RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 PDCL3Q9H2J4 239 aa13.08□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 RNF39Q9H2S5 420 aa13.08□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 ELAC1Q9H777 363 aaKnown RBP13.08□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 RSAD1Q9HA92 442 aa13.08□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 MRPL47Q9HD33 250 aaKnown RBP13.08□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 STRIP2Q9ULQ0 834 aa13.08□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 POLIQ9UNA4 740 aa13.08□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 PATJQ8NI35 1801 aa13.08□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 SCN5AQ14524 2016 aa13.08□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 FNDC1Q4ZHG4 1894 aaPredicted RBP13.08□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 UQCRHLA0A096LP55 91 aa13.07□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 KPNA7A9QM74 516 aa13.07□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 MIF4GDA9UHW6 222 aaKnown RBP13.07□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 BUB1O43683 1085 aa13.07□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 UQCRHP07919 91 aa13.07□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 WEE2P0C1S8 567 aa13.07□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 SETSIPP0DME0 302 aa13.07□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 CD58P19256 250 aa13.07□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 MMP8P22894 467 aa13.07□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 AARSP49588 968 aaKnown RBP eCLIP13.07□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 C1QTNF8P60827 252 aa13.07□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 CNGA2Q16280 664 aa13.07□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 SCARA5Q6ZMJ2 495 aa13.07□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 AGMOQ6ZNB7 445 aa13.07□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 ECHDC2Q86YB7 292 aa13.07□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 TMEM86AQ8N2M4 240 aa13.07□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 C18orf25Q96B23 403 aaPredicted RBP13.07□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 ZNF653Q96CK0 615 aa13.07□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 ZNF333Q96JL9 665 aa13.07□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 DEFB118Q96PH6 123 aa13.07□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 ADAM2Q99965 735 aa13.07□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 APOL6Q9BWW8 343 aa13.07□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 TLR10Q9BXR5 811 aa13.07□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 SDCBP2Q9H190 292 aa13.07□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 SMYD3Q9H7B4 428 aa13.07□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 ACP6Q9NPH0 428 aa13.07□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 WDR35Q9P2L0 1181 aa13.07□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.07□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 ARL5CA6NH57 179 aa13.06□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 C9IYK1 514 aa13.06□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 MGEA5O60502 916 aa13.06□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 ABCB4P21439 1286 aa13.06□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 WARSP23381 471 aaKnown RBP13.06□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 SNX16P57768 344 aa13.06□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 LILRA4P59901 499 aa13.06□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 SGO2Q562F6 1265 aa13.06□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 GLRA4Q5JXX5 417 aa13.06□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 NAA35Q5VZE5 725 aa13.06□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 ARHGAP17Q68EM7 881 aa13.06□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 SCARA3Q6AZY7 606 aa13.06□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 PLEKHA7Q6IQ23 1121 aa13.06□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 LCLAT1Q6UWP7 414 aa13.06□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 DAAM2Q86T65 1068 aa13.06□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 CRYBG2Q8N1P7 616 aa13.06□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 DNAJC5GQ8N7S2 189 aa13.06□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 ZNF564Q8TBZ8 553 aaPredicted RBP13.06□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 ARHGEF26Q96DR7 871 aa13.06□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 CYFIP2Q96F07 1278 aa13.06□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 HES6Q96HZ4 224 aa13.06□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 PBKQ96KB5 322 aa13.06□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 OSBPL9Q96SU4 736 aa13.06□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 ELOVL4Q9GZR5 314 aa13.06□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 CYLDQ9NQC7 956 aa13.06□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 CTTNBP2NLQ9P2B4 639 aa13.06□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 KANSL3Q9P2N6 904 aa13.06□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 CNOT8Q9UFF9 292 aaKnown RBP13.06□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 STXBP5LQ9Y2K9 1186 aa13.06□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 SNX9Q9Y5X1 595 aa13.06□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 TMCO5BA8MYB1 307 aa13.05□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 O00370 1275 aa13.05□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 BUB1BO60566 1050 aaPredicted RBP13.05□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 HUS1O60921 280 aa13.05□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 TADA3O75528 432 aa13.05□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 KIF4AO95239 1232 aa13.05□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 CXCL10P02778 98 aa13.05□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 MAN1A1P33908 653 aa13.05□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 MLH1P40692 756 aa13.05□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 SLC1A1P43005 524 aa13.05□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 GUCY2FP51841 1108 aa13.05□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 NDST1P52848 882 aa13.05□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 SOX4Q06945 474 aaPredicted RBP13.05□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 PTP4A2Q12974 167 aa13.05□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 TUSC3Q13454 348 aa13.05□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 MBTPS1Q14703 1052 aa13.05□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 MTFR1Q15390 333 aa13.05□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 RPS6KA1Q15418 735 aa13.05□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 PLEKHG4Q58EX7 1191 aa13.05□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 PEX26Q7Z412 305 aa13.05□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 NT5DC3Q86UY8 548 aa13.05□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 APPL2Q8NEU8 664 aa13.05□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 STK32AQ8WU08 396 aa13.05□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 ELMO3Q96BJ8 720 aa13.05□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 TNIP3Q96KP6 325 aa13.05□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 MMS19Q96T76 1030 aa13.05□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 GAD1Q99259 594 aa13.05□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 PARVAQ9NVD7 372 aa13.05□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 TMEM161AQ9NX61 479 aa13.05□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 KLK14Q9P0G3 267 aa13.05□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 ADAM22Q9P0K1 906 aa13.05□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 AMFRQ9UKV5 643 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms