RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 ABLIM1O14639 778 aa20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 BANF1O75531 89 aa20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 KRT4P19013 534 aa20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 CTCFP49711 727 aaPredicted RBP20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 GPX6P59796 221 aa20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 MRPS35P82673 323 aaKnown RBP20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 ENPEPQ07075 957 aa20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 FYB2Q5VWT5 728 aa20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 RFWD3Q6PCD5 774 aa20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 TRIM72Q6ZMU5 477 aa20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 NLRX1Q86UT6 975 aa20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 PHF13Q86YI8 300 aaPredicted RBP20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 ABRAQ8N0Z2 381 aa20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 ZNF276Q8N554 614 aa20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 VCPIP1Q96JH7 1222 aa20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 DCLRE1BQ9H816 532 aa20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 ANKEF1Q9NU02 776 aa20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 SPATS2LQ9NUQ6 558 aaKnown RBP20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 CCPG1Q9ULG6 757 aa20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 SCINQ9Y6U3 715 aa20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 ENO4A6NNW6 628 aa20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 ZBED4O75132 1171 aa20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 ATF7P17544 494 aaPredicted RBP20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 ADRA1DP25100 572 aa20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 RXRBP28702 533 aa20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 CETN2P41208 172 aa20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 TUBP50607 506 aa20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 SOX10P56693 466 aa20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 PDIA2Q13087 525 aaKnown RBP20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 CC2D2BQ6DHV5 1058 aa20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 SPOPLQ6IQ16 392 aa20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 C4orf50Q6ZRC1 276 aa20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 DNAJC9Q8WXX5 260 aa20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 RBM41Q96IZ5 413 aaKnown RBP20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 TBC1D22BQ9NU19 505 aa20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 FEM1BQ9UK73 627 aa20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 SHOC2Q9UQ13 582 aa20.65■□□□□ 0.9
PDLIM3-212ENST00000620787 CLUHO75153 1309 aa20.64■□□□□ 0.9
PDLIM3-212ENST00000620787 HNRNPCL1O60812 293 aaKnown RBP20.64■□□□□ 0.89
PDLIM3-212ENST00000620787 HLA-DRAP01903 254 aa20.64■□□□□ 0.89
PDLIM3-212ENST00000620787 LMNAP02545 664 aaKnown RBP20.64■□□□□ 0.89
PDLIM3-212ENST00000620787 PDHA1P08559 390 aa20.64■□□□□ 0.89
PDLIM3-212ENST00000620787 NOP14P78316 857 aaKnown RBP20.64■□□□□ 0.89
PDLIM3-212ENST00000620787 OASLQ15646 514 aaKnown RBP20.64■□□□□ 0.89
PDLIM3-212ENST00000620787 CENPUQ71F23 418 aa20.64■□□□□ 0.89
PDLIM3-212ENST00000620787 RFWD2Q8NHY2 731 aa20.64■□□□□ 0.89
PDLIM3-212ENST00000620787 FEZF2Q8TBJ5 459 aa20.64■□□□□ 0.89
PDLIM3-212ENST00000620787 SPIRE2Q8WWL2 714 aa20.64■□□□□ 0.89
PDLIM3-212ENST00000620787 CLEC4DQ8WXI8 215 aa20.64■□□□□ 0.89
PDLIM3-212ENST00000620787 NTPCRQ9BSD7 190 aaKnown RBP20.64■□□□□ 0.89
PDLIM3-212ENST00000620787 CADM1Q9BY67 442 aaKnown RBP20.64■□□□□ 0.89
PDLIM3-212ENST00000620787 TMX4Q9H1E5 349 aaPredicted RBP20.64■□□□□ 0.89
PDLIM3-212ENST00000620787 ANKFY1Q9P2R3 1169 aa20.64■□□□□ 0.89
PDLIM3-212ENST00000620787 DRG1Q9Y295 367 aaKnown RBP20.64■□□□□ 0.89
PDLIM3-212ENST00000620787 TJP3O95049 919 aa20.64■□□□□ 0.89
PDLIM3-212ENST00000620787 CCNE2O96020 404 aa20.64■□□□□ 0.89
PDLIM3-212ENST00000620787 KRT1P04264 644 aa20.64■□□□□ 0.89
PDLIM3-212ENST00000620787 ICAM1P05362 532 aa20.64■□□□□ 0.89
PDLIM3-212ENST00000620787 VCPP55072 806 aaKnown RBP20.64■□□□□ 0.89
PDLIM3-212ENST00000620787 GEMIN4P57678 1058 aaKnown RBP20.64■□□□□ 0.89
PDLIM3-212ENST00000620787 EFTUD2Q15029 972 aaKnown RBP eCLIP20.64■□□□□ 0.89
PDLIM3-212ENST00000620787 TSNAXIP1Q2TAA8 658 aa20.64■□□□□ 0.89
PDLIM3-212ENST00000620787 WDR72Q3MJ13 1102 aa20.64■□□□□ 0.89
PDLIM3-212ENST00000620787 ANO5Q75V66 913 aa20.64■□□□□ 0.89
PDLIM3-212ENST00000620787 ANKMY2Q8IV38 441 aa20.64■□□□□ 0.89
PDLIM3-212ENST00000620787 SENP7Q9BQF6 1050 aa20.64■□□□□ 0.89
PDLIM3-212ENST00000620787 RABGEF1Q9UJ41 708 aa20.64■□□□□ 0.89
PDLIM3-212ENST00000620787 HNRNPDLO14979 420 aaKnown RBP20.63■□□□□ 0.89
PDLIM3-212ENST00000620787 GARTP22102 1010 aa20.63■□□□□ 0.89
PDLIM3-212ENST00000620787 WNT7BP56706 349 aa20.63■□□□□ 0.89
PDLIM3-212ENST00000620787 C1QBPQ07021 282 aaKnown RBP20.63■□□□□ 0.89
PDLIM3-212ENST00000620787 KHDC1Q4VXA5 237 aaKnown RBP20.63■□□□□ 0.89
PDLIM3-212ENST00000620787 WDR44Q5JSH3 913 aa20.63■□□□□ 0.89
PDLIM3-212ENST00000620787 RBBP8NLQ8NC74 664 aaPredicted RBP20.63■□□□□ 0.89
PDLIM3-212ENST00000620787 ZNF333Q96JL9 665 aa20.63■□□□□ 0.89
PDLIM3-212ENST00000620787 IP6K2Q9UHH9 426 aa20.63■□□□□ 0.89
PDLIM3-212ENST00000620787 DCTN4Q9UJW0 460 aa20.63■□□□□ 0.89
PDLIM3-212ENST00000620787 ATP9AO75110 1047 aa20.63■□□□□ 0.89
PDLIM3-212ENST00000620787 TROVE2P10155 538 aaKnown RBP eCLIP20.63■□□□□ 0.89
PDLIM3-212ENST00000620787 CALRP27797 417 aaKnown RBP20.63■□□□□ 0.89
PDLIM3-212ENST00000620787 GNA15P30679 374 aa20.63■□□□□ 0.89
PDLIM3-212ENST00000620787 PTGER2P43116 358 aa20.63■□□□□ 0.89
PDLIM3-212ENST00000620787 RPL7AP62424 266 aaKnown RBP20.63■□□□□ 0.89
PDLIM3-212ENST00000620787 CLDN10P78369 228 aa20.63■□□□□ 0.89
PDLIM3-212ENST00000620787 ZACNQ401N2 412 aa20.63■□□□□ 0.89
PDLIM3-212ENST00000620787 BRDTQ58F21 947 aaPredicted RBP20.63■□□□□ 0.89
PDLIM3-212ENST00000620787 TDRD10Q5VZ19 366 aaKnown RBP20.63■□□□□ 0.89
PDLIM3-212ENST00000620787 SPOCD1Q6ZMY3 1216 aa20.63■□□□□ 0.89
PDLIM3-212ENST00000620787 SAMD3Q8N6K7 520 aa20.63■□□□□ 0.89
PDLIM3-212ENST00000620787 MZB1Q8WU39 189 aa20.63■□□□□ 0.89
PDLIM3-212ENST00000620787 WDR91A4D1P6 747 aa20.62■□□□□ 0.89
PDLIM3-212ENST00000620787 GLRA2P23416 452 aa20.62■□□□□ 0.89
PDLIM3-212ENST00000620787 MCL1Q07820 350 aa20.62■□□□□ 0.89
PDLIM3-212ENST00000620787 ZNF252P-AS1Q0IIN9 211 aa20.62■□□□□ 0.89
PDLIM3-212ENST00000620787 OVGP1Q12889 678 aa20.62■□□□□ 0.89
PDLIM3-212ENST00000620787 LBRQ14739 615 aaKnown RBP20.62■□□□□ 0.89
PDLIM3-212ENST00000620787 SGSM1Q2NKQ1 1148 aa20.62■□□□□ 0.89
PDLIM3-212ENST00000620787 DSTYKQ6XUX3 929 aa20.62■□□□□ 0.89
PDLIM3-212ENST00000620787 CFAP61Q8NHU2 1237 aa20.62■□□□□ 0.89
PDLIM3-212ENST00000620787 PTCD3Q96EY7 689 aaKnown RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms