RNA–Protein interactions for RNA: ENST00000625980.2

SPTAN1-211, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 1,713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-211ENST00000625980 TXLNBQ8N3L3 684 aa13.73□□□□□ -0.21
SPTAN1-211ENST00000625980 KBTBD7Q8WVZ9 684 aa13.73□□□□□ -0.21
SPTAN1-211ENST00000625980 APBB2Q92870 758 aa13.73□□□□□ -0.21
SPTAN1-211ENST00000625980 TMEM176AQ96HP8 235 aa13.73□□□□□ -0.21
SPTAN1-211ENST00000625980 THAP2Q9H0W7 228 aa13.73□□□□□ -0.21
SPTAN1-211ENST00000625980 PDCL3Q9H2J4 239 aa13.73□□□□□ -0.21
SPTAN1-211ENST00000625980 INTUQ9ULD6 942 aa13.73□□□□□ -0.21
SPTAN1-211ENST00000625980 L1RE1Q9UN81 338 aa13.73□□□□□ -0.21
SPTAN1-211ENST00000625980 KIAA0100Q14667 2235 aaKnown RBP13.73□□□□□ -0.21
SPTAN1-211ENST00000625980 ANKRD62A6NC57 917 aa13.73□□□□□ -0.21
SPTAN1-211ENST00000625980 TRIM43BA6NCK2 446 aa13.73□□□□□ -0.21
SPTAN1-211ENST00000625980 TUBB4AP04350 444 aa13.73□□□□□ -0.21
SPTAN1-211ENST00000625980 PAEPP09466 180 aa13.73□□□□□ -0.21
SPTAN1-211ENST00000625980 TMEM253P0C7T8 217 aa13.73□□□□□ -0.21
SPTAN1-211ENST00000625980 CASQ1P31415 396 aa13.73□□□□□ -0.21
SPTAN1-211ENST00000625980 GATMP50440 423 aa13.73□□□□□ -0.21
SPTAN1-211ENST00000625980 UPP1Q16831 310 aa13.73□□□□□ -0.21
SPTAN1-211ENST00000625980 NAA35Q5VZE5 725 aa13.73□□□□□ -0.21
SPTAN1-211ENST00000625980 GLB1LQ6UWU2 654 aa13.73□□□□□ -0.21
SPTAN1-211ENST00000625980 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.73□□□□□ -0.21
SPTAN1-211ENST00000625980 LIMS2Q7Z4I7 341 aa13.73□□□□□ -0.21
SPTAN1-211ENST00000625980 ZNF280BQ86YH2 543 aa13.73□□□□□ -0.21
SPTAN1-211ENST00000625980 KIF18AQ8NI77 898 aa13.73□□□□□ -0.21
SPTAN1-211ENST00000625980 TRIM43Q96BQ3 446 aaPredicted RBP13.73□□□□□ -0.21
SPTAN1-211ENST00000625980 TMEM161AQ9NX61 479 aa13.73□□□□□ -0.21
SPTAN1-211ENST00000625980 MYO1AQ9UBC5 1043 aa13.73□□□□□ -0.21
SPTAN1-211ENST00000625980 CHORDC1Q9UHD1 332 aaPredicted RBP13.73□□□□□ -0.21
SPTAN1-211ENST00000625980 MKI67P46013 3256 aaKnown RBP13.72□□□□□ -0.21
SPTAN1-211ENST00000625980 TANC1Q9C0D5 1861 aa13.72□□□□□ -0.21
SPTAN1-211ENST00000625980 ATP8B3O60423 1300 aa13.72□□□□□ -0.21
SPTAN1-211ENST00000625980 BTNL10A8MVZ5 291 aa13.72□□□□□ -0.21
SPTAN1-211ENST00000625980 DDHD2O94830 711 aa13.72□□□□□ -0.21
SPTAN1-211ENST00000625980 EN2P19622 333 aaPredicted RBP13.72□□□□□ -0.21
SPTAN1-211ENST00000625980 RPL9P32969 192 aaKnown RBP13.72□□□□□ -0.21
SPTAN1-211ENST00000625980 NAP1L1P55209 391 aaKnown RBP13.72□□□□□ -0.21
SPTAN1-211ENST00000625980 NOMO3P69849 1222 aa13.72□□□□□ -0.21
SPTAN1-211ENST00000625980 TUSC3Q13454 348 aa13.72□□□□□ -0.21
SPTAN1-211ENST00000625980 NOMO2Q5JPE7 1267 aa13.72□□□□□ -0.21
SPTAN1-211ENST00000625980 SMYD5Q6GMV2 418 aa13.72□□□□□ -0.21
SPTAN1-211ENST00000625980 DENND1BQ6P3S1 775 aa13.72□□□□□ -0.21
SPTAN1-211ENST00000625980 CD300LGQ6UXG3 332 aa13.72□□□□□ -0.21
SPTAN1-211ENST00000625980 OSTM1Q86WC4 334 aa13.72□□□□□ -0.21
SPTAN1-211ENST00000625980 OR6B3Q8NGW1 331 aa13.72□□□□□ -0.21
SPTAN1-211ENST00000625980 CTNNBL1Q8WYA6 563 aaPredicted RBP13.72□□□□□ -0.21
SPTAN1-211ENST00000625980 HEXIM2Q96MH2 286 aaKnown RBP13.72□□□□□ -0.21
SPTAN1-211ENST00000625980 LPIN3Q9BQK8 851 aa13.72□□□□□ -0.21
SPTAN1-211ENST00000625980 NT5C1AQ9BXI3 368 aa13.72□□□□□ -0.21
SPTAN1-211ENST00000625980 PCDHB7Q9Y5E2 793 aa13.72□□□□□ -0.21
SPTAN1-211ENST00000625980 NCANO14594 1321 aa13.71□□□□□ -0.21
SPTAN1-211ENST00000625980 F8W810 466 aa13.71□□□□□ -0.21
SPTAN1-211ENST00000625980 CYB561D2O14569 222 aa13.71□□□□□ -0.21
SPTAN1-211ENST00000625980 ATMINO43313 823 aaPredicted RBP13.71□□□□□ -0.21
SPTAN1-211ENST00000625980 HUS1O60921 280 aa13.71□□□□□ -0.21
SPTAN1-211ENST00000625980 TACC1O75410 805 aa13.71□□□□□ -0.21
SPTAN1-211ENST00000625980 PARNO95453 639 aaKnown RBP13.71□□□□□ -0.21
SPTAN1-211ENST00000625980 PDGFRBP09619 1106 aa13.71□□□□□ -0.21
SPTAN1-211ENST00000625980 LMO2P25791 158 aa13.71□□□□□ -0.21
SPTAN1-211ENST00000625980 PAN2Q504Q3 1202 aaKnown RBP13.71□□□□□ -0.21
SPTAN1-211ENST00000625980 C2CD6Q53TS8 623 aa13.71□□□□□ -0.21
SPTAN1-211ENST00000625980 ACOT1Q86TX2 421 aa13.71□□□□□ -0.21
SPTAN1-211ENST00000625980 PDCL2Q8N4E4 241 aa13.71□□□□□ -0.21
SPTAN1-211ENST00000625980 WDTC1Q8N5D0 677 aa13.71□□□□□ -0.21
SPTAN1-211ENST00000625980 RNF10Q8N5U6 811 aaKnown RBP13.71□□□□□ -0.21
SPTAN1-211ENST00000625980 C12orf29Q8N999 325 aa13.71□□□□□ -0.21
SPTAN1-211ENST00000625980 APPL2Q8NEU8 664 aa13.71□□□□□ -0.21
SPTAN1-211ENST00000625980 SENP8Q96LD8 212 aa13.71□□□□□ -0.21
SPTAN1-211ENST00000625980 DPEP3Q9H4B8 488 aa13.71□□□□□ -0.21
SPTAN1-211ENST00000625980 ELAC1Q9H777 363 aaKnown RBP13.71□□□□□ -0.21
SPTAN1-211ENST00000625980 OSGEPQ9NPF4 335 aa13.71□□□□□ -0.21
SPTAN1-211ENST00000625980 PRDM10Q9NQV6 1147 aa13.71□□□□□ -0.21
SPTAN1-211ENST00000625980 PRDM5Q9NQX1 630 aaPredicted RBP13.71□□□□□ -0.21
SPTAN1-211ENST00000625980 PCDHGC3Q9UN70 934 aa13.71□□□□□ -0.21
SPTAN1-211ENST00000625980 I3L4J1 428 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 VDRP11473 427 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 GNL1P36915 607 aaPredicted RBP13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 NOP2P46087 812 aaKnown RBP13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 GPC5P78333 572 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 CENPCQ03188 943 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 TIGD5Q53EQ6 642 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 WSCD1Q658N2 575 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 TRIM72Q6ZMU5 477 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 DPH6Q7L8W6 267 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 PHLDB2Q86SQ0 1253 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 ADGRF2Q8IZF7 708 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 MCOLN2Q8IZK6 566 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 CRIPAKQ8N1N5 446 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 TTC39CQ8N584 583 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 C1orf131Q8NDD1 294 aaKnown RBP13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 SLC35G2Q8TBE7 412 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 HASPINQ8TF76 798 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 ZNF653Q96CK0 615 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 CASD1Q96PB1 797 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 NOX5Q96PH1 765 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 FAM124BQ9H5Z6 455 aaPredicted RBP13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 TBC1D13Q9NVG8 400 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 LRFN2Q9ULH4 789 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 TIMM13Q9Y5L4 95 aaPredicted RBP13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 A0A0A6YYK5 440 aaPredicted RBP13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 GRID2IPA4D2P6 1211 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms