RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 ITGB1P05556 798 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 POLR2MP0CAP2 368 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 GAAP10253 952 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 USP11P51784 963 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 HADHBP55084 474 aaKnown RBP5.21□□□□□ -1.58
SDCBP-213ENST00000630925 KCNJ10P78508 379 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 YWHAHQ04917 246 aaPredicted RBP5.21□□□□□ -1.58
SDCBP-213ENST00000630925 EPS8Q12929 822 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 PUM1Q14671 1186 aaKnown RBP eCLIP5.21□□□□□ -1.58
SDCBP-213ENST00000630925 LBRQ14739 615 aaKnown RBP5.21□□□□□ -1.58
SDCBP-213ENST00000630925 ZNF827Q17R98 1081 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 ZNF792Q3KQV3 632 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 UAP1L1Q3KQV9 507 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 XKR9Q5GH70 373 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 TOR1AIP1Q5JTV8 583 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 STXBP5Q5T5C0 1151 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 OLFML2BQ68BL8 750 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 TRIM59Q8IWR1 403 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 DPP10Q8N608 796 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 FAM160A2Q8N612 972 aaPredicted RBP5.21□□□□□ -1.58
SDCBP-213ENST00000630925 NBPF15Q8N660 670 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 FAM184AQ8NB25 1140 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 SPATA20Q8TB22 786 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 TRIM43Q96BQ3 446 aaPredicted RBP5.21□□□□□ -1.58
SDCBP-213ENST00000630925 CALML4Q96GE6 196 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 PDLIM5Q96HC4 596 aaKnown RBP5.21□□□□□ -1.58
SDCBP-213ENST00000630925 ACAP3Q96P50 834 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 HEPHQ9BQS7 1158 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 GPR63Q9BZJ6 419 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 AP5M1Q9H0R1 490 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 MS4A5Q9H3V2 200 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 PNPLA8Q9NP80 782 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 GJB4Q9NTQ9 266 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 KANSL3Q9P2N6 904 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 ZNF215Q9UL58 517 aaPredicted RBP5.21□□□□□ -1.58
SDCBP-213ENST00000630925 TTC41PQ6P2S7 1318 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 DEPDC5O75140 1603 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 IQGAP1P46940 1657 aa5.21□□□□□ -1.58
SDCBP-213ENST00000630925 FAM234BA2RU67 622 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 CCDC151A5D8V7 595 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 H0YHG0 523 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 H3BNC9 293 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 TAF4O00268 1085 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 CA12O43570 354 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 SLC25A17O43808 307 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 BCAS2O75934 225 aaPredicted RBP5.2□□□□□ -1.58
SDCBP-213ENST00000630925 TUBB4AP04350 444 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 CSF2RAP15509 400 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 CDH3P22223 829 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 TGM1P22735 817 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 ADSSP30520 456 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 MTNR1BP49286 362 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 HDGFP51858 240 aaKnown RBP5.2□□□□□ -1.58
SDCBP-213ENST00000630925 KIF23Q02241 960 aaPredicted RBP5.2□□□□□ -1.58
SDCBP-213ENST00000630925 PRKCZQ05513 592 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 C19orf57Q0VDD7 668 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 BNIP1Q12981 228 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 SF1Q15637 639 aaKnown RBP5.2□□□□□ -1.58
SDCBP-213ENST00000630925 MAPKAPK3Q16644 382 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 ADCK5Q3MIX3 580 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 XP32Q5T750 250 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 ATPAF1Q5TC12 328 aaPredicted RBP5.2□□□□□ -1.58
SDCBP-213ENST00000630925 IER5Q5VY09 327 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 DENND5AQ6IQ26 1287 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 DRICH1Q6PGQ1 229 aaPredicted RBP5.2□□□□□ -1.58
SDCBP-213ENST00000630925 TRAT1Q6PIZ9 186 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 RABEPKQ7Z6M1 372 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 PXKQ7Z7A4 578 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 GPR149Q86SP6 731 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 TTC7BQ86TV6 843 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 KDF1Q8NAX2 398 aaPredicted RBP5.2□□□□□ -1.58
SDCBP-213ENST00000630925 TMEM145Q8NBT3 493 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 ZNF784Q8NCA9 323 aaPredicted RBP5.2□□□□□ -1.58
SDCBP-213ENST00000630925 FIBINQ8TAL6 211 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 KCNG4Q8TDN1 519 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 ACMSDQ8TDX5 336 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 TGFBRAP1Q8WUH2 860 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 TEKT4Q8WW24 435 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 SSH1Q8WYL5 1049 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 ZNF566Q969W8 418 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 ABHD17AQ96GS6 310 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 TUBA1CQ9BQE3 449 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 TBCDQ9BTW9 1192 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 ANKRD2Q9GZV1 360 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 INTS2Q9H0H0 1204 aaKnown RBP5.2□□□□□ -1.58
SDCBP-213ENST00000630925 ISCUQ9H1K1 167 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 HSD3B7Q9H2F3 369 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 RNPEPQ9H4A4 650 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 PRDM9Q9NQV7 894 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 TMPRSS4Q9NRS4 437 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 TMEM39AQ9NV64 488 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 WBP1LQ9NX94 342 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 HSPBP1Q9NZL4 362 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 IL1RAPL1Q9NZN1 696 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 HMG20BQ9P0W2 317 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 MORF4L1Q9UBU8 362 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 CYP8B1Q9UNU6 501 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 CAMK2AQ9UQM7 478 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 FAM169AQ9Y6X4 670 aa5.2□□□□□ -1.58
SDCBP-213ENST00000630925 MAP3K19Q56UN5 1328 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms