RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 BARX2Q9UMQ3 279 aaPredicted RBP17.07■□□□□ 0.32
CLTCL1-207ENST00000611723 PCDHB8Q9UN66 801 aa17.07■□□□□ 0.32
CLTCL1-207ENST00000611723 L1RE1Q9UN81 338 aa17.07■□□□□ 0.32
CLTCL1-207ENST00000611723 PCDHB4Q9Y5E5 795 aa17.07■□□□□ 0.32
CLTCL1-207ENST00000611723 F8W810 466 aa17.06■□□□□ 0.32
CLTCL1-207ENST00000611723 GABRDO14764 452 aa17.06■□□□□ 0.32
CLTCL1-207ENST00000611723 CILPO75339 1184 aa17.06■□□□□ 0.32
CLTCL1-207ENST00000611723 CLSTN1O94985 981 aa17.06■□□□□ 0.32
CLTCL1-207ENST00000611723 PRKCIP41743 596 aa17.06■□□□□ 0.32
CLTCL1-207ENST00000611723 BRCC3P46736 316 aa17.06■□□□□ 0.32
CLTCL1-207ENST00000611723 ELAVL2Q12926 359 aaKnown RBP17.06■□□□□ 0.32
CLTCL1-207ENST00000611723 WDR59Q6PJI9 974 aa17.06■□□□□ 0.32
CLTCL1-207ENST00000611723 SCARA5Q6ZMJ2 495 aa17.06■□□□□ 0.32
CLTCL1-207ENST00000611723 SLC39A11Q8N1S5 342 aa17.06■□□□□ 0.32
CLTCL1-207ENST00000611723 PDCL2Q8N4E4 241 aa17.06■□□□□ 0.32
CLTCL1-207ENST00000611723 COLGALT1Q8NBJ5 622 aa17.06■□□□□ 0.32
CLTCL1-207ENST00000611723 WHAMMQ8TF30 809 aa17.06■□□□□ 0.32
CLTCL1-207ENST00000611723 KBTBD7Q8WVZ9 684 aa17.06■□□□□ 0.32
CLTCL1-207ENST00000611723 IGSF21Q96ID5 467 aa17.06■□□□□ 0.32
CLTCL1-207ENST00000611723 MRPL45Q9BRJ2 306 aaKnown RBP17.06■□□□□ 0.32
CLTCL1-207ENST00000611723 AAASQ9NRG9 546 aa17.06■□□□□ 0.32
CLTCL1-207ENST00000611723 SYN3O14994 580 aa17.05■□□□□ 0.32
CLTCL1-207ENST00000611723 ODC1P11926 461 aa17.05■□□□□ 0.32
CLTCL1-207ENST00000611723 CLCN1P35523 988 aa17.05■□□□□ 0.32
CLTCL1-207ENST00000611723 GNL1P36915 607 aaPredicted RBP17.05■□□□□ 0.32
CLTCL1-207ENST00000611723 RAP1GAPP47736 663 aa17.05■□□□□ 0.32
CLTCL1-207ENST00000611723 LHX1P48742 406 aa17.05■□□□□ 0.32
CLTCL1-207ENST00000611723 BPIFB4P59827 614 aa17.05■□□□□ 0.32
CLTCL1-207ENST00000611723 SPOUT1Q5T280 376 aaKnown RBP17.05■□□□□ 0.32
CLTCL1-207ENST00000611723 WSCD1Q658N2 575 aa17.05■□□□□ 0.32
CLTCL1-207ENST00000611723 E4F1Q66K89 784 aaPredicted RBP17.05■□□□□ 0.32
CLTCL1-207ENST00000611723 TMEM270Q6UE05 265 aa17.05■□□□□ 0.32
CLTCL1-207ENST00000611723 LRRC8AQ8IWT6 810 aa17.05■□□□□ 0.32
CLTCL1-207ENST00000611723 RNF168Q8IYW5 571 aaPredicted RBP17.05■□□□□ 0.32
CLTCL1-207ENST00000611723 ADGRF2Q8IZF7 708 aa17.05■□□□□ 0.32
CLTCL1-207ENST00000611723 HASPINQ8TF76 798 aa17.05■□□□□ 0.32
CLTCL1-207ENST00000611723 ZNHIT6Q9NWK9 470 aaKnown RBP17.05■□□□□ 0.32
CLTCL1-207ENST00000611723 BZW2Q9Y6E2 419 aaKnown RBP17.05■□□□□ 0.32
CLTCL1-207ENST00000611723 SF3B1O75533 1304 aaKnown RBP eCLIP17.04■□□□□ 0.324e-6■■■■■ 174.1
CLTCL1-207ENST00000611723 NT5C1B-RDH14C9J2C7 533 aa17.04■□□□□ 0.32
CLTCL1-207ENST00000611723 CYP26A1O43174 497 aa17.04■□□□□ 0.32
CLTCL1-207ENST00000611723 GFPT2O94808 682 aa17.04■□□□□ 0.32
CLTCL1-207ENST00000611723 SERPING1P05155 500 aa17.04■□□□□ 0.32
CLTCL1-207ENST00000611723 PAEPP09466 180 aa17.04■□□□□ 0.32
CLTCL1-207ENST00000611723 PNMA6AP0CW24 399 aaPredicted RBP17.04■□□□□ 0.32
CLTCL1-207ENST00000611723 FOSL2P15408 326 aa17.04■□□□□ 0.32
CLTCL1-207ENST00000611723 CD58P19256 250 aa17.04■□□□□ 0.32
CLTCL1-207ENST00000611723 ASIC2Q16515 512 aa17.04■□□□□ 0.32
CLTCL1-207ENST00000611723 HGSNATQ68CP4 663 aa17.04■□□□□ 0.32
CLTCL1-207ENST00000611723 FUT10Q6P4F1 479 aa17.04■□□□□ 0.32
CLTCL1-207ENST00000611723 TMEM173Q86WV6 379 aaPredicted RBP17.04■□□□□ 0.32
CLTCL1-207ENST00000611723 CRYBG2Q8N1P7 616 aa17.04■□□□□ 0.32
CLTCL1-207ENST00000611723 RBBP8NLQ8NC74 664 aaPredicted RBP17.04■□□□□ 0.32
CLTCL1-207ENST00000611723 BCL7CQ8WUZ0 217 aaPredicted RBP17.04■□□□□ 0.32
CLTCL1-207ENST00000611723 GPR62Q9BZJ7 368 aa17.04■□□□□ 0.32
CLTCL1-207ENST00000611723 SPG21Q9NZD8 308 aa17.04■□□□□ 0.32
CLTCL1-207ENST00000611723 RAPGEFL1Q9UHV5 662 aa17.04■□□□□ 0.32
CLTCL1-207ENST00000611723 KIAA1257Q9ULG3 409 aa17.04■□□□□ 0.32
CLTCL1-207ENST00000611723 NME7Q9Y5B8 376 aa17.04■□□□□ 0.32
CLTCL1-207ENST00000611723 PCDHB12Q9Y5F1 795 aa17.04■□□□□ 0.32
CLTCL1-207ENST00000611723 PCDHA11Q9Y5I1 949 aa17.04■□□□□ 0.32
CLTCL1-207ENST00000611723 TTC28Q96AY4 2481 aa17.04■□□□□ 0.32
CLTCL1-207ENST00000611723 EYSQ5T1H1 3165 aa17.03■□□□□ 0.32
CLTCL1-207ENST00000611723 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.03■□□□□ 0.32
CLTCL1-207ENST00000611723 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.03■□□□□ 0.32
CLTCL1-207ENST00000611723 LCHNA4D1U4 455 aa17.03■□□□□ 0.32
CLTCL1-207ENST00000611723 I3L4J1 428 aa17.03■□□□□ 0.32
CLTCL1-207ENST00000611723 OAZ2O95190 189 aa17.03■□□□□ 0.32
CLTCL1-207ENST00000611723 PTMAP06454 111 aaKnown RBP17.03■□□□□ 0.32
CLTCL1-207ENST00000611723 KRT5P13647 590 aa17.03■□□□□ 0.32
CLTCL1-207ENST00000611723 FGFR3P22607 806 aa17.03■□□□□ 0.32
CLTCL1-207ENST00000611723 PPM1AP35813 382 aa17.03■□□□□ 0.32
CLTCL1-207ENST00000611723 PBX3P40426 434 aa17.03■□□□□ 0.32
CLTCL1-207ENST00000611723 USP8P40818 1118 aa17.03■□□□□ 0.32
CLTCL1-207ENST00000611723 NDST1P52848 882 aa17.03■□□□□ 0.32
CLTCL1-207ENST00000611723 RABGGTBP53611 331 aa17.03■□□□□ 0.32
CLTCL1-207ENST00000611723 RAD23BP54727 409 aa17.03■□□□□ 0.32
CLTCL1-207ENST00000611723 PLCB3Q01970 1234 aa17.03■□□□□ 0.32
CLTCL1-207ENST00000611723 PTK2Q05397 1052 aa17.03■□□□□ 0.32
CLTCL1-207ENST00000611723 MRPL58Q14197 206 aaKnown RBP17.03■□□□□ 0.32
CLTCL1-207ENST00000611723 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.03■□□□□ 0.32
CLTCL1-207ENST00000611723 OSTM1Q86WC4 334 aa17.03■□□□□ 0.32
CLTCL1-207ENST00000611723 METTL23Q86XA0 190 aa17.03■□□□□ 0.32
CLTCL1-207ENST00000611723 SLC4A11Q8NBS3 891 aa17.03■□□□□ 0.32
CLTCL1-207ENST00000611723 OR6B3Q8NGW1 331 aa17.03■□□□□ 0.32
CLTCL1-207ENST00000611723 TMEM176AQ96HP8 235 aa17.03■□□□□ 0.32
CLTCL1-207ENST00000611723 NT5C1AQ9BXI3 368 aa17.03■□□□□ 0.32
CLTCL1-207ENST00000611723 ELOVL4Q9GZR5 314 aa17.03■□□□□ 0.32
CLTCL1-207ENST00000611723 SNX25Q9H3E2 840 aa17.03■□□□□ 0.32
CLTCL1-207ENST00000611723 STK39Q9UEW8 545 aa17.03■□□□□ 0.32
CLTCL1-207ENST00000611723 RWDD3Q9Y3V2 267 aa17.03■□□□□ 0.32
CLTCL1-207ENST00000611723 VCANP13611 3396 aa17.02■□□□□ 0.32
CLTCL1-207ENST00000611723 SSU72P8A0A1W2PR75 194 aa17.02■□□□□ 0.32
CLTCL1-207ENST00000611723 LINC01553A4QN01 128 aa17.02■□□□□ 0.32
CLTCL1-207ENST00000611723 GRXCR1A8MXD5 290 aa17.02■□□□□ 0.32
CLTCL1-207ENST00000611723 BMPR1AP36894 532 aa17.02■□□□□ 0.32
CLTCL1-207ENST00000611723 SMAD3P84022 425 aaKnown RBP17.02■□□□□ 0.32
CLTCL1-207ENST00000611723 KLHL30Q0D2K2 578 aa17.02■□□□□ 0.32
CLTCL1-207ENST00000611723 MAPK8IP2Q13387 824 aaPredicted RBP17.02■□□□□ 0.32
CLTCL1-207ENST00000611723 FAM171A1Q5VUB5 890 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms