ZNF846Q147U1 533 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 SF3B4Q15427 424 aaKnown RBP eCLIP6□□□□□ -1.45
SCN1A-216ENST00000637968 HERC4Q5GLZ8 1057 aaPredicted RBP6□□□□□ -1.45
SCN1A-216ENST00000637968 ZNF772Q68DY9 489 aaPredicted RBP6□□□□□ -1.45
SCN1A-216ENST00000637968 ZNF746Q6NUN9 644 aaPredicted RBP6□□□□□ -1.45
SCN1A-216ENST00000637968 ISLR2Q6UXK2 745 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 AHI1Q8N157 1196 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 UBL4BQ8N7F7 174 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 KRT35Q92764 455 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 PAGE5Q96GU1 130 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 SERPINI1Q99574 410 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 IER2Q9BTL4 223 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 UGT1A7Q9HAW7 530 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 UGT1A10Q9HAW8 530 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 UGT1A8Q9HAW9 530 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 C12orf10Q9HB07 376 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 DCAF16Q9NXF7 216 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 IL20Q9NYY1 176 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 UBA2Q9UBT2 640 aaPredicted RBP6□□□□□ -1.45
SCN1A-216ENST00000637968 MYRFQ9Y2G1 1151 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 ADGRL2O95490 1459 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 CENPXA8MT69 81 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 RNASEH2AO75792 299 aaKnown RBP6□□□□□ -1.45
SCN1A-216ENST00000637968 BBOX1O75936 387 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 KLHL2O95198 593 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 FKBP9O95302 570 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 GSNP06396 782 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 DBTP11182 482 aaKnown RBP6□□□□□ -1.45
SCN1A-216ENST00000637968 RCVRNP35243 200 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 ZNF200P98182 395 aaPredicted RBP6□□□□□ -1.45
SCN1A-216ENST00000637968 CDK18Q07002 472 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 TRADDQ15628 312 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 MEA1Q16626 185 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 C5orf22Q49AR2 442 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 C6orf10Q5SRN2 563 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 MICU3Q86XE3 530 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 ASCC1Q8N9N2 400 aaKnown RBP6□□□□□ -1.45
SCN1A-216ENST00000637968 TTC13Q8NBP0 860 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 MAML1Q92585 1016 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 UTP4Q969X6 686 aaKnown RBP6□□□□□ -1.45
SCN1A-216ENST00000637968 CCDC124Q96CT7 223 aaKnown RBP6□□□□□ -1.45
SCN1A-216ENST00000637968 CNOT6LQ96LI5 555 aaKnown RBP6□□□□□ -1.45
SCN1A-216ENST00000637968 CIB1Q99828 191 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 EMILIN2Q9BXX0 1053 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 AVENQ9NQS1 362 aaPredicted RBP6□□□□□ -1.45
SCN1A-216ENST00000637968 TCEAL9Q9UHQ7 104 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 DNAJC12Q9UKB3 198 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 ARHGEF10O15013 1369 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 KCNJ13O60928 360 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 USP1O94782 785 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 IFNA16P05015 189 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 ABCB1P08183 1280 aaPredicted RBP6□□□□□ -1.45
SCN1A-216ENST00000637968 ACTN1P12814 892 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 MCM7P33993 719 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 TRIM23P36406 574 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 FDFT1P37268 417 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 TRAF2Q12933 501 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 SNAP47Q5SQN1 464 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 OGFOD2Q6N063 350 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 PDSS2Q86YH6 399 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 FOXP4Q8IVH2 680 aaPredicted RBP6□□□□□ -1.45
SCN1A-216ENST00000637968 ZNF579Q8NAF0 562 aaKnown RBP6□□□□□ -1.45
SCN1A-216ENST00000637968 MIGA1Q8NAN2 632 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 ZNF398Q8TD17 642 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 BRSK1Q8TDC3 778 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 ACTRT1Q8TDG2 376 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 NRG4Q8WWG1 115 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 JDP2Q8WYK2 163 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 RMND5BQ96G75 393 aaPredicted RBP6□□□□□ -1.45
SCN1A-216ENST00000637968 FAR2Q96K12 515 aa6□□□□□ -1.45
SCN1A-216ENST00000637968 TMEM79Q9BSE2 394 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms