RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 ITIH5Q86UX2 942 aa12.42□□□□□ -0.42
CCDC12-209ENST00000604164 SUGP1Q8IWZ8 645 aaKnown RBP12.42□□□□□ -0.42
CCDC12-209ENST00000604164 GUF1Q8N442 669 aaKnown RBP12.42□□□□□ -0.42
CCDC12-209ENST00000604164 SPPL2BQ8TCT7 592 aa12.42□□□□□ -0.42
CCDC12-209ENST00000604164 CCDC127Q96BQ5 260 aa12.42□□□□□ -0.42
CCDC12-209ENST00000604164 HPDLQ96IR7 371 aa12.42□□□□□ -0.42
CCDC12-209ENST00000604164 GSDMAQ96QA5 445 aa12.42□□□□□ -0.42
CCDC12-209ENST00000604164 MYADMQ96S97 322 aa12.42□□□□□ -0.42
CCDC12-209ENST00000604164 ACBD6Q9BR61 282 aa12.42□□□□□ -0.42
CCDC12-209ENST00000604164 ZCWPW1Q9H0M4 648 aa12.42□□□□□ -0.42
CCDC12-209ENST00000604164 KCTD10Q9H3F6 313 aa12.42□□□□□ -0.42
CCDC12-209ENST00000604164 C11orf16Q9NQ32 467 aa12.42□□□□□ -0.42
CCDC12-209ENST00000604164 ASAH2Q9NR71 780 aa12.42□□□□□ -0.42
CCDC12-209ENST00000604164 DNMT3BQ9UBC3 853 aaKnown RBP12.42□□□□□ -0.42
CCDC12-209ENST00000604164 TRAF3IP3Q9Y228 551 aa12.42□□□□□ -0.42
CCDC12-209ENST00000604164 SNX9Q9Y5X1 595 aa12.42□□□□□ -0.42
CCDC12-209ENST00000604164 BDP1A6H8Y1 2624 aa12.42□□□□□ -0.42
CCDC12-209ENST00000604164 TCHHQ07283 1943 aa12.42□□□□□ -0.42
CCDC12-209ENST00000604164 ANK1P16157 1881 aa12.42□□□□□ -0.42
CCDC12-209ENST00000604164 C2orf16Q68DN1 1984 aa12.41□□□□□ -0.42
CCDC12-209ENST00000604164 MAPK13O15264 365 aa12.41□□□□□ -0.42
CCDC12-209ENST00000604164 PHACTR2O75167 634 aa12.41□□□□□ -0.42
CCDC12-209ENST00000604164 ASGR2P07307 311 aa12.41□□□□□ -0.42
CCDC12-209ENST00000604164 FAM163BP0C2L3 166 aa12.41□□□□□ -0.42
CCDC12-209ENST00000604164 PRR29P0C7W0 189 aa12.41□□□□□ -0.42
CCDC12-209ENST00000604164 COL9A1P20849 921 aa12.41□□□□□ -0.42
CCDC12-209ENST00000604164 ATICP31939 592 aa12.41□□□□□ -0.42
CCDC12-209ENST00000604164 WNT7BP56706 349 aa12.41□□□□□ -0.42
CCDC12-209ENST00000604164 DUSP4Q13115 394 aa12.41□□□□□ -0.42
CCDC12-209ENST00000604164 NFIL3Q16649 462 aa12.41□□□□□ -0.42
CCDC12-209ENST00000604164 SLC39A12Q504Y0 691 aa12.41□□□□□ -0.42
CCDC12-209ENST00000604164 CENPPQ6IPU0 288 aa12.41□□□□□ -0.42
CCDC12-209ENST00000604164 TRAPPC11Q7Z392 1133 aa12.41□□□□□ -0.42
CCDC12-209ENST00000604164 ELOA2Q8IYF1 753 aaPredicted RBP12.41□□□□□ -0.42
CCDC12-209ENST00000604164 TMEM130Q8N3G9 435 aa12.41□□□□□ -0.42
CCDC12-209ENST00000604164 PDCL2Q8N4E4 241 aa12.41□□□□□ -0.42
CCDC12-209ENST00000604164 OR5B17Q8NGF7 314 aa12.41□□□□□ -0.42
CCDC12-209ENST00000604164 FGF13Q92913 245 aa12.41□□□□□ -0.42
CCDC12-209ENST00000604164 SYAP1Q96A49 352 aaPredicted RBP12.41□□□□□ -0.42
CCDC12-209ENST00000604164 PBXIP1Q96AQ6 731 aa12.41□□□□□ -0.42
CCDC12-209ENST00000604164 BORCS6Q96GS4 357 aa12.41□□□□□ -0.42
CCDC12-209ENST00000604164 PGLYRP2Q96PD5 576 aa12.41□□□□□ -0.42
CCDC12-209ENST00000604164 CORO1BQ9BR76 489 aa12.41□□□□□ -0.42
CCDC12-209ENST00000604164 GPR88Q9GZN0 384 aa12.41□□□□□ -0.42
CCDC12-209ENST00000604164 KCNH6Q9H252 994 aa12.41□□□□□ -0.42
CCDC12-209ENST00000604164 DMAC2Q9NW81 257 aa12.41□□□□□ -0.42
CCDC12-209ENST00000604164 CHMP5Q9NZZ3 219 aa12.41□□□□□ -0.42
CCDC12-209ENST00000604164 SIX4Q9UIU6 781 aa12.41□□□□□ -0.42
CCDC12-209ENST00000604164 DUSP12Q9UNI6 340 aa12.41□□□□□ -0.42
CCDC12-209ENST00000604164 ARIH1Q9Y4X5 557 aaPredicted RBP12.41□□□□□ -0.42
CCDC12-209ENST00000604164 YIPF1Q9Y548 306 aa12.41□□□□□ -0.42
CCDC12-209ENST00000604164 MTMR11A4FU01 709 aa12.4□□□□□ -0.42
CCDC12-209ENST00000604164 ANHXE9PGG2 379 aa12.4□□□□□ -0.42
CCDC12-209ENST00000604164 IKBKBO14920 756 aa12.4□□□□□ -0.42
CCDC12-209ENST00000604164 KINO60870 393 aaKnown RBP12.4□□□□□ -0.42
CCDC12-209ENST00000604164 N4BP1O75113 896 aaKnown RBP12.4□□□□□ -0.42
CCDC12-209ENST00000604164 OR4Q2P0C623 313 aa12.4□□□□□ -0.42
CCDC12-209ENST00000604164 PPP1R2P41236 205 aa12.4□□□□□ -0.42
CCDC12-209ENST00000604164 TNNC1P63316 161 aa12.4□□□□□ -0.42
CCDC12-209ENST00000604164 NTHL1P78549 312 aa12.4□□□□□ -0.42
CCDC12-209ENST00000604164 ENPEPQ07075 957 aa12.4□□□□□ -0.42
CCDC12-209ENST00000604164 MAPRE1Q15691 268 aaKnown RBP12.4□□□□□ -0.42
CCDC12-209ENST00000604164 TAF12Q16514 161 aa12.4□□□□□ -0.42
CCDC12-209ENST00000604164 CEP135Q66GS9 1140 aa12.4□□□□□ -0.42
CCDC12-209ENST00000604164 LMBRD2Q68DH5 695 aaPredicted RBP12.4□□□□□ -0.42
CCDC12-209ENST00000604164 ADGRF2Q8IZF7 708 aa12.4□□□□□ -0.42
CCDC12-209ENST00000604164 OR10T2Q8NGX3 314 aa12.4□□□□□ -0.42
CCDC12-209ENST00000604164 CXorf38Q8TB03 319 aa12.4□□□□□ -0.42
CCDC12-209ENST00000604164 FEZF2Q8TBJ5 459 aa12.4□□□□□ -0.42
CCDC12-209ENST00000604164 TMC2Q8TDI7 906 aa12.4□□□□□ -0.42
CCDC12-209ENST00000604164 SMARCE1Q969G3 411 aa12.4□□□□□ -0.42
CCDC12-209ENST00000604164 MMS19Q96T76 1030 aa12.4□□□□□ -0.42
CCDC12-209ENST00000604164 PRRX2Q99811 253 aa12.4□□□□□ -0.42
CCDC12-209ENST00000604164 ABCB6Q9NP58 842 aa12.4□□□□□ -0.42
CCDC12-209ENST00000604164 HCFC1R1Q9NWW0 138 aa12.4□□□□□ -0.42
CCDC12-209ENST00000604164 DDX43Q9NXZ2 648 aaKnown RBP12.4□□□□□ -0.42
CCDC12-209ENST00000604164 FBXL21Q9UKT6 434 aa12.4□□□□□ -0.42
CCDC12-209ENST00000604164 L1RE1Q9UN81 338 aa12.4□□□□□ -0.42
CCDC12-209ENST00000604164 PCDHB5Q9Y5E4 795 aa12.4□□□□□ -0.42
CCDC12-209ENST00000604164 C5orf42Q9H799 3197 aa12.39□□□□□ -0.43
CCDC12-209ENST00000604164 STAU1O95793 577 aaKnown RBP12.39□□□□□ -0.43
CCDC12-209ENST00000604164 SRFP11831 508 aa12.39□□□□□ -0.43
CCDC12-209ENST00000604164 KRT13P13646 458 aa12.39□□□□□ -0.43
CCDC12-209ENST00000604164 P4HA1P13674 534 aa12.39□□□□□ -0.43
CCDC12-209ENST00000604164 NR2F2P24468 414 aa12.39□□□□□ -0.43
CCDC12-209ENST00000604164 EPHA5P54756 1037 aa12.39□□□□□ -0.43
CCDC12-209ENST00000604164 CLDN10P78369 228 aa12.39□□□□□ -0.43
CCDC12-209ENST00000604164 BIRC3Q13489 604 aa12.39□□□□□ -0.43
CCDC12-209ENST00000604164 SNW1Q13573 536 aaKnown RBP12.39□□□□□ -0.43
CCDC12-209ENST00000604164 STIM1Q13586 685 aa12.39□□□□□ -0.43
CCDC12-209ENST00000604164 HTR4Q13639 388 aa12.39□□□□□ -0.43
CCDC12-209ENST00000604164 EDRF1Q3B7T1 1238 aa12.39□□□□□ -0.43
CCDC12-209ENST00000604164 MGAT5BQ3V5L5 792 aa12.39□□□□□ -0.43
CCDC12-209ENST00000604164 COBLL1Q53SF7 1204 aa12.39□□□□□ -0.43
CCDC12-209ENST00000604164 ZNF658Q5TYW1 1059 aaPredicted RBP12.39□□□□□ -0.43
CCDC12-209ENST00000604164 HFE2Q6ZVN8 426 aa12.39□□□□□ -0.43
CCDC12-209ENST00000604164 INTS8Q75QN2 995 aaKnown RBP12.39□□□□□ -0.43
CCDC12-209ENST00000604164 NPAS3Q8IXF0 933 aa12.39□□□□□ -0.43
CCDC12-209ENST00000604164 SLC44A3Q8N4M1 653 aa12.39□□□□□ -0.43
CCDC12-209ENST00000604164 FBXL6Q8N531 539 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms