RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 MTERF2Q49AM1 385 aa16.63■□□□□ 0.25
NPHP4-211ENST00000622020 KHDC1Q4VXA5 237 aaKnown RBP16.63■□□□□ 0.25
NPHP4-211ENST00000622020 STK32AQ8WU08 396 aa16.63■□□□□ 0.25
NPHP4-211ENST00000622020 ACVR2BQ13705 512 aa16.63■□□□□ 0.25
NPHP4-211ENST00000622020 DSTYKQ6XUX3 929 aa16.63■□□□□ 0.25
NPHP4-211ENST00000622020 C3orf62Q6ZUJ4 267 aa16.63■□□□□ 0.25
NPHP4-211ENST00000622020 RHPN2Q8IUC4 686 aa16.63■□□□□ 0.25
NPHP4-211ENST00000622020 RBBP8NLQ8NC74 664 aaPredicted RBP16.63■□□□□ 0.25
NPHP4-211ENST00000622020 BBOF1Q8ND07 529 aa16.63■□□□□ 0.25
NPHP4-211ENST00000622020 TCP10LQ8TDR4 215 aa16.63■□□□□ 0.25
NPHP4-211ENST00000622020 C10orf82Q8WW14 230 aa16.63■□□□□ 0.25
NPHP4-211ENST00000622020 AVENQ9NQS1 362 aaPredicted RBP16.63■□□□□ 0.25
NPHP4-211ENST00000622020 CYP39A1Q9NYL5 469 aa16.63■□□□□ 0.25
NPHP4-211ENST00000622020 DPPA5A6NC42 116 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 WDR64B1ANS9 1081 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 CYP1A1P04798 512 aaPredicted RBP16.62■□□□□ 0.25
NPHP4-211ENST00000622020 ICAM1P05362 532 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 HSD17B4P51659 736 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 BIRC2Q13490 618 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 PGM5Q15124 567 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 BBS9Q3SYG4 887 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 GNPTABQ3T906 1256 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 THEMIS2Q5TEJ8 643 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 ARHGEF16Q5VV41 709 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 C4orf19Q8IY42 314 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 FEZF2Q8TBJ5 459 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 PTPRN2Q92932 1015 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 CNKSR1Q969H4 720 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 SLITRK1Q96PX8 696 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 HERC5Q9UII4 1024 aaKnown RBP16.62■□□□□ 0.25
NPHP4-211ENST00000622020 UBIAD1Q9Y5Z9 338 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 GPX6P59796 221 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 OGDHQ02218 1023 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 ZBTB16Q05516 673 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 CCDC6Q16204 474 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 MDH1BQ5I0G3 518 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 FNBP1LQ5T0N5 605 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 TAS1R3Q7RTX0 852 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 USP37Q86T82 979 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 KATNAL2Q8IYT4 538 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 OR5B17Q8NGF7 314 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 EXD1Q8NHP7 514 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 PYROXD1Q8WU10 500 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 ZBTB10Q96DT7 871 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 FAM81BQ96LP2 452 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 MRPL47Q9HD33 250 aaKnown RBP16.62■□□□□ 0.25
NPHP4-211ENST00000622020 NUB1Q9Y5A7 615 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 ZNF541Q9H0D2 1346 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 TCRBV7S3A2A0A539 114 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 MAP3K13O43283 966 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 PSTPIP1O43586 416 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 DCTN3O75935 186 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 VNN1O95497 513 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 GNAZP19086 355 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 CETN2P41208 172 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 ANO7Q6IWH7 933 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 SCYL3Q8IZE3 742 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 ABRAQ8N0Z2 381 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 TMC2Q8TDI7 906 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 MIPEPQ99797 713 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 SENP7Q9BQF6 1050 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 HEY2Q9UBP5 337 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 FEM1BQ9UK73 627 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 AGTPBP1Q9UPW5 1226 aa16.62■□□□□ 0.25
NPHP4-211ENST00000622020 CTDP1Q9Y5B0 961 aaPredicted RBP16.62■□□□□ 0.25
NPHP4-211ENST00000622020 SPDYE5A6NIY4 337 aa16.61■□□□□ 0.25
NPHP4-211ENST00000622020 LINGO3P0C6S8 592 aa16.61■□□□□ 0.25
NPHP4-211ENST00000622020 BRD2P25440 801 aaKnown RBP16.61■□□□□ 0.25
NPHP4-211ENST00000622020 BLMHQ13867 455 aa16.61■□□□□ 0.25
NPHP4-211ENST00000622020 DLGAP5Q15398 846 aa16.61■□□□□ 0.25
NPHP4-211ENST00000622020 MUM1Q2TAK8 710 aa16.61■□□□□ 0.25
NPHP4-211ENST00000622020 NBPF20Q3BBV1 942 aa16.61■□□□□ 0.25
NPHP4-211ENST00000622020 SCARA5Q6ZMJ2 495 aa16.61■□□□□ 0.25
NPHP4-211ENST00000622020 CENPUQ71F23 418 aa16.61■□□□□ 0.25
NPHP4-211ENST00000622020 AGGF1Q8N302 714 aaeCLIP16.61■□□□□ 0.25
NPHP4-211ENST00000622020 TTC17Q96AE7 1141 aa16.61■□□□□ 0.25
NPHP4-211ENST00000622020 PPP1R12CQ9BZL4 782 aa16.61■□□□□ 0.25
NPHP4-211ENST00000622020 TBC1D22BQ9NU19 505 aa16.61■□□□□ 0.25
NPHP4-211ENST00000622020 GINM1Q9NU53 330 aa16.61■□□□□ 0.25
NPHP4-211ENST00000622020 ARMCX1Q9P291 453 aa16.61■□□□□ 0.25
NPHP4-211ENST00000622020 ZNF70Q9UC06 446 aaPredicted RBP16.61■□□□□ 0.25
NPHP4-211ENST00000622020 LRRIQ4A6NIV6 560 aa16.61■□□□□ 0.25
NPHP4-211ENST00000622020 TJP3O95049 919 aa16.61■□□□□ 0.25
NPHP4-211ENST00000622020 GTF2H1P32780 548 aa16.61■□□□□ 0.25
NPHP4-211ENST00000622020 CUL2Q13617 745 aa16.61■□□□□ 0.25
NPHP4-211ENST00000622020 TTC7BQ86TV6 843 aa16.61■□□□□ 0.25
NPHP4-211ENST00000622020 LRRN4Q8WUT4 740 aa16.61■□□□□ 0.25
NPHP4-211ENST00000622020 WNK4Q96J92 1243 aa16.61■□□□□ 0.25
NPHP4-211ENST00000622020 ARL8BQ9NVJ2 186 aa16.61■□□□□ 0.25
NPHP4-211ENST00000622020 ACTL7BQ9Y614 415 aa16.61■□□□□ 0.25
NPHP4-211ENST00000622020 POTEJP0CG39 1038 aa16.6■□□□□ 0.25
NPHP4-211ENST00000622020 GLRA2P23416 452 aa16.6■□□□□ 0.25
NPHP4-211ENST00000622020 SKIV2L2P42285 1042 aaKnown RBP16.6■□□□□ 0.25
NPHP4-211ENST00000622020 CTCFP49711 727 aaPredicted RBP16.6■□□□□ 0.25
NPHP4-211ENST00000622020 ZNF252P-AS1Q0IIN9 211 aa16.6■□□□□ 0.25
NPHP4-211ENST00000622020 ORC1Q13415 861 aa16.6■□□□□ 0.25
NPHP4-211ENST00000622020 HIF1AQ16665 826 aa16.6■□□□□ 0.25
NPHP4-211ENST00000622020 FAM160B2Q86V87 743 aa16.6■□□□□ 0.25
NPHP4-211ENST00000622020 OGFOD1Q8N543 542 aa16.6■□□□□ 0.25
NPHP4-211ENST00000622020 ALLCQ8N6M5 410 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms