RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-223ENST00000618944 NLRP4Q96MN2 994 aa11.86□□□□□ -0.51
TP53-223ENST00000618944 SLITRK1Q96PX8 696 aa11.86□□□□□ -0.51
TP53-223ENST00000618944 RBM15Q96T37 977 aaKnown RBP eCLIP11.86□□□□□ -0.51
TP53-223ENST00000618944 C10orf88Q9H8K7 445 aa11.86□□□□□ -0.51
TP53-223ENST00000618944 HAUS2Q9NVX0 235 aa11.86□□□□□ -0.51
TP53-223ENST00000618944 SAMD15Q9P1V8 674 aa11.86□□□□□ -0.51
TP53-223ENST00000618944 SAE1Q9UBE0 346 aaPredicted RBP11.86□□□□□ -0.51
TP53-223ENST00000618944 NAALADL1Q9UQQ1 740 aa11.86□□□□□ -0.51
TP53-223ENST00000618944 ASAP2O43150 1006 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 B4GALT5O43286 388 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 LIASO43766 372 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 FAM189A1O60320 539 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 PRKCBP05771 671 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 KRT19P08727 400 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 KLRC2P26717 231 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 CETN2P41208 172 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 RAP1GAPP47736 663 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 MNAT1P51948 309 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 ZNF132P52740 706 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 NEDD9Q14511 834 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 ERICH1Q86X53 443 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 WDR49Q8IV35 697 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 SRRM1Q8IYB3 904 aaKnown RBP11.85□□□□□ -0.51
TP53-223ENST00000618944 ANKS4BQ8N8V4 417 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 SLC40A1Q9NP59 571 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 SAYSD1Q9NPB0 183 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 GPRC5DQ9NZD1 345 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 TJP2Q9UDY2 1190 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 POLIQ9UNA4 740 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.85□□□□□ -0.51
TP53-223ENST00000618944 SNCAIPQ9Y6H5 919 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 RLFQ13129 1914 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 PHIPQ8WWQ0 1821 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 LRRD1A4D1F6 860 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 CSDE1O75534 798 aaKnown RBP11.85□□□□□ -0.51
TP53-223ENST00000618944 TJP3O95049 919 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 MAGEA4P43358 317 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 ARSEP51690 589 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 CDH8P55286 799 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 DYNLT1P63172 113 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 GPS1Q13098 491 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 MAPK6Q16659 721 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 SGSM1Q2NKQ1 1148 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 FAM133BQ5BKY9 247 aaKnown RBP11.85□□□□□ -0.51
TP53-223ENST00000618944 ICE2Q659A1 982 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 HIBCHQ6NVY1 386 aaPredicted RBP11.85□□□□□ -0.51
TP53-223ENST00000618944 ZPBP2Q6X784 338 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 TAB3Q8N5C8 712 aaPredicted RBP11.85□□□□□ -0.51
TP53-223ENST00000618944 TMEM35BQ8NCS4 154 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 ADAM33Q9BZ11 813 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 SPATC1LQ9H0A9 340 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 FGFR1OP2Q9NVK5 253 aa11.85□□□□□ -0.51
TP53-223ENST00000618944 INO80B-WBP1J3KQ70 363 aa11.84□□□□□ -0.51
TP53-223ENST00000618944 NOP56O00567 594 aaKnown RBP11.84□□□□□ -0.51
TP53-223ENST00000618944 IFNB1P01574 187 aa11.84□□□□□ -0.51
TP53-223ENST00000618944 CD19P15391 556 aa11.84□□□□□ -0.51
TP53-223ENST00000618944 SMTNL2Q2TAL5 461 aa11.84□□□□□ -0.51
TP53-223ENST00000618944 ZNF699Q32M78 642 aa11.84□□□□□ -0.51
TP53-223ENST00000618944 SH3D19Q5HYK7 790 aa11.84□□□□□ -0.51
TP53-223ENST00000618944 KCNT1Q5JUK3 1230 aa11.84□□□□□ -0.51
TP53-223ENST00000618944 DENND1BQ6P3S1 775 aa11.84□□□□□ -0.51
TP53-223ENST00000618944 METTL7BQ6UX53 244 aa11.84□□□□□ -0.51
TP53-223ENST00000618944 SPOCD1Q6ZMY3 1216 aa11.84□□□□□ -0.51
TP53-223ENST00000618944 TMEM192Q8IY95 271 aa11.84□□□□□ -0.51
TP53-223ENST00000618944 UBR7Q8N806 425 aa11.84□□□□□ -0.51
TP53-223ENST00000618944 COPS5Q92905 334 aa11.84□□□□□ -0.51
TP53-223ENST00000618944 PPP1R16BQ96T49 567 aa11.84□□□□□ -0.51
TP53-223ENST00000618944 TMEM121Q9BTD3 319 aa11.84□□□□□ -0.51
TP53-223ENST00000618944 INO80BQ9C086 356 aaPredicted RBP11.84□□□□□ -0.51
TP53-223ENST00000618944 NIF3L1Q9GZT8 377 aa11.84□□□□□ -0.51
TP53-223ENST00000618944 KDM4CQ9H3R0 1056 aa11.84□□□□□ -0.51
TP53-223ENST00000618944 ZWILCHQ9H900 591 aa11.84□□□□□ -0.51
TP53-223ENST00000618944 ACTR5Q9H9F9 607 aaPredicted RBP11.84□□□□□ -0.51
TP53-223ENST00000618944 PCNTO95613 3336 aa11.84□□□□□ -0.51
TP53-223ENST00000618944 GOLGA8MH3BSY2 632 aa11.84□□□□□ -0.51
TP53-223ENST00000618944 OGTO15294 1046 aa11.84□□□□□ -0.51
TP53-223ENST00000618944 CALB1P05937 261 aa11.84□□□□□ -0.51
TP53-223ENST00000618944 EFNA5P52803 228 aa11.84□□□□□ -0.51
TP53-223ENST00000618944 FASTKD3Q14CZ7 662 aaKnown RBP11.84□□□□□ -0.51
TP53-223ENST00000618944 NOL9Q5SY16 702 aaKnown RBP11.84□□□□□ -0.51
TP53-223ENST00000618944 IER5Q5VY09 327 aa11.84□□□□□ -0.51
TP53-223ENST00000618944 RIOX2Q8IUF8 465 aa11.84□□□□□ -0.51
TP53-223ENST00000618944 RBM41Q96IZ5 413 aaKnown RBP11.84□□□□□ -0.51
TP53-223ENST00000618944 PAIP2Q9BPZ3 127 aaKnown RBP11.84□□□□□ -0.51
TP53-223ENST00000618944 KLC4Q9NSK0 619 aa11.84□□□□□ -0.51
TP53-223ENST00000618944 CPSF3Q9UKF6 684 aaKnown RBP11.84□□□□□ -0.51
TP53-223ENST00000618944 POC1B-GALNT4F8VUJ3 575 aa11.83□□□□□ -0.52
TP53-223ENST00000618944 HGSO14964 777 aaPredicted RBP11.83□□□□□ -0.52
TP53-223ENST00000618944 RASSF9O75901 435 aa11.83□□□□□ -0.52
TP53-223ENST00000618944 EDNRBP24530 442 aa11.83□□□□□ -0.52
TP53-223ENST00000618944 RFC1P35251 1148 aaPredicted RBP11.83□□□□□ -0.52
TP53-223ENST00000618944 IRX3P78415 501 aaPredicted RBP11.83□□□□□ -0.52
TP53-223ENST00000618944 LACTBP83111 547 aaPredicted RBP11.83□□□□□ -0.52
TP53-223ENST00000618944 TMED2Q15363 201 aa11.83□□□□□ -0.52
TP53-223ENST00000618944 ZKSCAN8Q15776 578 aaPredicted RBP11.83□□□□□ -0.52
TP53-223ENST00000618944 FAM182AQ5T1J6 154 aa11.83□□□□□ -0.52
TP53-223ENST00000618944 WDR78Q5VTH9 848 aa11.83□□□□□ -0.52
TP53-223ENST00000618944 EEF1DP3Q658K8 133 aa11.83□□□□□ -0.52
TP53-223ENST00000618944 NUGGCQ68CJ6 796 aa11.83□□□□□ -0.52
TP53-223ENST00000618944 ZBTB8OSQ8IWT0 167 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms