RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 TAS2R1Q9NYW7 299 aa13.87□□□□□ -0.19
MSH6-214ENST00000616033 NOCTQ9UK39 431 aaKnown RBP13.87□□□□□ -0.19
MSH6-214ENST00000616033 PACSIN3Q9UKS6 424 aa13.87□□□□□ -0.19
MSH6-214ENST00000616033 IKBKGQ9Y6K9 419 aa13.87□□□□□ -0.19
MSH6-214ENST00000616033 DLEC1Q9Y238 1755 aa13.87□□□□□ -0.19
MSH6-214ENST00000616033 LRP5O75197 1615 aa13.87□□□□□ -0.19
MSH6-214ENST00000616033 HNRNPRO43390 633 aaKnown RBP13.87□□□□□ -0.19
MSH6-214ENST00000616033 C1orf146Q5VVC0 180 aa13.87□□□□□ -0.19
MSH6-214ENST00000616033 OR52E8Q6IFG1 317 aa13.87□□□□□ -0.19
MSH6-214ENST00000616033 IRGCQ6NXR0 463 aa13.87□□□□□ -0.19
MSH6-214ENST00000616033 C3orf62Q6ZUJ4 267 aa13.87□□□□□ -0.19
MSH6-214ENST00000616033 NT5C1BQ96P26 610 aa13.87□□□□□ -0.19
MSH6-214ENST00000616033 HOMER2Q9NSB8 354 aa13.87□□□□□ -0.19
MSH6-214ENST00000616033 LTBP4Q8N2S1 1624 aa13.87□□□□□ -0.19
MSH6-214ENST00000616033 WFS1O76024 890 aa13.87□□□□□ -0.19
MSH6-214ENST00000616033 NPTXRO95502 500 aa13.87□□□□□ -0.19
MSH6-214ENST00000616033 KRT1P04264 644 aa13.87□□□□□ -0.19
MSH6-214ENST00000616033 ACVR2BQ13705 512 aa13.87□□□□□ -0.19
MSH6-214ENST00000616033 BMT2Q1RMZ1 405 aa13.87□□□□□ -0.19
MSH6-214ENST00000616033 SYDE2Q5VT97 1194 aa13.87□□□□□ -0.19
MSH6-214ENST00000616033 PRR5LQ6MZQ0 368 aa13.87□□□□□ -0.19
MSH6-214ENST00000616033 DNAJC1Q96KC8 554 aaKnown RBP13.87□□□□□ -0.19
MSH6-214ENST00000616033 IQCGQ9H095 443 aaKnown RBP13.87□□□□□ -0.19
MSH6-214ENST00000616033 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.87□□□□□ -0.19
MSH6-214ENST00000616033 ANKRD36CQ5JPF3 1778 aa13.86□□□□□ -0.19
MSH6-214ENST00000616033 SNHG28P0DPA3 235 aa13.86□□□□□ -0.19
MSH6-214ENST00000616033 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.86□□□□□ -0.19
MSH6-214ENST00000616033 OTOP1Q7RTM1 612 aa13.86□□□□□ -0.19
MSH6-214ENST00000616033 LRRN4Q8WUT4 740 aa13.86□□□□□ -0.19
MSH6-214ENST00000616033 PYDC1Q8WXC3 89 aa13.86□□□□□ -0.19
MSH6-214ENST00000616033 FAM20AQ96MK3 541 aa13.86□□□□□ -0.19
MSH6-214ENST00000616033 LARSQ9P2J5 1176 aaKnown RBP13.86□□□□□ -0.19
MSH6-214ENST00000616033 TRPC5Q9UL62 973 aaPredicted RBP13.86□□□□□ -0.19
MSH6-214ENST00000616033 SLC4A7Q9Y6M7 1214 aa13.86□□□□□ -0.19
MSH6-214ENST00000616033 A6NJR5 290 aa13.86□□□□□ -0.19
MSH6-214ENST00000616033 MAP3K6O95382 1288 aa13.86□□□□□ -0.19
MSH6-214ENST00000616033 GCAP28676 217 aa13.86□□□□□ -0.19
MSH6-214ENST00000616033 GRAPQ13588 217 aa13.86□□□□□ -0.19
MSH6-214ENST00000616033 SLF2Q8IX21 1173 aa13.86□□□□□ -0.19
MSH6-214ENST00000616033 GRAPLQ8TC17 118 aaPredicted RBP13.86□□□□□ -0.19
MSH6-214ENST00000616033 CERKQ8TCT0 537 aa13.86□□□□□ -0.19
MSH6-214ENST00000616033 SH3TC2Q8TF17 1288 aa13.86□□□□□ -0.19
MSH6-214ENST00000616033 NMUR2Q9GZQ4 415 aa13.86□□□□□ -0.19
MSH6-214ENST00000616033 UNC45AQ9H3U1 944 aa13.86□□□□□ -0.19
MSH6-214ENST00000616033 CLIC5Q9NZA1 410 aa13.86□□□□□ -0.19
MSH6-214ENST00000616033 POLLQ9UGP5 575 aa13.86□□□□□ -0.19
MSH6-214ENST00000616033 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.86□□□□□ -0.19
MSH6-214ENST00000616033 KIAA1551Q9HCM1 1747 aa13.86□□□□□ -0.19
MSH6-214ENST00000616033 ATP2A1O14983 1001 aa13.86□□□□□ -0.19
MSH6-214ENST00000616033 TLR3O15455 904 aaKnown RBP13.86□□□□□ -0.19
MSH6-214ENST00000616033 PGM3O95394 542 aa13.86□□□□□ -0.19
MSH6-214ENST00000616033 HNRNPCP07910 306 aaKnown RBP eCLIP13.86□□□□□ -0.19
MSH6-214ENST00000616033 BASP1P80723 227 aaKnown RBP13.86□□□□□ -0.19
MSH6-214ENST00000616033 PLA2G4FQ68DD2 849 aa13.86□□□□□ -0.19
MSH6-214ENST00000616033 ACAD10Q6JQN1 1059 aa13.86□□□□□ -0.19
MSH6-214ENST00000616033 HAUS6Q7Z4H7 955 aa13.86□□□□□ -0.19
MSH6-214ENST00000616033 POU5F2Q8N7G0 328 aa13.86□□□□□ -0.19
MSH6-214ENST00000616033 NACC1Q96RE7 527 aa13.86□□□□□ -0.19
MSH6-214ENST00000616033 BLOC1S6Q9UL45 172 aa13.86□□□□□ -0.19
MSH6-214ENST00000616033 CNTNAP4Q9C0A0 1308 aa13.85□□□□□ -0.19
MSH6-214ENST00000616033 EIF3DO15371 548 aaKnown RBP eCLIP13.85□□□□□ -0.19
MSH6-214ENST00000616033 LPXNO60711 386 aa13.85□□□□□ -0.19
MSH6-214ENST00000616033 FDX1P10109 184 aa13.85□□□□□ -0.19
MSH6-214ENST00000616033 GCLCP48506 637 aaPredicted RBP13.85□□□□□ -0.19
MSH6-214ENST00000616033 ATXN3P54252 364 aaPredicted RBP13.85□□□□□ -0.19
MSH6-214ENST00000616033 KCNT1Q5JUK3 1230 aa13.85□□□□□ -0.19
MSH6-214ENST00000616033 RGS9BPQ6ZS82 235 aa13.85□□□□□ -0.19
MSH6-214ENST00000616033 FNBP1Q96RU3 617 aa13.85□□□□□ -0.19
MSH6-214ENST00000616033 NDNQ99608 321 aa13.85□□□□□ -0.19
MSH6-214ENST00000616033 ZNF184Q99676 751 aaPredicted RBP13.85□□□□□ -0.19
MSH6-214ENST00000616033 HSD17B14Q9BPX1 270 aa13.85□□□□□ -0.19
MSH6-214ENST00000616033 MAGEA13PA6NCF6 341 aa13.85□□□□□ -0.19
MSH6-214ENST00000616033 PIK3CDO00329 1044 aa13.85□□□□□ -0.19
MSH6-214ENST00000616033 FCHO1O14526 889 aa13.85□□□□□ -0.19
MSH6-214ENST00000616033 MT-ND3P03897 115 aa13.85□□□□□ -0.19
MSH6-214ENST00000616033 TNNI1P19237 187 aa13.85□□□□□ -0.19
MSH6-214ENST00000616033 PAX3P23760 479 aa13.85□□□□□ -0.19
MSH6-214ENST00000616033 CCNG1P51959 295 aa13.85□□□□□ -0.19
MSH6-214ENST00000616033 ARL4CP56559 192 aa13.85□□□□□ -0.19
MSH6-214ENST00000616033 YWHAGP61981 247 aaKnown RBP eCLIP13.85□□□□□ -0.19
MSH6-214ENST00000616033 BTKQ06187 659 aa13.85□□□□□ -0.19
MSH6-214ENST00000616033 ARID3BQ8IVW6 561 aaPredicted RBP13.85□□□□□ -0.19
MSH6-214ENST00000616033 SYNCQ9H7C4 482 aa13.85□□□□□ -0.19
MSH6-214ENST00000616033 ZWILCHQ9H900 591 aa13.85□□□□□ -0.19
MSH6-214ENST00000616033 MROH7Q68CQ1 1323 aa13.85□□□□□ -0.19
MSH6-214ENST00000616033 FAM155BO75949 473 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 NDUFB10O96000 172 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 SPATA31D3P0C874 917 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 RTP1P59025 263 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 RPL7AP62424 266 aaKnown RBP13.84□□□□□ -0.19
MSH6-214ENST00000616033 CCDC15Q0P6D6 951 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 SNRNP35Q16560 246 aaKnown RBP13.84□□□□□ -0.19
MSH6-214ENST00000616033 MFSD7Q6UXD7 560 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 SPATA31D4Q6ZUB0 917 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 MIER3Q7Z3K6 550 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 FAM71AQ8IYT1 594 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 DAW1Q8N136 415 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 DDX27Q96GQ7 796 aaKnown RBP13.84□□□□□ -0.19
MSH6-214ENST00000616033 PHF12Q96QT6 1004 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 FIZ1Q96SL8 496 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms