RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 DUSP9Q99956 384 aaKnown RBP14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 AGO4Q9HCK5 861 aaKnown RBP14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 PXMP2Q9NR77 195 aa14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 PSD3Q9NYI0 1048 aa14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 ACADSBP45954 432 aa14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 ALDH18A1P54886 795 aaKnown RBP14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 CXCL9Q07325 125 aa14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 EFTUD2Q15029 972 aaKnown RBP eCLIP14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 C4orf19Q8IY42 314 aa14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 SLC7A14Q8TBB6 771 aa14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 DNAJC5Q9H3Z4 198 aa14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 OLA1Q9NTK5 396 aaKnown RBP14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 L1RE1Q9UN81 338 aa14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 PDHA1P08559 390 aa14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 ITGA4P13612 1032 aa14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 RAD23BP54727 409 aa14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 AP2B1P63010 937 aa14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 NOTUMQ6P988 496 aa14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 TAS2R42Q7RTR8 314 aa14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 ATPAF2Q8N5M1 289 aa14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 TRIML2Q8N7C3 387 aa14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 ATP8B4Q8TF62 1192 aa14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 LRRIQ3A6PVS8 624 aaPredicted RBP14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 GZMAP12544 262 aa14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 GNL1P36915 607 aaPredicted RBP14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 MDM1Q8TC05 714 aa14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 ASIC4Q96FT7 647 aa14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 EGFL8Q99944 293 aa14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 TRPV6Q9H1D0 765 aa14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 PABPC3Q9H361 631 aaKnown RBP14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 NDE1Q9NXR1 346 aa14.93□□□□□ -0.02
PCDHB16-201ENST00000609684 MGEA5O60502 916 aa14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 CUL3Q13618 768 aa14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 ELMOD1Q8N336 334 aa14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 ASAP3Q8TDY4 903 aa14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 SPATS2LQ9NUQ6 558 aaKnown RBP14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 PSTPIP1O43586 416 aa14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 PGK2P07205 417 aa14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 SERPINB9P50453 376 aa14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 STX3Q13277 289 aa14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 IMPG1Q17R60 797 aa14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 MDH1BQ5I0G3 518 aa14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 GLRA4Q5JXX5 417 aa14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 NBPF12Q5TAG4 269 aaPredicted RBP14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 PPIL6Q8IXY8 311 aa14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 SLC26A7Q8TE54 656 aa14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 MTMR8Q96EF0 704 aa14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 RANBP17Q9H2T7 1088 aaKnown RBP14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 BLOC1S4Q9NUP1 217 aa14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 SLC38A7Q9NVC3 462 aa14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 SPAG6O75602 509 aa14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 ENO1P06733 434 aaKnown RBP14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 CETPP11597 493 aa14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 RRM1P23921 792 aa14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 ERFP50548 548 aa14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 PTGISQ16647 500 aa14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 TMEM119Q4V9L6 283 aa14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 TMC2Q8TDI7 906 aa14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 ERP27Q96DN0 273 aa14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 SMAPO00193 183 aa14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 ZC3H11AO75152 810 aaKnown RBP eCLIP14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 PGM1P36871 562 aa14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 SOX10P56693 466 aa14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 VEPH1Q14D04 833 aa14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 PDK1Q15118 436 aa14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 SLC47A2Q86VL8 602 aa14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 PABPC5Q96DU9 382 aaKnown RBP14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 PPP1R36Q96LQ0 422 aa14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 FAM167BQ9BTA0 163 aa14.92□□□□□ -0.02
PCDHB16-201ENST00000609684 GTPBP10A4D1E9 387 aaKnown RBP14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 RRN3P2A6NIE6 340 aa14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 TRIM66O15016 1216 aa14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 ATXN8OSP0DMR3 200 aa14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 PCSK1P29120 753 aa14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 HADHAP40939 763 aa14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 ZNF157P51786 506 aaPredicted RBP14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 CYP24A1Q07973 514 aa14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 FOXD4Q12950 439 aaPredicted RBP14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 ACCSLQ4AC99 568 aa14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 EFHC1Q5JVL4 640 aa14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 DDIASQ8IXT1 998 aa14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 GANCQ8TET4 914 aa14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 FAM163AQ96GL9 167 aaPredicted RBP14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 DPP3Q9NY33 737 aa14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 TADA2AO75478 443 aa14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 FAM107AO95990 144 aa14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 HMBSP08397 361 aa14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 TBX2Q13207 712 aaPredicted RBP14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 BOLA3Q53S33 107 aa14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 MEI1Q5TIA1 1274 aa14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 FBXW10Q5XX13 1052 aa14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 SV2AQ7L0J3 742 aa14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 DEFB132Q7Z7B7 95 aa14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 SAMD3Q8N6K7 520 aa14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 ACTRT1Q8TDG2 376 aa14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 MRPL40Q9NQ50 206 aaKnown RBP14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 AP3B1O00203 1094 aa14.91□□□□□ -0.02
PCDHB16-201ENST00000609684 SNRPAP09012 282 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms