RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 SYN3O14994 580 aa21.23■□□□□ 0.99
PDLIM2-221ENST00000622702 HUS1O60921 280 aa21.23■□□□□ 0.99
PDLIM2-221ENST00000622702 CYP11A1P05108 521 aa21.23■□□□□ 0.99
PDLIM2-221ENST00000622702 SOWAHAQ2M3V2 549 aa21.23■□□□□ 0.99
PDLIM2-221ENST00000622702 SMYD5Q6GMV2 418 aa21.23■□□□□ 0.99
PDLIM2-221ENST00000622702 GJB7Q6PEY0 223 aa21.23■□□□□ 0.99
PDLIM2-221ENST00000622702 RRAGAQ7L523 313 aa21.23■□□□□ 0.99
PDLIM2-221ENST00000622702 APPL2Q8NEU8 664 aa21.23■□□□□ 0.99
PDLIM2-221ENST00000622702 SPATA18Q8TC71 538 aa21.23■□□□□ 0.99
PDLIM2-221ENST00000622702 IQCDQ96DY2 449 aa21.23■□□□□ 0.99
PDLIM2-221ENST00000622702 KREMEN1Q96MU8 473 aa21.23■□□□□ 0.99
PDLIM2-221ENST00000622702 MMS19Q96T76 1030 aa21.23■□□□□ 0.99
PDLIM2-221ENST00000622702 TCF25Q9BQ70 676 aa21.23■□□□□ 0.99
PDLIM2-221ENST00000622702 NAA15Q9BXJ9 866 aaKnown RBP21.23■□□□□ 0.99
PDLIM2-221ENST00000622702 TTYH3Q9C0H2 523 aa21.23■□□□□ 0.99
PDLIM2-221ENST00000622702 STK39Q9UEW8 545 aa21.23■□□□□ 0.99
PDLIM2-221ENST00000622702 L1RE1Q9UN81 338 aa21.23■□□□□ 0.99
PDLIM2-221ENST00000622702 PCDHGC5Q9Y5F6 944 aa21.23■□□□□ 0.99
PDLIM2-221ENST00000622702 XIRP2A4UGR9 3374 aa21.22■□□□□ 0.99
PDLIM2-221ENST00000622702 TACC1O75410 805 aa21.22■□□□□ 0.99
PDLIM2-221ENST00000622702 ODC1P11926 461 aa21.22■□□□□ 0.99
PDLIM2-221ENST00000622702 TRIM21P19474 475 aaKnown RBP21.22■□□□□ 0.99
PDLIM2-221ENST00000622702 TYMPP19971 482 aa21.22■□□□□ 0.99
PDLIM2-221ENST00000622702 CDC25BP30305 580 aa21.22■□□□□ 0.99
PDLIM2-221ENST00000622702 IQCEQ6IPM2 695 aa21.22■□□□□ 0.99
PDLIM2-221ENST00000622702 TMC7Q7Z402 723 aa21.22■□□□□ 0.99
PDLIM2-221ENST00000622702 DDX53Q86TM3 631 aaKnown RBP21.22■□□□□ 0.99
PDLIM2-221ENST00000622702 VPS52Q8N1B4 723 aa21.22■□□□□ 0.99
PDLIM2-221ENST00000622702 TMEM86AQ8N2M4 240 aa21.22■□□□□ 0.99
PDLIM2-221ENST00000622702 KAT5Q92993 513 aa21.22■□□□□ 0.99
PDLIM2-221ENST00000622702 ARID3AQ99856 593 aa21.22■□□□□ 0.99
PDLIM2-221ENST00000622702 VN1R3Q9BXE9 311 aa21.22■□□□□ 0.99
PDLIM2-221ENST00000622702 EDEM3Q9BZQ6 932 aa21.22■□□□□ 0.99
PDLIM2-221ENST00000622702 SMYD3Q9H7B4 428 aa21.22■□□□□ 0.99
PDLIM2-221ENST00000622702 ENTPD7Q9NQZ7 604 aa21.22■□□□□ 0.99
PDLIM2-221ENST00000622702 CEP72Q9P209 647 aa21.22■□□□□ 0.99
PDLIM2-221ENST00000622702 DNAJC12Q9UKB3 198 aa21.22■□□□□ 0.99
PDLIM2-221ENST00000622702 DSEQ9UL01 958 aa21.22■□□□□ 0.99
PDLIM2-221ENST00000622702 FHOD1Q9Y613 1164 aa21.22■□□□□ 0.99
PDLIM2-221ENST00000622702 FGFR3P22607 806 aa21.21■□□□□ 0.99
PDLIM2-221ENST00000622702 MFAP3P55082 362 aa21.21■□□□□ 0.99
PDLIM2-221ENST00000622702 POLR2FP61218 127 aaKnown RBP21.21■□□□□ 0.99
PDLIM2-221ENST00000622702 SKIV2LQ15477 1246 aaKnown RBP21.21■□□□□ 0.99
PDLIM2-221ENST00000622702 TCEAL5Q5H9L2 206 aa21.21■□□□□ 0.99
PDLIM2-221ENST00000622702 PLPP4Q5VZY2 271 aa21.21■□□□□ 0.99
PDLIM2-221ENST00000622702 SCARA5Q6ZMJ2 495 aa21.21■□□□□ 0.99
PDLIM2-221ENST00000622702 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.21■□□□□ 0.99
PDLIM2-221ENST00000622702 PDCL2Q8N4E4 241 aa21.21■□□□□ 0.99
PDLIM2-221ENST00000622702 TTC39CQ8N584 583 aa21.21■□□□□ 0.99
PDLIM2-221ENST00000622702 SDCBP2Q9H190 292 aa21.21■□□□□ 0.99
PDLIM2-221ENST00000622702 AJAP1Q9UKB5 411 aaPredicted RBP21.21■□□□□ 0.99
PDLIM2-221ENST00000622702 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.21■□□□□ 0.99
PDLIM2-221ENST00000622702 FSCN2O14926 492 aa21.2■□□□□ 0.98
PDLIM2-221ENST00000622702 WEE2P0C1S8 567 aa21.2■□□□□ 0.98
PDLIM2-221ENST00000622702 INCA1Q0VD86 236 aa21.2■□□□□ 0.98
PDLIM2-221ENST00000622702 FAM171A1Q5VUB5 890 aa21.2■□□□□ 0.98
PDLIM2-221ENST00000622702 WSCD1Q658N2 575 aa21.2■□□□□ 0.98
PDLIM2-221ENST00000622702 PDE12Q6L8Q7 609 aaKnown RBP21.2■□□□□ 0.98
PDLIM2-221ENST00000622702 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.2■□□□□ 0.98
PDLIM2-221ENST00000622702 UBR7Q8N806 425 aa21.2■□□□□ 0.98
PDLIM2-221ENST00000622702 KBTBD7Q8WVZ9 684 aa21.2■□□□□ 0.98
PDLIM2-221ENST00000622702 STK33Q9BYT3 514 aa21.2■□□□□ 0.98
PDLIM2-221ENST00000622702 A0A1W2PQJ5 194 aa21.2■□□□□ 0.98
PDLIM2-221ENST00000622702 GABRDO14764 452 aa21.2■□□□□ 0.98
PDLIM2-221ENST00000622702 SOD2P04179 222 aa21.2■□□□□ 0.98
PDLIM2-221ENST00000622702 WARSP23381 471 aaKnown RBP21.2■□□□□ 0.98
PDLIM2-221ENST00000622702 TKTP29401 623 aaKnown RBP21.2■□□□□ 0.98
PDLIM2-221ENST00000622702 RAP1GAPP47736 663 aa21.2■□□□□ 0.98
PDLIM2-221ENST00000622702 CDH8P55286 799 aa21.2■□□□□ 0.98
PDLIM2-221ENST00000622702 YWHAEP62258 255 aaKnown RBP21.2■□□□□ 0.98
PDLIM2-221ENST00000622702 TRIM14Q14142 442 aa21.2■□□□□ 0.98
PDLIM2-221ENST00000622702 ADGRF2Q8IZF7 708 aa21.2■□□□□ 0.98
PDLIM2-221ENST00000622702 SHC3Q92529 594 aa21.2■□□□□ 0.98
PDLIM2-221ENST00000622702 MRPL45Q9BRJ2 306 aaKnown RBP21.2■□□□□ 0.98
PDLIM2-221ENST00000622702 HERC2P3Q9BVR0 1158 aa21.2■□□□□ 0.98
PDLIM2-221ENST00000622702 NGRNQ9NPE2 291 aaKnown RBP21.2■□□□□ 0.98
PDLIM2-221ENST00000622702 CHST7Q9NS84 486 aa21.2■□□□□ 0.98
PDLIM2-221ENST00000622702 CISHQ9NSE2 258 aa21.2■□□□□ 0.98
PDLIM2-221ENST00000622702 OAZ2O95190 189 aa21.19■□□□□ 0.98
PDLIM2-221ENST00000622702 GYPCP04921 128 aa21.19■□□□□ 0.98
PDLIM2-221ENST00000622702 ACO1P21399 889 aaKnown RBP21.19■□□□□ 0.98
PDLIM2-221ENST00000622702 CA8P35219 290 aa21.19■□□□□ 0.98
PDLIM2-221ENST00000622702 SMC1AQ14683 1233 aaKnown RBP21.19■□□□□ 0.98
PDLIM2-221ENST00000622702 USP41Q3LFD5 358 aa21.19■□□□□ 0.98
PDLIM2-221ENST00000622702 TMC6Q7Z403 805 aa21.19■□□□□ 0.98
PDLIM2-221ENST00000622702 ADGRD2Q7Z7M1 963 aa21.19■□□□□ 0.98
PDLIM2-221ENST00000622702 METTL23Q86XA0 190 aa21.19■□□□□ 0.98
PDLIM2-221ENST00000622702 GPR65Q8IYL9 337 aa21.19■□□□□ 0.98
PDLIM2-221ENST00000622702 PPP2R3CQ969Q6 453 aa21.19■□□□□ 0.98
PDLIM2-221ENST00000622702 TTPALQ9BTX7 342 aa21.19■□□□□ 0.98
PDLIM2-221ENST00000622702 ZBP1Q9H171 429 aa21.19■□□□□ 0.98
PDLIM2-221ENST00000622702 NLRC4Q9NPP4 1024 aa21.19■□□□□ 0.98
PDLIM2-221ENST00000622702 BARX2Q9UMQ3 279 aaPredicted RBP21.19■□□□□ 0.98
PDLIM2-221ENST00000622702 TIMM13Q9Y5L4 95 aaPredicted RBP21.19■□□□□ 0.98
PDLIM2-221ENST00000622702 UNC80Q8N2C7 3258 aa21.18■□□□□ 0.98
PDLIM2-221ENST00000622702 VWA8A3KMH1 1905 aa21.18■□□□□ 0.98
PDLIM2-221ENST00000622702 TSC2P49815 1807 aa21.18■□□□□ 0.98
PDLIM2-221ENST00000622702 SPTBN5Q9NRC6 3674 aaKnown RBP21.18■□□□□ 0.98
PDLIM2-221ENST00000622702 HIDE1A8MVS5 230 aa21.18■□□□□ 0.98
PDLIM2-221ENST00000622702 CILPO75339 1184 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms