RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 SLC4A11Q8NBS3 891 aa11.39□□□□□ -0.59
CLN5-213ENST00000636681 RBBP8NLQ8NC74 664 aaPredicted RBP11.39□□□□□ -0.59
CLN5-213ENST00000636681 AUTS2Q8WXX7 1259 aa11.39□□□□□ -0.59
CLN5-213ENST00000636681 TFAP2BQ92481 460 aa11.39□□□□□ -0.59
CLN5-213ENST00000636681 DDX27Q96GQ7 796 aaKnown RBP11.39□□□□□ -0.59
CLN5-213ENST00000636681 RAD9AQ99638 391 aa11.39□□□□□ -0.59
CLN5-213ENST00000636681 CERS4Q9HA82 394 aa11.39□□□□□ -0.59
CLN5-213ENST00000636681 ARHGAP20Q9P2F6 1191 aa11.39□□□□□ -0.59
CLN5-213ENST00000636681 IMPACTQ9P2X3 320 aa11.39□□□□□ -0.59
CLN5-213ENST00000636681 ADAM28Q9UKQ2 775 aa11.39□□□□□ -0.59
CLN5-213ENST00000636681 SOWAHDA6NJG2 315 aa11.39□□□□□ -0.59
CLN5-213ENST00000636681 HUS1O60921 280 aa11.39□□□□□ -0.59
CLN5-213ENST00000636681 OR4Q2P0C623 313 aa11.39□□□□□ -0.59
CLN5-213ENST00000636681 BRD2P25440 801 aaKnown RBP11.39□□□□□ -0.59
CLN5-213ENST00000636681 RAD23BP54727 409 aa11.39□□□□□ -0.59
CLN5-213ENST00000636681 CCZ1BP86790 482 aa11.39□□□□□ -0.59
CLN5-213ENST00000636681 CCZ1P86791 482 aaPredicted RBP11.39□□□□□ -0.59
CLN5-213ENST00000636681 TRIM14Q14142 442 aa11.39□□□□□ -0.59
CLN5-213ENST00000636681 FAM171A1Q5VUB5 890 aa11.39□□□□□ -0.59
CLN5-213ENST00000636681 SFMBT2Q5VUG0 894 aa11.39□□□□□ -0.59
CLN5-213ENST00000636681 FUT10Q6P4F1 479 aa11.39□□□□□ -0.59
CLN5-213ENST00000636681 PRSS55Q6UWB4 352 aaPredicted RBP11.39□□□□□ -0.59
CLN5-213ENST00000636681 CHRDL2Q6WN34 429 aa11.39□□□□□ -0.59
CLN5-213ENST00000636681 ACOT1Q86TX2 421 aa11.39□□□□□ -0.59
CLN5-213ENST00000636681 NOP9Q86U38 636 aaKnown RBP11.39□□□□□ -0.59
CLN5-213ENST00000636681 CEP57Q86XR8 500 aa11.39□□□□□ -0.59
CLN5-213ENST00000636681 LRRC8AQ8IWT6 810 aa11.39□□□□□ -0.59
CLN5-213ENST00000636681 ADGRF2Q8IZF7 708 aa11.39□□□□□ -0.59
CLN5-213ENST00000636681 SLC39A11Q8N1S5 342 aa11.39□□□□□ -0.59
CLN5-213ENST00000636681 PIAS4Q8N2W9 510 aaPredicted RBP11.39□□□□□ -0.59
CLN5-213ENST00000636681 FIBCD1Q8N539 461 aa11.39□□□□□ -0.59
CLN5-213ENST00000636681 APPL2Q8NEU8 664 aa11.39□□□□□ -0.59
CLN5-213ENST00000636681 OR8K1Q8NGG5 319 aa11.39□□□□□ -0.59
CLN5-213ENST00000636681 OR6B3Q8NGW1 331 aa11.39□□□□□ -0.59
CLN5-213ENST00000636681 IGSF21Q96ID5 467 aa11.39□□□□□ -0.59
CLN5-213ENST00000636681 SUSD3Q96L08 255 aa11.39□□□□□ -0.59
CLN5-213ENST00000636681 UROC1Q96N76 676 aa11.39□□□□□ -0.59
CLN5-213ENST00000636681 HAUS4Q9H6D7 363 aa11.39□□□□□ -0.59
CLN5-213ENST00000636681 INSL6Q9Y581 213 aa11.39□□□□□ -0.59
CLN5-213ENST00000636681 LINC01553A4QN01 128 aa11.38□□□□□ -0.59
CLN5-213ENST00000636681 M0QZQ0 153 aa11.38□□□□□ -0.59
CLN5-213ENST00000636681 CILPO75339 1184 aa11.38□□□□□ -0.59
CLN5-213ENST00000636681 EFEMP2O95967 443 aa11.38□□□□□ -0.59
CLN5-213ENST00000636681 CHRNB2P17787 502 aa11.38□□□□□ -0.59
CLN5-213ENST00000636681 RPL17P18621 184 aaKnown RBP11.38□□□□□ -0.59
CLN5-213ENST00000636681 TBXAS1P24557 533 aaPredicted RBP11.38□□□□□ -0.59
CLN5-213ENST00000636681 PNPLA4P41247 253 aa11.38□□□□□ -0.59
CLN5-213ENST00000636681 STAT1P42224 750 aa11.38□□□□□ -0.59
CLN5-213ENST00000636681 ALDH7A1P49419 539 aaKnown RBP11.38□□□□□ -0.59
CLN5-213ENST00000636681 ZNF132P52740 706 aa11.38□□□□□ -0.59
CLN5-213ENST00000636681 ASIC2Q16515 512 aa11.38□□□□□ -0.59
CLN5-213ENST00000636681 RSPO2Q6UXX9 243 aaPredicted RBP11.38□□□□□ -0.59
CLN5-213ENST00000636681 RAD9BQ6WBX8 426 aa11.38□□□□□ -0.59
CLN5-213ENST00000636681 DPH6Q7L8W6 267 aa11.38□□□□□ -0.59
CLN5-213ENST00000636681 ZNF571Q7Z3V5 609 aaPredicted RBP11.38□□□□□ -0.59
CLN5-213ENST00000636681 SP7Q8TDD2 431 aaPredicted RBP11.38□□□□□ -0.59
CLN5-213ENST00000636681 ZNF558Q96NG5 402 aa11.38□□□□□ -0.59
CLN5-213ENST00000636681 TMEM175Q9BSA9 504 aa11.38□□□□□ -0.59
CLN5-213ENST00000636681 PCDHGC5Q9Y5F6 944 aa11.38□□□□□ -0.59
CLN5-213ENST00000636681 PLXNA3P51805 1871 aa11.38□□□□□ -0.59
CLN5-213ENST00000636681 A0A0U1RQJ8 604 aa11.37□□□□□ -0.59
CLN5-213ENST00000636681 TMEM189-UBE2V1I3L0A0 370 aa11.37□□□□□ -0.59
CLN5-213ENST00000636681 C2CD2LO14523 706 aa11.37□□□□□ -0.59
CLN5-213ENST00000636681 MMEP08473 750 aa11.37□□□□□ -0.59
CLN5-213ENST00000636681 DNAJB1P25685 340 aa11.37□□□□□ -0.59
CLN5-213ENST00000636681 GNL1P36915 607 aaPredicted RBP11.37□□□□□ -0.59
CLN5-213ENST00000636681 EIF4A3P38919 411 aaKnown RBP11.37□□□□□ -0.59
CLN5-213ENST00000636681 PTK2Q05397 1052 aa11.37□□□□□ -0.59
CLN5-213ENST00000636681 INCA1Q0VD86 236 aa11.37□□□□□ -0.59
CLN5-213ENST00000636681 CNGA4Q8IV77 575 aa11.37□□□□□ -0.59
CLN5-213ENST00000636681 GLYCTKQ8IVS8 523 aa11.37□□□□□ -0.59
CLN5-213ENST00000636681 KLHL23Q8NBE8 558 aa11.37□□□□□ -0.59
CLN5-213ENST00000636681 OR10T2Q8NGX3 314 aa11.37□□□□□ -0.59
CLN5-213ENST00000636681 LNX1Q8TBB1 728 aaPredicted RBP11.37□□□□□ -0.59
CLN5-213ENST00000636681 PHOSPHO2Q8TCD6 241 aa11.37□□□□□ -0.59
CLN5-213ENST00000636681 EPS8L1Q8TE68 723 aa11.37□□□□□ -0.59
CLN5-213ENST00000636681 ATRIPQ8WXE1 791 aa11.37□□□□□ -0.59
CLN5-213ENST00000636681 PCDHB18PQ96TA0 734 aa11.37□□□□□ -0.59
CLN5-213ENST00000636681 COLEC11Q9BWP8 271 aa11.37□□□□□ -0.59
CLN5-213ENST00000636681 PBX4Q9BYU1 374 aa11.37□□□□□ -0.59
CLN5-213ENST00000636681 RHOBTB2Q9BYZ6 727 aa11.37□□□□□ -0.59
CLN5-213ENST00000636681 EDEM3Q9BZQ6 932 aa11.37□□□□□ -0.59
CLN5-213ENST00000636681 ALG13Q9NP73 1137 aaKnown RBP11.37□□□□□ -0.59
CLN5-213ENST00000636681 CRTAC1Q9NQ79 661 aa11.37□□□□□ -0.59
CLN5-213ENST00000636681 FAM49BQ9NUQ9 324 aa11.37□□□□□ -0.59
CLN5-213ENST00000636681 TMLHEQ9NVH6 421 aa11.37□□□□□ -0.59
CLN5-213ENST00000636681 DDX43Q9NXZ2 648 aaKnown RBP11.37□□□□□ -0.59
CLN5-213ENST00000636681 AIPL1Q9NZN9 384 aa11.37□□□□□ -0.59
CLN5-213ENST00000636681 NOCTQ9UK39 431 aaKnown RBP11.37□□□□□ -0.59
CLN5-213ENST00000636681 TFR2Q9UP52 801 aa11.37□□□□□ -0.59
CLN5-213ENST00000636681 CNTN6Q9UQ52 1028 aa11.37□□□□□ -0.59
CLN5-213ENST00000636681 DOCK6Q96HP0 2047 aa11.37□□□□□ -0.59
CLN5-213ENST00000636681 C5orf42Q9H799 3197 aa11.37□□□□□ -0.59
CLN5-213ENST00000636681 A8MXQ7 604 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 CLDN5O00501 218 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 GABRDO14764 452 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 ADAM12O43184 909 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 TPM1P09493 284 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 CCDC130P13994 396 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 WARSP23381 471 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms