RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 CDY1Q9Y6F8 540 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 TMEM247A6NEH6 219 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 FAM155BO75949 473 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 STK32CQ86UX6 486 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 MICU2Q8IYU8 434 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 VCPIP1Q96JH7 1222 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 ZBTB45Q96K62 511 aaPredicted RBP3.22□□□□□ -1.89
NEB-220ENST00000618972 C9orf72Q96LT7 481 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 PRMT1Q99873 361 aaKnown RBP3.22□□□□□ -1.89
NEB-220ENST00000618972 TAS2R1Q9NYW7 299 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 PCDHA4Q9UN74 947 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 DISP1Q96F81 1524 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 POGZQ7Z3K3 1410 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 DPPA5A6NC42 116 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 CES2O00748 559 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 ACAT1P24752 427 aaKnown RBP3.22□□□□□ -1.89
NEB-220ENST00000618972 ITGB3BPQ13352 177 aaPredicted RBP3.22□□□□□ -1.89
NEB-220ENST00000618972 RINT1Q6NUQ1 792 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 IYDQ6PHW0 289 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 ANGPTL8Q6UXH0 198 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 SETD3Q86TU7 594 aaPredicted RBP3.22□□□□□ -1.89
NEB-220ENST00000618972 RXFP1Q9HBX9 757 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 GIN1Q9NXP7 522 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 PTGIRP43119 386 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 ARHGDIBP52566 201 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 LONRF1Q17RB8 773 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 ABCB5Q2M3G0 1257 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 NET1Q7Z628 596 aaPredicted RBP3.22□□□□□ -1.89
NEB-220ENST00000618972 ERICH1Q86X53 443 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 TRIM9Q9C026 710 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 PIK3CDO00329 1044 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 CRTAPO75718 401 aaPredicted RBP3.22□□□□□ -1.89
NEB-220ENST00000618972 ALOX5P09917 674 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 TRIM25Q14258 630 aaKnown RBP3.22□□□□□ -1.89
NEB-220ENST00000618972 MYCBPAPQ8TBZ2 947 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 MEI4A8MW99 385 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 MAGEB3O15480 346 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 RTN2O75298 545 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 VCLP18206 1134 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 DGUOKQ16854 277 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 CCDC117Q8IWD4 279 aaPredicted RBP3.22□□□□□ -1.89
NEB-220ENST00000618972 DNAJC19Q96DA6 116 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 NAT9Q9BTE0 207 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 HMG20AQ9NP66 347 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 TTC7AQ9ULT0 858 aaPredicted RBP3.22□□□□□ -1.89
NEB-220ENST00000618972 SPCS2Q15005 226 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 MYLK4Q86YV6 388 aaPredicted RBP3.22□□□□□ -1.89
NEB-220ENST00000618972 FAR2Q96K12 515 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 VPS11Q9H270 941 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 MKLN1Q9UL63 735 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 TRIM17Q9Y577 477 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 CACNA1DQ01668 2161 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 NUMBP49757 651 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 ZNF394Q53GI3 561 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 SDE2Q6IQ49 451 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 NAT16Q8N8M0 369 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 HIPK4Q8NE63 616 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 BLOC1S5Q8TDH9 187 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 CASP10Q92851 521 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 C18orf8Q96DM3 657 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 TRIM54Q9BYV2 358 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 KBTBD4Q9NVX7 518 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 RIMS2Q9UQ26 1411 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 SNPHO15079 494 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 ACSL3O95573 720 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 ITGB3P05106 788 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 FCHO2Q0JRZ9 810 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 SF3B3Q15393 1217 aaKnown RBP3.22□□□□□ -1.89
NEB-220ENST00000618972 EPS8L3Q8TE67 593 aaKnown RBP3.22□□□□□ -1.89
NEB-220ENST00000618972 ASZ1Q8WWH4 475 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 EMILIN3Q9NT22 766 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 ZFATQ9P243 1243 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 FAM32AQ9Y421 112 aaKnown RBP3.22□□□□□ -1.89
NEB-220ENST00000618972 METTL21EPA6NDL7 271 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 PGRMC1O00264 195 aaKnown RBP3.22□□□□□ -1.89
NEB-220ENST00000618972 GSTA4O15217 222 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 FGGP02679 453 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 CNTFP26441 200 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 PARP6Q2NL67 630 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 NT5DC1Q5TFE4 455 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 MZT2BQ6NZ67 158 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 C16orf89Q6UX73 402 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 NANOGNBQ7Z5D8 188 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 HAVCR1Q96D42 359 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 OSGEPQ9NPF4 335 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 PCDHGB4Q9UN71 923 aa3.22□□□□□ -1.89
NEB-220ENST00000618972 MAGED2Q9UNF1 606 aaPredicted RBP3.22□□□□□ -1.89
NEB-220ENST00000618972 SPDYE5A6NIY4 337 aa3.21□□□□□ -1.89
NEB-220ENST00000618972 KRT20P35900 424 aa3.21□□□□□ -1.89
NEB-220ENST00000618972 ALCAMQ13740 583 aa3.21□□□□□ -1.89
NEB-220ENST00000618972 PRKG1Q13976 671 aa3.21□□□□□ -1.89
NEB-220ENST00000618972 PFKFB3Q16875 520 aaPredicted RBP3.21□□□□□ -1.89
NEB-220ENST00000618972 ENOSF1Q7L5Y1 443 aa3.21□□□□□ -1.89
NEB-220ENST00000618972 MINDY2Q8NBR6 621 aa3.21□□□□□ -1.89
NEB-220ENST00000618972 KCTD6Q8NC69 237 aa3.21□□□□□ -1.89
NEB-220ENST00000618972 LARP4BQ92615 738 aaKnown RBP3.21□□□□□ -1.89
NEB-220ENST00000618972 SLC10A4Q96EP9 437 aa3.21□□□□□ -1.89
NEB-220ENST00000618972 TRPV6Q9H1D0 765 aa3.21□□□□□ -1.89
NEB-220ENST00000618972 SH3GLB2Q9NR46 395 aa3.21□□□□□ -1.89
NEB-220ENST00000618972 DLGAP2Q9P1A6 1054 aa3.21□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms