RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 DNAJB7Q7Z6W7 309 aaPredicted RBP25.91■■□□□ 1.74
ATXN3-253ENST00000621269 TMC8Q8IU68 726 aa25.91■■□□□ 1.74
ATXN3-253ENST00000621269 BRSK2Q8IWQ3 736 aa25.91■■□□□ 1.74
ATXN3-253ENST00000621269 FAM200AQ8TCP9 573 aa25.91■■□□□ 1.74
ATXN3-253ENST00000621269 DEPDC1BQ8WUY9 529 aa25.91■■□□□ 1.74
ATXN3-253ENST00000621269 PSMG2Q969U7 264 aa25.91■■□□□ 1.74
ATXN3-253ENST00000621269 E2F7Q96AV8 911 aa25.91■■□□□ 1.74
ATXN3-253ENST00000621269 SEPT5Q99719 369 aaPredicted RBP25.91■■□□□ 1.74
ATXN3-253ENST00000621269 LRRC3Q9BY71 257 aa25.91■■□□□ 1.74
ATXN3-253ENST00000621269 FGFBP2Q9BYJ0 223 aa25.91■■□□□ 1.74
ATXN3-253ENST00000621269 TNMDQ9H2S6 317 aa25.91■■□□□ 1.74
ATXN3-253ENST00000621269 TRPV4Q9HBA0 871 aa25.91■■□□□ 1.74
ATXN3-253ENST00000621269 SPATA6Q9NWH7 488 aaPredicted RBP25.91■■□□□ 1.74
ATXN3-253ENST00000621269 EXTL3O43909 919 aa25.9■■□□□ 1.74
ATXN3-253ENST00000621269 SOAT2O75908 522 aa25.9■■□□□ 1.74
ATXN3-253ENST00000621269 PRPF6O94906 941 aaKnown RBP25.9■■□□□ 1.74
ATXN3-253ENST00000621269 GDI1P31150 447 aa25.9■■□□□ 1.74
ATXN3-253ENST00000621269 MAGEA9P43362 315 aa25.9■■□□□ 1.74
ATXN3-253ENST00000621269 AMPD3Q01432 767 aa25.9■■□□□ 1.74
ATXN3-253ENST00000621269 VEPH1Q14D04 833 aa25.9■■□□□ 1.74
ATXN3-253ENST00000621269 MGAT5BQ3V5L5 792 aa25.9■■□□□ 1.74
ATXN3-253ENST00000621269 WSCD1Q658N2 575 aa25.9■■□□□ 1.74
ATXN3-253ENST00000621269 HSCBQ8IWL3 235 aa25.9■■□□□ 1.74
ATXN3-253ENST00000621269 TTC9BQ8N6N2 239 aa25.9■■□□□ 1.74
ATXN3-253ENST00000621269 ZSWIM2Q8NEG5 633 aa25.9■■□□□ 1.74
ATXN3-253ENST00000621269 C2orf15Q8WU43 125 aaKnown RBP25.9■■□□□ 1.74
ATXN3-253ENST00000621269 SEMA4AQ9H3S1 761 aa25.9■■□□□ 1.74
ATXN3-253ENST00000621269 CUEDC2Q9H467 287 aa25.9■■□□□ 1.74
ATXN3-253ENST00000621269 PCIF1Q9H4Z3 704 aa25.9■■□□□ 1.74
ATXN3-253ENST00000621269 CACNA1HO95180 2353 aa25.89■■□□□ 1.74
ATXN3-253ENST00000621269 GOLGA8IPA6NC78 632 aa25.89■■□□□ 1.74
ATXN3-253ENST00000621269 GOLGA8JA6NMD2 632 aa25.89■■□□□ 1.74
ATXN3-253ENST00000621269 YEATS4O95619 227 aa25.89■■□□□ 1.74
ATXN3-253ENST00000621269 SP9P0CG40 484 aa25.89■■□□□ 1.74
ATXN3-253ENST00000621269 PDIA4P13667 645 aaKnown RBP25.89■■□□□ 1.74
ATXN3-253ENST00000621269 SMARCB1Q12824 385 aa25.89■■□□□ 1.74
ATXN3-253ENST00000621269 FOXD4L5Q5VV16 416 aaPredicted RBP25.89■■□□□ 1.74
ATXN3-253ENST00000621269 ZC3H14Q6PJT7 736 aaKnown RBP25.89■■□□□ 1.74
ATXN3-253ENST00000621269 DCP1BQ8IZD4 617 aaKnown RBP25.89■■□□□ 1.74
ATXN3-253ENST00000621269 KCNG4Q8TDN1 519 aa25.89■■□□□ 1.74
ATXN3-253ENST00000621269 FOXD4L4Q8WXT5 416 aaPredicted RBP25.89■■□□□ 1.74
ATXN3-253ENST00000621269 BORCS6Q96GS4 357 aa25.89■■□□□ 1.74
ATXN3-253ENST00000621269 CBWD1Q9BRT8 395 aa25.89■■□□□ 1.74
ATXN3-253ENST00000621269 ATXN3LQ9H3M9 355 aa25.89■■□□□ 1.74
ATXN3-253ENST00000621269 AGAP1Q9UPQ3 857 aa25.89■■□□□ 1.74
ATXN3-253ENST00000621269 COL4A3Q01955 1670 aa25.89■■□□□ 1.73
ATXN3-253ENST00000621269 ZFHX2Q9C0A1 2572 aaPredicted RBP25.88■■□□□ 1.73
ATXN3-253ENST00000621269 ANK1P16157 1881 aa25.88■■□□□ 1.73
ATXN3-253ENST00000621269 MAN2B1O00754 1011 aa25.88■■□□□ 1.73
ATXN3-253ENST00000621269 ZNF263O14978 683 aa25.88■■□□□ 1.73
ATXN3-253ENST00000621269 LAMTOR5O43504 91 aa25.88■■□□□ 1.73
ATXN3-253ENST00000621269 CUTAO60888 179 aa25.88■■□□□ 1.73
ATXN3-253ENST00000621269 ITGB3P05106 788 aa25.88■■□□□ 1.73
ATXN3-253ENST00000621269 POLR2BP30876 1174 aaKnown RBP25.88■■□□□ 1.73
ATXN3-253ENST00000621269 WNT7BP56706 349 aa25.88■■□□□ 1.73
ATXN3-253ENST00000621269 TAF12Q16514 161 aa25.88■■□□□ 1.73
ATXN3-253ENST00000621269 MFSD6LQ8IWD5 586 aa25.88■■□□□ 1.73
ATXN3-253ENST00000621269 YAF2Q8IY57 180 aa25.88■■□□□ 1.73
ATXN3-253ENST00000621269 IQUBQ8NA54 791 aa25.88■■□□□ 1.73
ATXN3-253ENST00000621269 DHX58Q96C10 678 aa25.88■■□□□ 1.73
ATXN3-253ENST00000621269 ZNF334Q9HCZ1 680 aaPredicted RBP25.88■■□□□ 1.73
ATXN3-253ENST00000621269 TRPV5Q9NQA5 729 aa25.88■■□□□ 1.73
ATXN3-253ENST00000621269 KBTBD4Q9NVX7 518 aa25.88■■□□□ 1.73
ATXN3-253ENST00000621269 R4GN57 208 aa25.88■■□□□ 1.73
ATXN3-253ENST00000621269 MYO15AQ9UKN7 3530 aa25.88■■□□□ 1.73
ATXN3-253ENST00000621269 HEPACAM2A8MVW5 462 aa25.87■■□□□ 1.73
ATXN3-253ENST00000621269 KIAA0391O15091 583 aaKnown RBP25.87■■□□□ 1.73
ATXN3-253ENST00000621269 TARSP26639 723 aaKnown RBP25.87■■□□□ 1.73
ATXN3-253ENST00000621269 CDR1P51861 262 aa25.87■■□□□ 1.73
ATXN3-253ENST00000621269 E2F4Q16254 413 aa25.87■■□□□ 1.73
ATXN3-253ENST00000621269 ARHGAP15Q53QZ3 475 aa25.87■■□□□ 1.73
ATXN3-253ENST00000621269 ADSSL1Q8N142 457 aa25.87■■□□□ 1.73
ATXN3-253ENST00000621269 GPD1LQ8N335 351 aa25.87■■□□□ 1.73
ATXN3-253ENST00000621269 CSGALNACT2Q8N6G5 542 aa25.87■■□□□ 1.73
ATXN3-253ENST00000621269 C1orf127Q8N9H9 656 aa25.87■■□□□ 1.73
ATXN3-253ENST00000621269 SPPL2BQ8TCT7 592 aa25.87■■□□□ 1.73
ATXN3-253ENST00000621269 ITGA11Q9UKX5 1188 aa25.87■■□□□ 1.73
ATXN3-253ENST00000621269 TSC2P49815 1807 aa25.86■■□□□ 1.73
ATXN3-253ENST00000621269 HUS1O60921 280 aa25.86■■□□□ 1.73
ATXN3-253ENST00000621269 KRT19P08727 400 aa25.86■■□□□ 1.73
ATXN3-253ENST00000621269 GABRR2P28476 465 aa25.86■■□□□ 1.73
ATXN3-253ENST00000621269 ASIC1P78348 528 aa25.86■■□□□ 1.73
ATXN3-253ENST00000621269 TSPY1Q01534 308 aa25.86■■□□□ 1.73
ATXN3-253ENST00000621269 LRRTM3Q86VH5 581 aa25.86■■□□□ 1.73
ATXN3-253ENST00000621269 CLDN23Q96B33 292 aa25.86■■□□□ 1.73
ATXN3-253ENST00000621269 LPIN3Q9BQK8 851 aa25.86■■□□□ 1.73
ATXN3-253ENST00000621269 TRIM9Q9C026 710 aa25.86■■□□□ 1.73
ATXN3-253ENST00000621269 PDE11AQ9HCR9 933 aa25.86■■□□□ 1.73
ATXN3-253ENST00000621269 ABI2Q9NYB9 513 aaPredicted RBP25.86■■□□□ 1.73
ATXN3-253ENST00000621269 R3HCC1Q9Y3T6 440 aaKnown RBP25.86■■□□□ 1.73
ATXN3-253ENST00000621269 DPYSL4O14531 572 aa25.85■■□□□ 1.73
ATXN3-253ENST00000621269 LMNAP02545 664 aaKnown RBP25.85■■□□□ 1.73
ATXN3-253ENST00000621269 TMEM191BP0C7N4 346 aa25.85■■□□□ 1.73
ATXN3-253ENST00000621269 ZSCAN22P10073 491 aaPredicted RBP25.85■■□□□ 1.73
ATXN3-253ENST00000621269 RPS9P46781 194 aaKnown RBP25.85■■□□□ 1.73
ATXN3-253ENST00000621269 RBP5P82980 135 aa25.85■■□□□ 1.73
ATXN3-253ENST00000621269 BFSP1Q12934 665 aa25.85■■□□□ 1.73
ATXN3-253ENST00000621269 FOXD4L6Q3SYB3 417 aaPredicted RBP25.85■■□□□ 1.73
ATXN3-253ENST00000621269 STXBP5Q5T5C0 1151 aa25.85■■□□□ 1.73
ATXN3-253ENST00000621269 GPR158Q5T848 1215 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms