RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 MAPK8IP2Q13387 824 aaPredicted RBP19.01■□□□□ 0.63
PTCHD3-202ENST00000622555 SPOUT1Q5T280 376 aaKnown RBP19.01■□□□□ 0.63
PTCHD3-202ENST00000622555 WSCD1Q658N2 575 aa19.01■□□□□ 0.63
PTCHD3-202ENST00000622555 SMYD5Q6GMV2 418 aa19.01■□□□□ 0.63
PTCHD3-202ENST00000622555 RAD9BQ6WBX8 426 aa19.01■□□□□ 0.63
PTCHD3-202ENST00000622555 ZNF571Q7Z3V5 609 aaPredicted RBP19.01■□□□□ 0.63
PTCHD3-202ENST00000622555 LIMS2Q7Z4I7 341 aa19.01■□□□□ 0.63
PTCHD3-202ENST00000622555 OR6B3Q8NGW1 331 aa19.01■□□□□ 0.63
PTCHD3-202ENST00000622555 EPS8L1Q8TE68 723 aa19.01■□□□□ 0.63
PTCHD3-202ENST00000622555 KBTBD7Q8WVZ9 684 aa19.01■□□□□ 0.63
PTCHD3-202ENST00000622555 SLC9A7Q96T83 725 aa19.01■□□□□ 0.63
PTCHD3-202ENST00000622555 SNX25Q9H3E2 840 aa19.01■□□□□ 0.63
PTCHD3-202ENST00000622555 CWH43Q9H720 699 aa19.01■□□□□ 0.63
PTCHD3-202ENST00000622555 TADA2AO75478 443 aa19■□□□□ 0.63
PTCHD3-202ENST00000622555 CYLC1P35663 651 aaPredicted RBP19■□□□□ 0.63
PTCHD3-202ENST00000622555 PBX3P40426 434 aa19■□□□□ 0.63
PTCHD3-202ENST00000622555 BCAR1P56945 870 aa19■□□□□ 0.63
PTCHD3-202ENST00000622555 ORC1Q13415 861 aa19■□□□□ 0.63
PTCHD3-202ENST00000622555 NOP9Q86U38 636 aaKnown RBP19■□□□□ 0.63
PTCHD3-202ENST00000622555 CCDC170Q8IYT3 715 aa19■□□□□ 0.63
PTCHD3-202ENST00000622555 WHAMMQ8TF30 809 aa19■□□□□ 0.63
PTCHD3-202ENST00000622555 SLC20A1Q8WUM9 679 aa19■□□□□ 0.63
PTCHD3-202ENST00000622555 SUSD3Q96L08 255 aa19■□□□□ 0.63
PTCHD3-202ENST00000622555 TWNKQ96RR1 684 aa19■□□□□ 0.63
PTCHD3-202ENST00000622555 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19■□□□□ 0.63
PTCHD3-202ENST00000622555 ELOVL4Q9GZR5 314 aa19■□□□□ 0.63
PTCHD3-202ENST00000622555 PUF60Q9UHX1 559 aaKnown RBP19■□□□□ 0.63
PTCHD3-202ENST00000622555 KIAA1671Q9BY89 1806 aa19■□□□□ 0.63
PTCHD3-202ENST00000622555 NT5C1B-RDH14C9J2C7 533 aa19■□□□□ 0.63
PTCHD3-202ENST00000622555 M0QZQ0 153 aa19■□□□□ 0.63
PTCHD3-202ENST00000622555 AKR1B10O60218 316 aa19■□□□□ 0.63
PTCHD3-202ENST00000622555 ATP2A2P16615 1042 aaKnown RBP19■□□□□ 0.63
PTCHD3-202ENST00000622555 WARSP23381 471 aaKnown RBP19■□□□□ 0.63
PTCHD3-202ENST00000622555 GNA15P30679 374 aa19■□□□□ 0.63
PTCHD3-202ENST00000622555 GNL1P36915 607 aaPredicted RBP19■□□□□ 0.63
PTCHD3-202ENST00000622555 ALDH7A1P49419 539 aaKnown RBP19■□□□□ 0.63
PTCHD3-202ENST00000622555 RAD23BP54727 409 aa19■□□□□ 0.63
PTCHD3-202ENST00000622555 TAF3Q5VWG9 929 aa19■□□□□ 0.63
PTCHD3-202ENST00000622555 VPS36Q86VN1 386 aa19■□□□□ 0.63
PTCHD3-202ENST00000622555 TMEM86AQ8N2M4 240 aa19■□□□□ 0.63
PTCHD3-202ENST00000622555 NT5C1AQ9BXI3 368 aa19■□□□□ 0.63
PTCHD3-202ENST00000622555 NOCTQ9UK39 431 aaKnown RBP19■□□□□ 0.63
PTCHD3-202ENST00000622555 ADAM28Q9UKQ2 775 aa19■□□□□ 0.63
PTCHD3-202ENST00000622555 TIMM13Q9Y5L4 95 aaPredicted RBP19■□□□□ 0.63
PTCHD3-202ENST00000622555 ARHGEF37A1IGU5 675 aa18.99■□□□□ 0.63
PTCHD3-202ENST00000622555 A8MXQ7 604 aa18.99■□□□□ 0.63
PTCHD3-202ENST00000622555 TRAPPC3O43617 180 aa18.99■□□□□ 0.63
PTCHD3-202ENST00000622555 PAEPP09466 180 aa18.99■□□□□ 0.63
PTCHD3-202ENST00000622555 FAM163BP0C2L3 166 aa18.99■□□□□ 0.63
PTCHD3-202ENST00000622555 KIF11P52732 1056 aa18.99■□□□□ 0.63
PTCHD3-202ENST00000622555 UNC93AQ86WB7 457 aa18.99■□□□□ 0.63
PTCHD3-202ENST00000622555 HERC6Q8IVU3 1022 aa18.99■□□□□ 0.63
PTCHD3-202ENST00000622555 SLC4A11Q8NBS3 891 aa18.99■□□□□ 0.63
PTCHD3-202ENST00000622555 PHOSPHO2Q8TCD6 241 aa18.99■□□□□ 0.63
PTCHD3-202ENST00000622555 TMEM176AQ96HP8 235 aa18.99■□□□□ 0.63
PTCHD3-202ENST00000622555 AGPAT1Q99943 283 aa18.99■□□□□ 0.63
PTCHD3-202ENST00000622555 SEPT11Q9NVA2 429 aaKnown RBP18.99■□□□□ 0.63
PTCHD3-202ENST00000622555 MARCH5Q9NX47 278 aa18.99■□□□□ 0.63
PTCHD3-202ENST00000622555 MRPL42Q9Y6G3 142 aaKnown RBP18.99■□□□□ 0.63
PTCHD3-202ENST00000622555 EPN1Q9Y6I3 576 aaPredicted RBP18.99■□□□□ 0.63
PTCHD3-202ENST00000622555 THAP12O43422 761 aa18.98■□□□□ 0.63
PTCHD3-202ENST00000622555 NDUFA10O95299 355 aa18.98■□□□□ 0.63
PTCHD3-202ENST00000622555 CD19P15391 556 aa18.98■□□□□ 0.63
PTCHD3-202ENST00000622555 TNFAIP3P21580 790 aa18.98■□□□□ 0.63
PTCHD3-202ENST00000622555 HTRA4P83105 476 aaPredicted RBP18.98■□□□□ 0.63
PTCHD3-202ENST00000622555 OSTM1Q86WC4 334 aa18.98■□□□□ 0.63
PTCHD3-202ENST00000622555 METTL23Q86XA0 190 aa18.98■□□□□ 0.63
PTCHD3-202ENST00000622555 ADAMTS1Q9UHI8 967 aa18.98■□□□□ 0.63
PTCHD3-202ENST00000622555 DSEQ9UL01 958 aa18.98■□□□□ 0.63
PTCHD3-202ENST00000622555 PCDHB8Q9UN66 801 aa18.98■□□□□ 0.63
PTCHD3-202ENST00000622555 INSL6Q9Y581 213 aa18.98■□□□□ 0.63
PTCHD3-202ENST00000622555 NME7Q9Y5B8 376 aa18.98■□□□□ 0.63
PTCHD3-202ENST00000622555 VWA8A3KMH1 1905 aa18.98■□□□□ 0.63
PTCHD3-202ENST00000622555 HCRTO43612 131 aa18.97■□□□□ 0.63
PTCHD3-202ENST00000622555 PDGFRBP09619 1106 aa18.97■□□□□ 0.63
PTCHD3-202ENST00000622555 LAG3P18627 525 aa18.97■□□□□ 0.63
PTCHD3-202ENST00000622555 BRD2P25440 801 aaKnown RBP18.97■□□□□ 0.63
PTCHD3-202ENST00000622555 ANXA13P27216 316 aa18.97■□□□□ 0.63
PTCHD3-202ENST00000622555 TERF1P54274 439 aa18.97■□□□□ 0.63
PTCHD3-202ENST00000622555 CDR2Q01850 454 aa18.97■□□□□ 0.63
PTCHD3-202ENST00000622555 ASTE1Q2TB18 679 aaPredicted RBP18.97■□□□□ 0.63
PTCHD3-202ENST00000622555 C9orf50Q5SZB4 431 aa18.97■□□□□ 0.63
PTCHD3-202ENST00000622555 TOGARAM2Q6ZUX3 1019 aa18.97■□□□□ 0.63
PTCHD3-202ENST00000622555 GLYCTKQ8IVS8 523 aa18.97■□□□□ 0.63
PTCHD3-202ENST00000622555 DDX1Q92499 740 aaKnown RBP18.97■□□□□ 0.63
PTCHD3-202ENST00000622555 HEXIM2Q96MH2 286 aaKnown RBP18.97■□□□□ 0.63
PTCHD3-202ENST00000622555 ZNF558Q96NG5 402 aa18.97■□□□□ 0.63
PTCHD3-202ENST00000622555 DESI2Q9BSY9 194 aa18.97■□□□□ 0.63
PTCHD3-202ENST00000622555 SYT11Q9BT88 431 aa18.97■□□□□ 0.63
PTCHD3-202ENST00000622555 DNAI2Q9GZS0 605 aa18.97■□□□□ 0.63
PTCHD3-202ENST00000622555 STXBP5LQ9Y2K9 1186 aa18.97■□□□□ 0.63
PTCHD3-202ENST00000622555 SF3B1O75533 1304 aaKnown RBP eCLIP18.97■□□□□ 0.63
PTCHD3-202ENST00000622555 GABRDO14764 452 aa18.97■□□□□ 0.63
PTCHD3-202ENST00000622555 CYP11A1P05108 521 aa18.97■□□□□ 0.63
PTCHD3-202ENST00000622555 MMEP08473 750 aa18.97■□□□□ 0.63
PTCHD3-202ENST00000622555 CHRNB2P17787 502 aa18.97■□□□□ 0.63
PTCHD3-202ENST00000622555 TYMPP19971 482 aa18.97■□□□□ 0.63
PTCHD3-202ENST00000622555 LMO2P25791 158 aa18.97■□□□□ 0.63
PTCHD3-202ENST00000622555 LHX1P48742 406 aa18.97■□□□□ 0.63
PTCHD3-202ENST00000622555 GFPT1Q06210 699 aaPredicted RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms