RNA–Protein interactions for RNA: ENST00000611795.1

SCFD2-204, Transcript of sec1 family domain containing 2, humanhuman

TSL 5 BASIC

Gene SCFD2, Length 1,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-204ENST00000611795 CARNS1A5YM72 827 aa20.3■□□□□ 0.84
SCFD2-204ENST00000611795 SYN3O14994 580 aa20.3■□□□□ 0.84
SCFD2-204ENST00000611795 TRAPPC3O43617 180 aa20.3■□□□□ 0.84
SCFD2-204ENST00000611795 FGF18O76093 207 aa20.3■□□□□ 0.84
SCFD2-204ENST00000611795 CALCAP01258 141 aa20.3■□□□□ 0.84
SCFD2-204ENST00000611795 LMO2P25791 158 aa20.3■□□□□ 0.84
SCFD2-204ENST00000611795 KRT9P35527 623 aa20.3■□□□□ 0.84
SCFD2-204ENST00000611795 SOX5P35711 763 aa20.3■□□□□ 0.84
SCFD2-204ENST00000611795 PPM1AP35813 382 aa20.3■□□□□ 0.84
SCFD2-204ENST00000611795 PLCB3Q01970 1234 aa20.3■□□□□ 0.84
SCFD2-204ENST00000611795 ORC1Q13415 861 aa20.3■□□□□ 0.84
SCFD2-204ENST00000611795 RTP2Q5QGT7 225 aa20.3■□□□□ 0.84
SCFD2-204ENST00000611795 KIAA0319Q5VV43 1072 aa20.3■□□□□ 0.84
SCFD2-204ENST00000611795 DDX53Q86TM3 631 aaKnown RBP20.3■□□□□ 0.84
SCFD2-204ENST00000611795 TMEM169Q96HH4 297 aa20.3■□□□□ 0.84
SCFD2-204ENST00000611795 SPAG5Q96R06 1193 aa20.3■□□□□ 0.84
SCFD2-204ENST00000611795 HERC2P3Q9BVR0 1158 aa20.3■□□□□ 0.84
SCFD2-204ENST00000611795 IMPACTQ9P2X3 320 aa20.3■□□□□ 0.84
SCFD2-204ENST00000611795 MYO6Q9UM54 1294 aa20.3■□□□□ 0.84
SCFD2-204ENST00000611795 BARX2Q9UMQ3 279 aaPredicted RBP20.3■□□□□ 0.84
SCFD2-204ENST00000611795 LUC7L2Q9Y383 392 aaKnown RBP20.3■□□□□ 0.84
SCFD2-204ENST00000611795 PCDHB4Q9Y5E5 795 aa20.3■□□□□ 0.84
SCFD2-204ENST00000611795 RANBP2P49792 3224 aaKnown RBP20.3■□□□□ 0.84
SCFD2-204ENST00000611795 C5orf67F2Z3F1 127 aa20.29■□□□□ 0.84
SCFD2-204ENST00000611795 CLCN1P35523 988 aa20.29■□□□□ 0.84
SCFD2-204ENST00000611795 NDST1P52848 882 aa20.29■□□□□ 0.84
SCFD2-204ENST00000611795 RAD23BP54727 409 aa20.29■□□□□ 0.84
SCFD2-204ENST00000611795 ERVK-21P61565 698 aa20.29■□□□□ 0.84
SCFD2-204ENST00000611795 ELAVL2Q12926 359 aaKnown RBP20.29■□□□□ 0.84
SCFD2-204ENST00000611795 MRPL58Q14197 206 aaKnown RBP20.29■□□□□ 0.84
SCFD2-204ENST00000611795 RAB30Q15771 203 aa20.29■□□□□ 0.84
SCFD2-204ENST00000611795 TMEM270Q6UE05 265 aa20.29■□□□□ 0.84
SCFD2-204ENST00000611795 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.29■□□□□ 0.84
SCFD2-204ENST00000611795 TMEM86AQ8N2M4 240 aa20.29■□□□□ 0.84
SCFD2-204ENST00000611795 RBBP8NLQ8NC74 664 aaPredicted RBP20.29■□□□□ 0.84
SCFD2-204ENST00000611795 DNAJC7Q99615 494 aa20.29■□□□□ 0.84
SCFD2-204ENST00000611795 FAM124BQ9H5Z6 455 aaPredicted RBP20.29■□□□□ 0.84
SCFD2-204ENST00000611795 ACP6Q9NPH0 428 aa20.29■□□□□ 0.84
SCFD2-204ENST00000611795 CHST7Q9NS84 486 aa20.29■□□□□ 0.84
SCFD2-204ENST00000611795 STXBP5LQ9Y2K9 1186 aa20.29■□□□□ 0.84
SCFD2-204ENST00000611795 LAMA2P24043 3122 aaKnown RBP20.29■□□□□ 0.84
SCFD2-204ENST00000611795 AKR1B15C9JRZ8 316 aaPredicted RBP20.28■□□□□ 0.84
SCFD2-204ENST00000611795 CYP26A1O43174 497 aa20.28■□□□□ 0.84
SCFD2-204ENST00000611795 GFPT2O94808 682 aa20.28■□□□□ 0.84
SCFD2-204ENST00000611795 OAZ2O95190 189 aa20.28■□□□□ 0.84
SCFD2-204ENST00000611795 SOD2P04179 222 aa20.28■□□□□ 0.84
SCFD2-204ENST00000611795 KRT5P13647 590 aa20.28■□□□□ 0.84
SCFD2-204ENST00000611795 STAT1P42224 750 aa20.28■□□□□ 0.84
SCFD2-204ENST00000611795 YWHAEP62258 255 aaKnown RBP20.28■□□□□ 0.84
SCFD2-204ENST00000611795 ZNF394Q53GI3 561 aa20.28■□□□□ 0.84
SCFD2-204ENST00000611795 VARS2Q5ST30 1063 aaKnown RBP20.28■□□□□ 0.84
SCFD2-204ENST00000611795 SLC4A11Q8NBS3 891 aa20.28■□□□□ 0.84
SCFD2-204ENST00000611795 OR6B3Q8NGW1 331 aa20.28■□□□□ 0.84
SCFD2-204ENST00000611795 SPATA18Q8TC71 538 aa20.28■□□□□ 0.84
SCFD2-204ENST00000611795 ANP32BQ92688 251 aaKnown RBP20.28■□□□□ 0.84
SCFD2-204ENST00000611795 TGS1Q96RS0 853 aaKnown RBP20.28■□□□□ 0.84
SCFD2-204ENST00000611795 LPIN3Q9BQK8 851 aa20.28■□□□□ 0.84
SCFD2-204ENST00000611795 PLVAPQ9BX97 442 aa20.28■□□□□ 0.84
SCFD2-204ENST00000611795 DPEP3Q9H4B8 488 aa20.28■□□□□ 0.84
SCFD2-204ENST00000611795 AIPL1Q9NZN9 384 aa20.28■□□□□ 0.84
SCFD2-204ENST00000611795 MSRAQ9UJ68 235 aa20.28■□□□□ 0.84
SCFD2-204ENST00000611795 DSEQ9UL01 958 aa20.28■□□□□ 0.84
SCFD2-204ENST00000611795 MTUS1Q9ULD2 1270 aa20.28■□□□□ 0.84
SCFD2-204ENST00000611795 COLQQ9Y215 455 aaPredicted RBP20.28■□□□□ 0.84
SCFD2-204ENST00000611795 RWDD3Q9Y3V2 267 aa20.28■□□□□ 0.84
SCFD2-204ENST00000611795 PDGFRBP09619 1106 aa20.27■□□□□ 0.84
SCFD2-204ENST00000611795 ACAT1P24752 427 aaKnown RBP20.27■□□□□ 0.84
SCFD2-204ENST00000611795 GNL1P36915 607 aaPredicted RBP20.27■□□□□ 0.84
SCFD2-204ENST00000611795 USP8P40818 1118 aa20.27■□□□□ 0.84
SCFD2-204ENST00000611795 SMAD3P84022 425 aaKnown RBP20.27■□□□□ 0.84
SCFD2-204ENST00000611795 CCDC142Q17RM4 750 aa20.27■□□□□ 0.84
SCFD2-204ENST00000611795 OVOS1Q6IE37 1185 aa20.27■□□□□ 0.84
SCFD2-204ENST00000611795 WDR59Q6PJI9 974 aa20.27■□□□□ 0.84
SCFD2-204ENST00000611795 IRF2BP2Q7Z5L9 587 aa20.27■□□□□ 0.84
SCFD2-204ENST00000611795 UNC93AQ86WB7 457 aa20.27■□□□□ 0.84
SCFD2-204ENST00000611795 CEP57Q86XR8 500 aa20.27■□□□□ 0.84
SCFD2-204ENST00000611795 OR10T2Q8NGX3 314 aa20.27■□□□□ 0.84
SCFD2-204ENST00000611795 PPP1R9BQ96SB3 815 aa20.27■□□□□ 0.84
SCFD2-204ENST00000611795 TTPALQ9BTX7 342 aa20.27■□□□□ 0.84
SCFD2-204ENST00000611795 SNX25Q9H3E2 840 aa20.27■□□□□ 0.84
SCFD2-204ENST00000611795 ABHD10Q9NUJ1 306 aa20.27■□□□□ 0.84
SCFD2-204ENST00000611795 DDX43Q9NXZ2 648 aaKnown RBP20.27■□□□□ 0.84
SCFD2-204ENST00000611795 CHD9Q3L8U1 2897 aa20.27■□□□□ 0.83
SCFD2-204ENST00000611795 ARHGEF37A1IGU5 675 aa20.27■□□□□ 0.83
SCFD2-204ENST00000611795 A8MXQ7 604 aa20.27■□□□□ 0.83
SCFD2-204ENST00000611795 TBC1D4O60343 1298 aa20.27■□□□□ 0.83
SCFD2-204ENST00000611795 ATP2C2O75185 946 aa20.27■□□□□ 0.83
SCFD2-204ENST00000611795 TPM1P09493 284 aa20.27■□□□□ 0.83
SCFD2-204ENST00000611795 DNAJB1P25685 340 aa20.27■□□□□ 0.83
SCFD2-204ENST00000611795 DNAJB2P25686 324 aa20.27■□□□□ 0.83
SCFD2-204ENST00000611795 HNRNPH3P31942 346 aaKnown RBP20.27■□□□□ 0.83
SCFD2-204ENST00000611795 LHX1P48742 406 aa20.27■□□□□ 0.83
SCFD2-204ENST00000611795 YWHAHQ04917 246 aaPredicted RBP20.27■□□□□ 0.83
SCFD2-204ENST00000611795 USP41Q3LFD5 358 aa20.27■□□□□ 0.83
SCFD2-204ENST00000611795 SFMBT2Q5VUG0 894 aa20.27■□□□□ 0.83
SCFD2-204ENST00000611795 SMYD5Q6GMV2 418 aa20.27■□□□□ 0.83
SCFD2-204ENST00000611795 PRSS55Q6UWB4 352 aaPredicted RBP20.27■□□□□ 0.83
SCFD2-204ENST00000611795 RSPO2Q6UXX9 243 aaPredicted RBP20.27■□□□□ 0.83
SCFD2-204ENST00000611795 CCDC186Q7Z3E2 898 aa20.27■□□□□ 0.83
SCFD2-204ENST00000611795 METTL23Q86XA0 190 aa20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms