RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 DNAJB4Q9UDY4 337 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 S100A6P06703 90 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 KRT19P08727 400 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 LINGO3P0C6S8 592 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 SLC5A1P13866 664 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 F8A1P23610 371 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 PACSIN1Q9BY11 444 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 WHRNQ9P202 907 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 PHTF1Q9UMS5 762 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 TBX22Q9Y458 520 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 LRRIQ4A6NIV6 560 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 SNAP23O00161 211 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 CDC42EP1Q00587 391 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 KIAA1683Q9H0B3 1180 aa5.17□□□□□ -1.58
VPS13D-213ENST00000613099 COBLO75128 1261 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 DLG3Q92796 817 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 PLEKHA8Q96JA3 519 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 LINC00854A0A1B0GVQ3 168 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 POLR2MP0CAP2 368 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 NCALDP61601 193 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.16□□□□□ -1.58
VPS13D-213ENST00000613099 CTC1Q2NKJ3 1217 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 METTL24Q5JXM2 366 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 DCLK2Q8N568 766 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 ACTRT1Q8TDG2 376 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 FAM149B1Q96BN6 582 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 MS4A14Q96JA4 679 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 BIRC8Q96P09 236 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 OR2B2Q9GZK3 357 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 PLEKHA5Q9HAU0 1116 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 A0A1W2PQJ5 194 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 MINDY4BA8MYZ0 360 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 NPTX2P47972 431 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 SYMPKQ92797 1274 aaKnown RBP5.16□□□□□ -1.58
VPS13D-213ENST00000613099 DNAJC7Q99615 494 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 EHD4Q9H223 541 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 ALBP02768 609 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 CCT8P50990 548 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 CLPPQ16740 277 aaPredicted RBP5.16□□□□□ -1.58
VPS13D-213ENST00000613099 DUS1LQ6P1R4 473 aaKnown RBP5.16□□□□□ -1.58
VPS13D-213ENST00000613099 OR8H2Q8N162 312 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 USP38Q8NB14 1042 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 SLC8A2Q9UPR5 921 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 RGS5O15539 181 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 TNFRSF21O75509 655 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 MYCP01106 439 aaPredicted RBP5.16□□□□□ -1.58
VPS13D-213ENST00000613099 PABPC4LP0CB38 370 aaKnown RBP5.16□□□□□ -1.58
VPS13D-213ENST00000613099 ANPEPP15144 967 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 RCVRNP35243 200 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 NAMPTP43490 491 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 EDRF1Q3B7T1 1238 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 CAMK1DQ8IU85 385 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 HPS3Q969F9 1004 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 ARHGEF3Q9NR81 526 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 ASAP1Q9ULH1 1129 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 KNDC1Q76NI1 1749 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 PIK3R2O00459 728 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 PAEPP09466 180 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 ETS2P15036 469 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 SH3D19Q5HYK7 790 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 ODR4Q5SWX8 454 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 FAM122CQ6P4D5 195 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 TLDC1Q6P9B6 456 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 CYFIP1Q7L576 1253 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 TTC17Q96AE7 1141 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 BBS2Q9BXC9 721 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 CYP4F11Q9HBI6 524 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 TTLL3Q9Y4R7 772 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 CRB1P82279 1406 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 TEX51A0A1B0GUA7 166 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 ENTPD5O75356 428 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 FGAP02671 866 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 RARGP13631 454 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 ALOX12P18054 663 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 EPHB2P29323 1055 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 HNRNPFP52597 415 aaKnown RBP5.16□□□□□ -1.58
VPS13D-213ENST00000613099 TAGLNQ01995 201 aaKnown RBP5.16□□□□□ -1.58
VPS13D-213ENST00000613099 PTK2Q05397 1052 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 KRT24Q2M2I5 525 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 GARNL3Q5VVW2 1013 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 ZNF662Q6ZS27 426 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 OR6Y1Q8NGX8 325 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 PHF20Q9BVI0 1012 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 FBXO40Q9UH90 709 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 AMPD2Q01433 879 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 IFIT5Q13325 482 aaKnown RBP5.16□□□□□ -1.58
VPS13D-213ENST00000613099 RAB26Q9ULW5 256 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 AURKCQ9UQB9 309 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 N6AMT1Q9Y5N5 214 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 BTBD19C9JJ37 291 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 PRDM1O75626 825 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 SEC24DO94855 1032 aaPredicted RBP5.16□□□□□ -1.58
VPS13D-213ENST00000613099 HSPA4LO95757 839 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 ABCB4P21439 1286 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 RTP1P59025 263 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 MOGQ16653 247 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 MZT2BQ6NZ67 158 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 MAEAQ7L5Y9 396 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 PIK3C3Q8NEB9 887 aa5.16□□□□□ -1.58
VPS13D-213ENST00000613099 FBXL13Q8NEE6 735 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms