RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 MATR3P43243 847 aaKnown RBP eCLIP8.48□□□□□ -1.05
PNKP-229ENST00000637897 GPR15P49685 360 aa8.48□□□□□ -1.05
PNKP-229ENST00000637897 NUBP1P53384 320 aa8.48□□□□□ -1.05
PNKP-229ENST00000637897 TMEM132DQ14C87 1099 aa8.48□□□□□ -1.05
PNKP-229ENST00000637897 TEAD2Q15562 447 aa8.48□□□□□ -1.05
PNKP-229ENST00000637897 SLC44A4Q53GD3 710 aa8.48□□□□□ -1.05
PNKP-229ENST00000637897 LMBRD2Q68DH5 695 aaPredicted RBP8.48□□□□□ -1.05
PNKP-229ENST00000637897 CNNM4Q6P4Q7 775 aa8.48□□□□□ -1.05
PNKP-229ENST00000637897 VITQ6UXI7 678 aa8.48□□□□□ -1.05
PNKP-229ENST00000637897 LIMS2Q7Z4I7 341 aa8.48□□□□□ -1.05
PNKP-229ENST00000637897 FRMD5Q7Z6J6 570 aa8.48□□□□□ -1.05
PNKP-229ENST00000637897 APPL2Q8NEU8 664 aa8.48□□□□□ -1.05
PNKP-229ENST00000637897 OR5B17Q8NGF7 314 aa8.48□□□□□ -1.05
PNKP-229ENST00000637897 PLEKHO2Q8TD55 490 aa8.48□□□□□ -1.05
PNKP-229ENST00000637897 ANP32BQ92688 251 aaKnown RBP8.48□□□□□ -1.05
PNKP-229ENST00000637897 ATOH1Q92858 354 aaPredicted RBP8.48□□□□□ -1.05
PNKP-229ENST00000637897 HVCN1Q96D96 273 aa8.48□□□□□ -1.05
PNKP-229ENST00000637897 CHFRQ96EP1 664 aa8.48□□□□□ -1.05
PNKP-229ENST00000637897 LPIN3Q9BQK8 851 aa8.48□□□□□ -1.05
PNKP-229ENST00000637897 FAM213AQ9BRX8 229 aa8.48□□□□□ -1.05
PNKP-229ENST00000637897 ZCWPW1Q9H0M4 648 aa8.48□□□□□ -1.05
PNKP-229ENST00000637897 TSPY26PQ9H489 355 aa8.48□□□□□ -1.05
PNKP-229ENST00000637897 PCIF1Q9H4Z3 704 aa8.48□□□□□ -1.05
PNKP-229ENST00000637897 MRPL44Q9H9J2 332 aaKnown RBP8.48□□□□□ -1.05
PNKP-229ENST00000637897 PDE11AQ9HCR9 933 aa8.48□□□□□ -1.05
PNKP-229ENST00000637897 PANK4Q9NVE7 773 aa8.48□□□□□ -1.05
PNKP-229ENST00000637897 DPP3Q9NY33 737 aa8.48□□□□□ -1.05
PNKP-229ENST00000637897 GDE1Q9NZC3 331 aa8.48□□□□□ -1.05
PNKP-229ENST00000637897 RCOR1Q9UKL0 485 aa8.48□□□□□ -1.05
PNKP-229ENST00000637897 FBXL21Q9UKT6 434 aa8.48□□□□□ -1.05
PNKP-229ENST00000637897 PCDHA7Q9UN72 937 aa8.48□□□□□ -1.05
PNKP-229ENST00000637897 DERAQ9Y315 318 aa8.48□□□□□ -1.05
PNKP-229ENST00000637897 ZFP37Q9Y6Q3 630 aaPredicted RBP8.48□□□□□ -1.05
PNKP-229ENST00000637897 PATJQ8NI35 1801 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 SPTBN4Q9H254 2564 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 DENND4CQ5VZ89 1909 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 PRR23AA6NEV1 266 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 CYB561D2O14569 222 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 PRRG1O14668 218 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 KLRC4O43908 158 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 ECI2O75521 394 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 TADA3O75528 432 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 MICAL2O94851 1124 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 GCNT3O95395 438 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 YEATS4O95619 227 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 LRG1P02750 347 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 IDEP14735 1019 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 HMGA1P17096 107 aaKnown RBP8.47□□□□□ -1.05
PNKP-229ENST00000637897 GAP43P17677 238 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 GARTP22102 1010 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 SCP2P22307 547 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 TARSP26639 723 aaKnown RBP8.47□□□□□ -1.05
PNKP-229ENST00000637897 STAT6P42226 847 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 POU5F1Q01860 360 aaKnown RBP8.47□□□□□ -1.05
PNKP-229ENST00000637897 MYBPC2Q14324 1141 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 GAS6Q14393 721 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 GRM2Q14416 872 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 ANGPT1Q15389 498 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 MLF2Q15773 248 aaPredicted RBP8.47□□□□□ -1.05
PNKP-229ENST00000637897 KYAT1Q16773 422 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 OVOS1Q6IE37 1185 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 SLFN12LQ6IEE8 588 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 ELMSAN1Q6PJG2 1045 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 DSTYKQ6XUX3 929 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 CCDC73Q6ZRK6 1079 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 DNAJB7Q7Z6W7 309 aaPredicted RBP8.47□□□□□ -1.05
PNKP-229ENST00000637897 CBWD2Q8IUF1 395 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 CD302Q8IX05 232 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 GRAMD1CQ8IYS0 662 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 PJA1Q8NG27 643 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 RASSF8Q8NHQ8 419 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 ZNF507Q8TCN5 953 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 SCFD1Q8WVM8 642 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 POMGNT1Q8WZA1 660 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 ZNF516Q92618 1163 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 ELSPBP1Q96BH3 223 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 DHX58Q96C10 678 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 ACCSQ96QU6 501 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 TSPAN18Q96SJ8 248 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 PRRX2Q99811 253 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 C7orf25Q9BPX7 421 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 MFSD1Q9H3U5 465 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 TRPV4Q9HBA0 871 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 HEBP1Q9NRV9 189 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 SEL1LQ9UBV2 794 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 CCDC39Q9UFE4 941 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 L1RE1Q9UN81 338 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 OBSL1O75147 1896 aa8.47□□□□□ -1.05
PNKP-229ENST00000637897 KIF26AQ9ULI4 1882 aaPredicted RBP8.47□□□□□ -1.05
PNKP-229ENST00000637897 TICRRQ7Z2Z1 1910 aa8.46□□□□□ -1.05
PNKP-229ENST00000637897 WDR87Q6ZQQ6 2873 aa8.46□□□□□ -1.05
PNKP-229ENST00000637897 A0A1W2PRU2 124 aa8.46□□□□□ -1.06
PNKP-229ENST00000637897 KANSL1LA0AUZ9 987 aa8.46□□□□□ -1.06
PNKP-229ENST00000637897 OR6C75A6NL08 312 aa8.46□□□□□ -1.06
PNKP-229ENST00000637897 ACTN4O43707 911 aaKnown RBP8.46□□□□□ -1.06
PNKP-229ENST00000637897 CUTAO60888 179 aa8.46□□□□□ -1.06
PNKP-229ENST00000637897 PRAMEF12O95522 483 aa8.46□□□□□ -1.06
PNKP-229ENST00000637897 MYL4P12829 197 aa8.46□□□□□ -1.06
PNKP-229ENST00000637897 TDGF1P13385 188 aa8.46□□□□□ -1.06
PNKP-229ENST00000637897 CPB1P15086 417 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms