RNA–Protein interactions for RNA: ENST00000625766.2

CCDC163-201, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 2,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-201ENST00000625766 AGO3Q9H9G7 860 aaKnown RBP12.48□□□□□ -0.41
CCDC163-201ENST00000625766 ERVK-5Q9HDB9 667 aa12.48□□□□□ -0.41
CCDC163-201ENST00000625766 FAM105AQ9NUU6 356 aa12.48□□□□□ -0.41
CCDC163-201ENST00000625766 GDAP2Q9NXN4 497 aa12.48□□□□□ -0.41
CCDC163-201ENST00000625766 CALB1P05937 261 aa12.47□□□□□ -0.41
CCDC163-201ENST00000625766 SLC1A1P43005 524 aa12.47□□□□□ -0.41
CCDC163-201ENST00000625766 RAP1GAPP47736 663 aa12.47□□□□□ -0.41
CCDC163-201ENST00000625766 NFX1Q12986 1120 aaKnown RBP12.47□□□□□ -0.41
CCDC163-201ENST00000625766 MAMLD1Q13495 774 aa12.47□□□□□ -0.41
CCDC163-201ENST00000625766 GLE1Q53GS7 698 aaKnown RBP12.47□□□□□ -0.41
CCDC163-201ENST00000625766 WDR93Q6P2C0 686 aa12.47□□□□□ -0.41
CCDC163-201ENST00000625766 UNC93AQ86WB7 457 aa12.47□□□□□ -0.41
CCDC163-201ENST00000625766 HACE1Q8IYU2 909 aa12.47□□□□□ -0.41
CCDC163-201ENST00000625766 TWNKQ96RR1 684 aa12.47□□□□□ -0.41
CCDC163-201ENST00000625766 EPC1Q9H2F5 836 aa12.47□□□□□ -0.41
CCDC163-201ENST00000625766 PARVAQ9NVD7 372 aa12.47□□□□□ -0.41
CCDC163-201ENST00000625766 TUBGCP4Q9UGJ1 667 aa12.47□□□□□ -0.41
CCDC163-201ENST00000625766 CHORDC1Q9UHD1 332 aaPredicted RBP12.47□□□□□ -0.41
CCDC163-201ENST00000625766 LCMT1Q9UIC8 334 aa12.47□□□□□ -0.41
CCDC163-201ENST00000625766 PADI3Q9ULW8 664 aa12.47□□□□□ -0.41
CCDC163-201ENST00000625766 GIT1Q9Y2X7 761 aa12.47□□□□□ -0.41
CCDC163-201ENST00000625766 SCINQ9Y6U3 715 aa12.47□□□□□ -0.41
CCDC163-201ENST00000625766 TCRBV5S1A1TA0A578 114 aa12.47□□□□□ -0.41
CCDC163-201ENST00000625766 MYO1FO00160 1098 aa12.47□□□□□ -0.41
CCDC163-201ENST00000625766 MYCNP04198 464 aaPredicted RBP12.47□□□□□ -0.41
CCDC163-201ENST00000625766 COMTP21964 271 aa12.47□□□□□ -0.41
CCDC163-201ENST00000625766 CTNNA2P26232 953 aa12.47□□□□□ -0.41
CCDC163-201ENST00000625766 RBM10P98175 930 aaKnown RBP12.47□□□□□ -0.41
CCDC163-201ENST00000625766 DSC3Q14574 896 aa12.47□□□□□ -0.41
CCDC163-201ENST00000625766 MESDQ14696 234 aa12.47□□□□□ -0.41
CCDC163-201ENST00000625766 BRD3Q15059 726 aa12.47□□□□□ -0.41
CCDC163-201ENST00000625766 STILQ15468 1287 aa12.47□□□□□ -0.41
CCDC163-201ENST00000625766 CLUL1Q15846 466 aa12.47□□□□□ -0.41
CCDC163-201ENST00000625766 FBXO38Q6PIJ6 1188 aa12.47□□□□□ -0.41
CCDC163-201ENST00000625766 DPH6Q7L8W6 267 aa12.47□□□□□ -0.41
CCDC163-201ENST00000625766 PASD1Q8IV76 773 aa12.47□□□□□ -0.41
CCDC163-201ENST00000625766 PDCL2Q8N4E4 241 aa12.47□□□□□ -0.41
CCDC163-201ENST00000625766 HNRNPLLQ8WVV9 542 aaKnown RBP12.47□□□□□ -0.41
CCDC163-201ENST00000625766 PPP1R10Q96QC0 940 aaKnown RBP12.47□□□□□ -0.41
CCDC163-201ENST00000625766 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.47□□□□□ -0.41
CCDC163-201ENST00000625766 APOL6Q9BWW8 343 aa12.47□□□□□ -0.41
CCDC163-201ENST00000625766 NT5C1AQ9BXI3 368 aa12.47□□□□□ -0.41
CCDC163-201ENST00000625766 TRMT13Q9NUP7 481 aaKnown RBP12.47□□□□□ -0.41
CCDC163-201ENST00000625766 ARGLU1Q9NWB6 273 aaPredicted RBP12.47□□□□□ -0.41
CCDC163-201ENST00000625766 KLK14Q9P0G3 267 aa12.47□□□□□ -0.41
CCDC163-201ENST00000625766 CEP83Q9Y592 693 aa12.47□□□□□ -0.41
CCDC163-201ENST00000625766 PCDHA3Q9Y5H8 950 aa12.47□□□□□ -0.41
CCDC163-201ENST00000625766 CCDC66A2RUB6 948 aa12.46□□□□□ -0.41
CCDC163-201ENST00000625766 PPEF2O14830 753 aa12.46□□□□□ -0.41
CCDC163-201ENST00000625766 ATMINO43313 823 aaPredicted RBP12.46□□□□□ -0.41
CCDC163-201ENST00000625766 CEP104O60308 925 aa12.46□□□□□ -0.41
CCDC163-201ENST00000625766 CTSHP09668 335 aa12.46□□□□□ -0.41
CCDC163-201ENST00000625766 ITGA4P13612 1032 aa12.46□□□□□ -0.41
CCDC163-201ENST00000625766 NDST1P52848 882 aa12.46□□□□□ -0.41
CCDC163-201ENST00000625766 LPIN1Q14693 890 aa12.46□□□□□ -0.41
CCDC163-201ENST00000625766 GLRA4Q5JXX5 417 aa12.46□□□□□ -0.41
CCDC163-201ENST00000625766 MMS22LQ6ZRQ5 1243 aa12.46□□□□□ -0.41
CCDC163-201ENST00000625766 ERICH1Q86X53 443 aa12.46□□□□□ -0.41
CCDC163-201ENST00000625766 UBL4BQ8N7F7 174 aa12.46□□□□□ -0.41
CCDC163-201ENST00000625766 GSTCDQ8NEC7 633 aa12.46□□□□□ -0.41
CCDC163-201ENST00000625766 C11orf70Q9BRQ4 267 aa12.46□□□□□ -0.41
CCDC163-201ENST00000625766 PHF24Q9UPV7 400 aa12.46□□□□□ -0.41
CCDC163-201ENST00000625766 SNX9Q9Y5X1 595 aa12.46□□□□□ -0.41
CCDC163-201ENST00000625766 CENPFP49454 3210 aa12.46□□□□□ -0.41
CCDC163-201ENST00000625766 A0A0U1RQF3 1178 aa12.46□□□□□ -0.42
CCDC163-201ENST00000625766 CCDC151A5D8V7 595 aa12.46□□□□□ -0.42
CCDC163-201ENST00000625766 KPNA7A9QM74 516 aa12.46□□□□□ -0.42
CCDC163-201ENST00000625766 PTGESO14684 152 aa12.46□□□□□ -0.42
CCDC163-201ENST00000625766 CD19P15391 556 aa12.46□□□□□ -0.42
CCDC163-201ENST00000625766 RAB27AP51159 221 aa12.46□□□□□ -0.42
CCDC163-201ENST00000625766 GSCP56915 257 aaPredicted RBP12.46□□□□□ -0.42
CCDC163-201ENST00000625766 SOWAHAQ2M3V2 549 aa12.46□□□□□ -0.42
CCDC163-201ENST00000625766 DENND1BQ6P3S1 775 aa12.46□□□□□ -0.42
CCDC163-201ENST00000625766 LCLAT1Q6UWP7 414 aa12.46□□□□□ -0.42
CCDC163-201ENST00000625766 FAM43BQ6ZT52 329 aaPredicted RBP12.46□□□□□ -0.42
CCDC163-201ENST00000625766 CRYBG2Q8N1P7 616 aa12.46□□□□□ -0.42
CCDC163-201ENST00000625766 FEZF2Q8TBJ5 459 aa12.46□□□□□ -0.42
CCDC163-201ENST00000625766 RUBCNQ92622 972 aa12.46□□□□□ -0.42
CCDC163-201ENST00000625766 HEXIM2Q96MH2 286 aaKnown RBP12.46□□□□□ -0.42
CCDC163-201ENST00000625766 ZNF560Q96MR9 790 aa12.46□□□□□ -0.42
CCDC163-201ENST00000625766 SLC38A7Q9NVC3 462 aa12.46□□□□□ -0.42
CCDC163-201ENST00000625766 STRIP2Q9ULQ0 834 aa12.46□□□□□ -0.42
CCDC163-201ENST00000625766 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.46□□□□□ -0.42
CCDC163-201ENST00000625766 NOD1Q9Y239 953 aa12.46□□□□□ -0.42
CCDC163-201ENST00000625766 TRIP11Q15643 1979 aa12.45□□□□□ -0.42
CCDC163-201ENST00000625766 TMEM191CA6NGB0 347 aa12.45□□□□□ -0.42
CCDC163-201ENST00000625766 PGRMC1O00264 195 aaKnown RBP12.45□□□□□ -0.42
CCDC163-201ENST00000625766 O00370 1275 aa12.45□□□□□ -0.42
CCDC163-201ENST00000625766 PROSCO94903 275 aa12.45□□□□□ -0.42
CCDC163-201ENST00000625766 RHOXF2BP0C7M4 288 aa12.45□□□□□ -0.42
CCDC163-201ENST00000625766 MCM3P25205 808 aa12.45□□□□□ -0.42
CCDC163-201ENST00000625766 CD52P31358 61 aa12.45□□□□□ -0.42
CCDC163-201ENST00000625766 CTNNA1P35221 906 aaKnown RBP12.45□□□□□ -0.42
CCDC163-201ENST00000625766 GPD2P43304 727 aa12.45□□□□□ -0.42
CCDC163-201ENST00000625766 GABRB2P47870 512 aa12.45□□□□□ -0.42
CCDC163-201ENST00000625766 TAF6P49848 677 aa12.45□□□□□ -0.42
CCDC163-201ENST00000625766 HTRA3P83110 453 aa12.45□□□□□ -0.42
CCDC163-201ENST00000625766 TAP1Q03518 808 aa12.45□□□□□ -0.42
CCDC163-201ENST00000625766 SOX4Q06945 474 aaPredicted RBP12.45□□□□□ -0.42
CCDC163-201ENST00000625766 SGO2Q562F6 1265 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms