RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 PRSS55Q6UWB4 352 aaPredicted RBP8.22□□□□□ -1.09
MSH6-211ENST00000606499 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.22□□□□□ -1.09
MSH6-211ENST00000606499 GPIHBP1Q8IV16 184 aa8.22□□□□□ -1.09
MSH6-211ENST00000606499 VSTM4Q8IW00 320 aa8.22□□□□□ -1.09
MSH6-211ENST00000606499 VPS52Q8N1B4 723 aa8.22□□□□□ -1.09
MSH6-211ENST00000606499 TOP6BLQ8N6T0 577 aa8.22□□□□□ -1.09
MSH6-211ENST00000606499 UBR7Q8N806 425 aa8.22□□□□□ -1.09
MSH6-211ENST00000606499 SPPL3Q8TCT6 385 aa8.22□□□□□ -1.09
MSH6-211ENST00000606499 POF1BQ8WVV4 589 aa8.22□□□□□ -1.09
MSH6-211ENST00000606499 RIN2Q8WYP3 895 aaPredicted RBP8.22□□□□□ -1.09
MSH6-211ENST00000606499 MRFAP1L1Q96HT8 127 aa8.22□□□□□ -1.09
MSH6-211ENST00000606499 RTP3Q9BQQ7 232 aa8.22□□□□□ -1.09
MSH6-211ENST00000606499 TTPALQ9BTX7 342 aa8.22□□□□□ -1.09
MSH6-211ENST00000606499 NAA15Q9BXJ9 866 aaKnown RBP8.22□□□□□ -1.09
MSH6-211ENST00000606499 ZBP1Q9H171 429 aa8.22□□□□□ -1.09
MSH6-211ENST00000606499 TTYH1Q9H313 450 aaPredicted RBP8.22□□□□□ -1.09
MSH6-211ENST00000606499 NLRC4Q9NPP4 1024 aa8.22□□□□□ -1.09
MSH6-211ENST00000606499 CHST7Q9NS84 486 aa8.22□□□□□ -1.09
MSH6-211ENST00000606499 CISHQ9NSE2 258 aa8.22□□□□□ -1.09
MSH6-211ENST00000606499 DNAJC12Q9UKB3 198 aa8.22□□□□□ -1.09
MSH6-211ENST00000606499 NME7Q9Y5B8 376 aa8.22□□□□□ -1.09
MSH6-211ENST00000606499 C5orf42Q9H799 3197 aa8.22□□□□□ -1.09
MSH6-211ENST00000606499 PTPRDP23468 1912 aa8.21□□□□□ -1.09
MSH6-211ENST00000606499 F8VZ95 297 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 RNF225M0QZC1 329 aaPredicted RBP8.21□□□□□ -1.1
MSH6-211ENST00000606499 SYN3O14994 580 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 TACC1O75410 805 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 CALCAP01258 141 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 GYPCP04921 128 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 URODP06132 367 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 RB1P06400 928 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 RPL17P18621 184 aaKnown RBP8.21□□□□□ -1.1
MSH6-211ENST00000606499 TRIM21P19474 475 aaKnown RBP8.21□□□□□ -1.1
MSH6-211ENST00000606499 TYMPP19971 482 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 RFX1P22670 979 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 WARSP23381 471 aaKnown RBP8.21□□□□□ -1.1
MSH6-211ENST00000606499 LMO2P25791 158 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 CA8P35219 290 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 IRS1P35568 1242 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 CDR1P51861 262 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 NDST1P52848 882 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 MFAP3P55082 362 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 PSMC1P62191 440 aaKnown RBP8.21□□□□□ -1.1
MSH6-211ENST00000606499 YWHAHQ04917 246 aaPredicted RBP8.21□□□□□ -1.1
MSH6-211ENST00000606499 INCA1Q0VD86 236 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 CAMK1Q14012 370 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 PTPN14Q15678 1187 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 PSMD5Q16401 504 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 ZNF394Q53GI3 561 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 KIAA0319Q5VV43 1072 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 PLPP4Q5VZY2 271 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 SPECC1LQ69YQ0 1117 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 KIAA1841Q6NSI8 718 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 RSPO2Q6UXX9 243 aaPredicted RBP8.21□□□□□ -1.1
MSH6-211ENST00000606499 DPH6Q7L8W6 267 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 TMC7Q7Z402 723 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 TMC6Q7Z403 805 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 METTL23Q86XA0 190 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 GLYCTKQ8IVS8 523 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 TMEM86AQ8N2M4 240 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 OR6B3Q8NGW1 331 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 OR10T2Q8NGX3 314 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 LNX1Q8TBB1 728 aaPredicted RBP8.21□□□□□ -1.1
MSH6-211ENST00000606499 PIK3R5Q8WYR1 880 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 TWNKQ96RR1 684 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 TMEM209Q96SK2 561 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 TCF25Q9BQ70 676 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 LPIN3Q9BQK8 851 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 TTYH3Q9C0H2 523 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 GPR88Q9GZN0 384 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 SNX25Q9H3E2 840 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 DPEP3Q9H4B8 488 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 ZNF576Q9H609 170 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 CYP3A43Q9HB55 503 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 ENTPD7Q9NQZ7 604 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 TLR9Q9NR96 1032 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 DDX43Q9NXZ2 648 aaKnown RBP8.21□□□□□ -1.1
MSH6-211ENST00000606499 CEP72Q9P209 647 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 DSEQ9UL01 958 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 LZTS1Q9Y250 596 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 PATJQ8NI35 1801 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 ITIH6Q6UXX5 1313 aa8.21□□□□□ -1.1
MSH6-211ENST00000606499 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.2□□□□□ -1.1
MSH6-211ENST00000606499 ARHGEF37A1IGU5 675 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 HIDE1A8MVS5 230 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 A8MXQ7 604 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 GABRDO14764 452 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 ADAM12O43184 909 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 LPXNO60711 386 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 ATP2C2O75185 946 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 CILPO75339 1184 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 OAZ2O95190 189 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 PDGFRBP09619 1106 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 OR4Q2P0C623 313 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 CTSAP10619 480 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 KRT5P13647 590 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 USP8P40818 1118 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 MRE11P49959 708 aa8.2□□□□□ -1.1
MSH6-211ENST00000606499 FXR1P51114 621 aaKnown RBP eCLIP8.2□□□□□ -1.1
MSH6-211ENST00000606499 JAM2P57087 298 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms