RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 B4GALNT2Q8NHY0 566 aa18.19■□□□□ 0.5
HMGXB3-206ENST00000613459 MCEEQ96PE7 176 aa18.19■□□□□ 0.5
HMGXB3-206ENST00000613459 SCN3BQ9NY72 215 aa18.19■□□□□ 0.5
HMGXB3-206ENST00000613459 ZC3H4Q9UPT8 1303 aaKnown RBP18.18■□□□□ 0.5
HMGXB3-206ENST00000613459 MAGEA13PA6NCF6 341 aa18.18■□□□□ 0.5
HMGXB3-206ENST00000613459 CLASP2O75122 1294 aaKnown RBP18.18■□□□□ 0.5
HMGXB3-206ENST00000613459 SERPINB3P29508 390 aa18.18■□□□□ 0.5
HMGXB3-206ENST00000613459 KYNUQ16719 465 aa18.18■□□□□ 0.5
HMGXB3-206ENST00000613459 OLFML2BQ68BL8 750 aa18.18■□□□□ 0.5
HMGXB3-206ENST00000613459 AGR3Q8TD06 166 aa18.18■□□□□ 0.5
HMGXB3-206ENST00000613459 RGL1Q9NZL6 768 aa18.18■□□□□ 0.5
HMGXB3-206ENST00000613459 MYMKA6NI61 221 aa18.18■□□□□ 0.5
HMGXB3-206ENST00000613459 SLC25A27O95847 323 aa18.18■□□□□ 0.5
HMGXB3-206ENST00000613459 ILF2Q12905 390 aaKnown RBP18.18■□□□□ 0.5
HMGXB3-206ENST00000613459 CENPPQ6IPU0 288 aa18.18■□□□□ 0.5
HMGXB3-206ENST00000613459 CCT7Q99832 543 aa18.18■□□□□ 0.5
HMGXB3-206ENST00000613459 PRR23D1E9PI22 279 aaPredicted RBP18.18■□□□□ 0.5
HMGXB3-206ENST00000613459 PRR23D2P0DMB1 279 aaPredicted RBP18.18■□□□□ 0.5
HMGXB3-206ENST00000613459 RUNX1T1Q06455 604 aa18.18■□□□□ 0.5
HMGXB3-206ENST00000613459 IER5Q5VY09 327 aa18.18■□□□□ 0.5
HMGXB3-206ENST00000613459 STKLD1Q8NE28 680 aa18.18■□□□□ 0.5
HMGXB3-206ENST00000613459 GOLPH3Q9H4A6 298 aa18.18■□□□□ 0.5
HMGXB3-206ENST00000613459 DBR1Q9UK59 544 aaKnown RBP18.18■□□□□ 0.5
HMGXB3-206ENST00000613459 STIP1P31948 543 aaKnown RBP18.18■□□□□ 0.5
HMGXB3-206ENST00000613459 VPS37AQ8NEZ2 397 aa18.18■□□□□ 0.5
HMGXB3-206ENST00000613459 PHF21AQ96BD5 680 aa18.18■□□□□ 0.5
HMGXB3-206ENST00000613459 RBM12Q9NTZ6 932 aaKnown RBP18.18■□□□□ 0.5
HMGXB3-206ENST00000613459 KCNH4Q9UQ05 1017 aa18.18■□□□□ 0.5
HMGXB3-206ENST00000613459 DAGLAQ9Y4D2 1042 aa18.18■□□□□ 0.5
HMGXB3-206ENST00000613459 SETBP1Q9Y6X0 1596 aa18.18■□□□□ 0.5
HMGXB3-206ENST00000613459 FAM196BA6NMK8 535 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 ENO4A6NNW6 628 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 ENO3P13929 434 aaPredicted RBP18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 ST8SIA6P61647 398 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 ADRM1Q16186 407 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 DEPDC1Q5TB30 811 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 KLHDC7AQ5VTJ3 777 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 SAMD3Q8N6K7 520 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 GTF3C4Q9UKN8 822 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 SNX9Q9Y5X1 595 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 IQCA1LA6NCM1 817 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 RAD51CO43502 376 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 GEMIN4P57678 1058 aaKnown RBP18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 ITIH4Q14624 930 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 TRIP10Q15642 601 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 BOLA3Q53S33 107 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 FEZF2Q8TBJ5 459 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 CPA5Q8WXQ8 436 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 ZFYVE19Q96K21 471 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 THTPAQ9BU02 230 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 GOLGA8RI6L899 631 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 GSNP06396 782 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 SERPINB1P30740 379 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 FXR1P51114 621 aaKnown RBP eCLIP18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 KCNK10P57789 538 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 CDR2LQ86X02 465 aaPredicted RBP18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 SHCBP1Q8NEM2 672 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 E2F7Q96AV8 911 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 CNBD2Q96M20 576 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 TSC22D4Q9Y3Q8 395 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 HLA-DRAP01903 254 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 COMTP21964 271 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 TJAP1Q5JTD0 557 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 DDI1Q8WTU0 396 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 ANKS1AQ92625 1134 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 ZIM3Q96PE6 472 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 PRPF18Q99633 342 aaKnown RBP18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 MANSC1Q9H8J5 431 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 PCMTD2Q9NV79 361 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 H2AFXP16104 143 aaPredicted RBP18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 DSG1Q02413 1049 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 UGT3A1Q6NUS8 523 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 KDM7AQ6ZMT4 941 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 APBB2Q92870 758 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 CCDC126Q96EE4 140 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 MXRA8Q9BRK3 442 aa18.17■□□□□ 0.5
HMGXB3-206ENST00000613459 ALKQ9UM73 1620 aa18.16■□□□□ 0.5
HMGXB3-206ENST00000613459 TMEM120BA0PK00 339 aa18.16■□□□□ 0.5
HMGXB3-206ENST00000613459 E7ENQ6 273 aa18.16■□□□□ 0.5
HMGXB3-206ENST00000613459 IGF2BP3O00425 579 aaKnown RBP eCLIP18.16■□□□□ 0.5
HMGXB3-206ENST00000613459 ZNF263O14978 683 aa18.16■□□□□ 0.5
HMGXB3-206ENST00000613459 COILP38432 576 aaPredicted RBP18.16■□□□□ 0.5
HMGXB3-206ENST00000613459 VCPP55072 806 aaKnown RBP18.16■□□□□ 0.5
HMGXB3-206ENST00000613459 NPEPPSP55786 919 aa18.16■□□□□ 0.5
HMGXB3-206ENST00000613459 SKOR1P84550 965 aa18.16■□□□□ 0.5
HMGXB3-206ENST00000613459 FAM9CQ8IZT9 166 aa18.16■□□□□ 0.5
HMGXB3-206ENST00000613459 CHST13Q8NET6 341 aa18.16■□□□□ 0.5
HMGXB3-206ENST00000613459 USP13Q92995 863 aaPredicted RBP18.16■□□□□ 0.5
HMGXB3-206ENST00000613459 TADA1Q96BN2 335 aa18.16■□□□□ 0.5
HMGXB3-206ENST00000613459 CNPY3Q9BT09 278 aa18.16■□□□□ 0.5
HMGXB3-206ENST00000613459 NDEL1Q9GZM8 345 aa18.16■□□□□ 0.5
HMGXB3-206ENST00000613459 NDUFA13Q9P0J0 144 aa18.16■□□□□ 0.5
HMGXB3-206ENST00000613459 NPHP3-ACAD11A0A0J9YXS1 232 aa18.16■□□□□ 0.5
HMGXB3-206ENST00000613459 ANXA9O76027 345 aa18.16■□□□□ 0.5
HMGXB3-206ENST00000613459 NDUFB10O96000 172 aa18.16■□□□□ 0.5
HMGXB3-206ENST00000613459 PRLRP16471 622 aa18.16■□□□□ 0.5
HMGXB3-206ENST00000613459 IRAK1P51617 712 aa18.16■□□□□ 0.5
HMGXB3-206ENST00000613459 KPNB1Q14974 876 aaKnown RBP18.16■□□□□ 0.5
HMGXB3-206ENST00000613459 SPATA16Q9BXB7 569 aa18.16■□□□□ 0.5
HMGXB3-206ENST00000613459 ADCY3O60266 1144 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms