RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 ATP6V1G2O95670 118 aa18.71■□□□□ 0.59
PCF11-207ENST00000624931 SHBGP04278 402 aa18.71■□□□□ 0.59
PCF11-207ENST00000624931 GZMAP12544 262 aa18.71■□□□□ 0.59
PCF11-207ENST00000624931 DLG4P78352 724 aa18.71■□□□□ 0.59
PCF11-207ENST00000624931 CXCL17Q6UXB2 119 aa18.71■□□□□ 0.59
PCF11-207ENST00000624931 SYDE1Q6ZW31 735 aaPredicted RBP18.71■□□□□ 0.59
PCF11-207ENST00000624931 C12orf50Q8NA57 414 aaPredicted RBP18.71■□□□□ 0.59
PCF11-207ENST00000624931 SLCO2A1Q92959 643 aa18.71■□□□□ 0.59
PCF11-207ENST00000624931 ART4Q93070 314 aa18.71■□□□□ 0.59
PCF11-207ENST00000624931 TMEM134Q9H6X4 195 aa18.71■□□□□ 0.59
PCF11-207ENST00000624931 XPNPEP3Q9NQH7 507 aa18.71■□□□□ 0.59
PCF11-207ENST00000624931 SAGE1Q9NXZ1 904 aa18.71■□□□□ 0.59
PCF11-207ENST00000624931 CTTNBP2NLQ9P2B4 639 aa18.71■□□□□ 0.59
PCF11-207ENST00000624931 ANKFY1Q9P2R3 1169 aa18.71■□□□□ 0.59
PCF11-207ENST00000624931 TRIP12Q14669 1992 aaPredicted RBP18.7■□□□□ 0.58
PCF11-207ENST00000624931 A0A087WZ62 844 aa18.7■□□□□ 0.58
PCF11-207ENST00000624931 PMM2O15305 246 aa18.7■□□□□ 0.58
PCF11-207ENST00000624931 B4GALT5O43286 388 aa18.7■□□□□ 0.58
PCF11-207ENST00000624931 ADAMTS4O75173 837 aa18.7■□□□□ 0.58
PCF11-207ENST00000624931 PRKCBP05771 671 aa18.7■□□□□ 0.58
PCF11-207ENST00000624931 TMEM62Q0P6H9 643 aa18.7■□□□□ 0.58
PCF11-207ENST00000624931 CRYMQ14894 314 aa18.7■□□□□ 0.58
PCF11-207ENST00000624931 MAP3K21Q5TCX8 1036 aa18.7■□□□□ 0.58
PCF11-207ENST00000624931 CEP57Q86XR8 500 aa18.7■□□□□ 0.58
PCF11-207ENST00000624931 DNAAF5Q86Y56 855 aa18.7■□□□□ 0.58
PCF11-207ENST00000624931 ZBTB8OSQ8IWT0 167 aa18.7■□□□□ 0.58
PCF11-207ENST00000624931 LRRC34Q8IZ02 419 aa18.7■□□□□ 0.58
PCF11-207ENST00000624931 PRELID2Q8N945 189 aa18.7■□□□□ 0.58
PCF11-207ENST00000624931 MAIP1Q8WWC4 291 aa18.7■□□□□ 0.58
PCF11-207ENST00000624931 ARHGEF26Q96DR7 871 aa18.7■□□□□ 0.58
PCF11-207ENST00000624931 SCLT1Q96NL6 688 aa18.7■□□□□ 0.58
PCF11-207ENST00000624931 SERPINB12Q96P63 405 aa18.7■□□□□ 0.58
PCF11-207ENST00000624931 FDXACB1Q9BRP7 624 aaPredicted RBP18.7■□□□□ 0.58
PCF11-207ENST00000624931 ERVK-5Q9HDB9 667 aa18.7■□□□□ 0.58
PCF11-207ENST00000624931 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.7■□□□□ 0.584e-18■□□□□ 11.2
PCF11-207ENST00000624931 TLDC2A0PJX2 215 aa18.69■□□□□ 0.58
PCF11-207ENST00000624931 INO80B-WBP1J3KQ70 363 aa18.69■□□□□ 0.58
PCF11-207ENST00000624931 O00370 1275 aa18.69■□□□□ 0.58
PCF11-207ENST00000624931 RIPK2O43353 540 aa18.69■□□□□ 0.58
PCF11-207ENST00000624931 MSCO60682 206 aa18.69■□□□□ 0.58
PCF11-207ENST00000624931 PIGRP01833 764 aa18.69■□□□□ 0.58
PCF11-207ENST00000624931 IQCF3P0C7M6 154 aa18.69■□□□□ 0.58
PCF11-207ENST00000624931 HARSP12081 509 aaKnown RBP18.69■□□□□ 0.58
PCF11-207ENST00000624931 MAN1A1P33908 653 aa18.69■□□□□ 0.58
PCF11-207ENST00000624931 SNRPFP62306 86 aaKnown RBP18.69■□□□□ 0.58
PCF11-207ENST00000624931 MBTD1Q05BQ5 628 aa18.69■□□□□ 0.58
PCF11-207ENST00000624931 BFSP1Q12934 665 aa18.69■□□□□ 0.58
PCF11-207ENST00000624931 TFDP1Q14186 410 aa18.69■□□□□ 0.58
PCF11-207ENST00000624931 PPP1R7Q15435 360 aa18.69■□□□□ 0.58
PCF11-207ENST00000624931 ZBTB41Q5SVQ8 909 aa18.69■□□□□ 0.58
PCF11-207ENST00000624931 CCDC137Q6PK04 289 aaKnown RBP18.69■□□□□ 0.58
PCF11-207ENST00000624931 INTS8Q75QN2 995 aaKnown RBP18.69■□□□□ 0.58
PCF11-207ENST00000624931 FAM228AQ86W67 206 aa18.69■□□□□ 0.58
PCF11-207ENST00000624931 KIAA0319LQ8IZA0 1049 aa18.69■□□□□ 0.58
PCF11-207ENST00000624931 ALG3Q92685 438 aa18.69■□□□□ 0.58
PCF11-207ENST00000624931 KCNN1Q92952 543 aa18.69■□□□□ 0.58
PCF11-207ENST00000624931 FAM84AQ96KN4 292 aa18.69■□□□□ 0.58
PCF11-207ENST00000624931 INO80BQ9C086 356 aaPredicted RBP18.69■□□□□ 0.58
PCF11-207ENST00000624931 NOD2Q9HC29 1040 aa18.69■□□□□ 0.58
PCF11-207ENST00000624931 WHRNQ9P202 907 aa18.69■□□□□ 0.58
PCF11-207ENST00000624931 PTCH2Q9Y6C5 1203 aa18.69■□□□□ 0.58
PCF11-207ENST00000624931 HTTP42858 3142 aa18.69■□□□□ 0.58
PCF11-207ENST00000624931 RRN3P2A6NIE6 340 aa18.69■□□□□ 0.58
PCF11-207ENST00000624931 MAPK13O15264 365 aa18.69■□□□□ 0.58
PCF11-207ENST00000624931 INHAP05111 366 aa18.69■□□□□ 0.58
PCF11-207ENST00000624931 VIMP08670 466 aaKnown RBP18.69■□□□□ 0.58
PCF11-207ENST00000624931 COILP38432 576 aaPredicted RBP18.69■□□□□ 0.58
PCF11-207ENST00000624931 RPL21P46778 160 aaKnown RBP18.69■□□□□ 0.58
PCF11-207ENST00000624931 CAV1Q03135 178 aa18.69■□□□□ 0.58
PCF11-207ENST00000624931 CALCOCO2Q13137 446 aa18.69■□□□□ 0.58
PCF11-207ENST00000624931 CNGA2Q16280 664 aa18.69■□□□□ 0.58
PCF11-207ENST00000624931 SPRED3Q2MJR0 410 aa18.69■□□□□ 0.58
PCF11-207ENST00000624931 C1orf220Q5T0J3 134 aa18.69■□□□□ 0.58
PCF11-207ENST00000624931 HIBCHQ6NVY1 386 aaPredicted RBP18.69■□□□□ 0.58
PCF11-207ENST00000624931 FAM213AQ9BRX8 229 aa18.69■□□□□ 0.58
PCF11-207ENST00000624931 IFT122Q9HBG6 1241 aa18.69■□□□□ 0.58
PCF11-207ENST00000624931 SEPT11Q9NVA2 429 aaKnown RBP18.69■□□□□ 0.58
PCF11-207ENST00000624931 KCNG1Q9UIX4 513 aa18.69■□□□□ 0.58
PCF11-207ENST00000624931 COG5Q9UP83 839 aa18.69■□□□□ 0.58
PCF11-207ENST00000624931 PCDHA3Q9Y5H8 950 aa18.69■□□□□ 0.58
PCF11-207ENST00000624931 TREHO43280 583 aa18.68■□□□□ 0.58
PCF11-207ENST00000624931 SUN1O94901 812 aa18.68■□□□□ 0.58
PCF11-207ENST00000624931 FTLP02792 175 aaPredicted RBP18.68■□□□□ 0.58
PCF11-207ENST00000624931 PEX5P50542 639 aa18.68■□□□□ 0.58
PCF11-207ENST00000624931 EFNA5P52803 228 aa18.68■□□□□ 0.58
PCF11-207ENST00000624931 SLC8A3P57103 927 aa18.68■□□□□ 0.58
PCF11-207ENST00000624931 ZNF268Q14587 947 aaPredicted RBP18.68■□□□□ 0.58
PCF11-207ENST00000624931 SNRNP35Q16560 246 aaKnown RBP18.68■□□□□ 0.58
PCF11-207ENST00000624931 SEZ6Q53EL9 994 aa18.68■□□□□ 0.58
PCF11-207ENST00000624931 ZBTB33Q86T24 672 aa18.68■□□□□ 0.58
PCF11-207ENST00000624931 CDR2LQ86X02 465 aaPredicted RBP18.68■□□□□ 0.58
PCF11-207ENST00000624931 RSRC1Q96IZ7 334 aaKnown RBP18.68■□□□□ 0.58
PCF11-207ENST00000624931 MTG1Q9BT17 334 aaPredicted RBP18.68■□□□□ 0.58
PCF11-207ENST00000624931 C2orf40Q9H1Z8 148 aa18.68■□□□□ 0.58
PCF11-207ENST00000624931 BATF3Q9NR55 127 aa18.68■□□□□ 0.58
PCF11-207ENST00000624931 USP15Q9Y4E8 981 aaPredicted RBP18.68■□□□□ 0.58
PCF11-207ENST00000624931 TRIM17Q9Y577 477 aa18.68■□□□□ 0.58
PCF11-207ENST00000624931 NRCAMQ92823 1304 aa18.68■□□□□ 0.58
PCF11-207ENST00000624931 SCN10AQ9Y5Y9 1956 aa18.68■□□□□ 0.58
PCF11-207ENST00000624931 MBLAC1A4D2B0 266 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms