RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 ZSWIM1Q9BR11 485 aa18.52■□□□□ 0.55
PPFIA3-207ENST00000602716 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.52■□□□□ 0.55
PPFIA3-207ENST00000602716 PCDHA13Q9Y5I0 950 aa18.52■□□□□ 0.55
PPFIA3-207ENST00000602716 SNX9Q9Y5X1 595 aa18.52■□□□□ 0.55
PPFIA3-207ENST00000602716 BZW2Q9Y6E2 419 aaKnown RBP18.52■□□□□ 0.55
PPFIA3-207ENST00000602716 CTAGE15A4D2H0 777 aa18.51■□□□□ 0.55
PPFIA3-207ENST00000602716 ENPP3O14638 875 aa18.51■□□□□ 0.55
PPFIA3-207ENST00000602716 THP07101 528 aa18.51■□□□□ 0.55
PPFIA3-207ENST00000602716 CTAGE8P0CG41 777 aa18.51■□□□□ 0.55
PPFIA3-207ENST00000602716 BEND6Q5SZJ8 279 aaPredicted RBP18.51■□□□□ 0.55
PPFIA3-207ENST00000602716 CTAGE6Q86UF2 777 aa18.51■□□□□ 0.55
PPFIA3-207ENST00000602716 CTAGE4Q8IX94 777 aa18.51■□□□□ 0.55
PPFIA3-207ENST00000602716 LRRC52Q8N7C0 313 aa18.51■□□□□ 0.55
PPFIA3-207ENST00000602716 SEPT11Q9NVA2 429 aaKnown RBP18.51■□□□□ 0.55
PPFIA3-207ENST00000602716 NAGPAQ9UK23 515 aa18.51■□□□□ 0.55
PPFIA3-207ENST00000602716 DUSP10Q9Y6W6 482 aa18.51■□□□□ 0.55
PPFIA3-207ENST00000602716 F8W810 466 aa18.5■□□□□ 0.55
PPFIA3-207ENST00000602716 CYP3A5P20815 502 aa18.5■□□□□ 0.55
PPFIA3-207ENST00000602716 LRPAP1P30533 357 aa18.5■□□□□ 0.55
PPFIA3-207ENST00000602716 PDE6CP51160 858 aa18.5■□□□□ 0.55
PPFIA3-207ENST00000602716 CLCNKBP51801 687 aa18.5■□□□□ 0.55
PPFIA3-207ENST00000602716 PGBD4Q96DM1 585 aa18.5■□□□□ 0.55
PPFIA3-207ENST00000602716 FAM81BQ96LP2 452 aa18.5■□□□□ 0.55
PPFIA3-207ENST00000602716 MRPL45Q9BRJ2 306 aaKnown RBP18.5■□□□□ 0.55
PPFIA3-207ENST00000602716 FTHL17Q9BXU8 183 aa18.5■□□□□ 0.55
PPFIA3-207ENST00000602716 HCSTQ9UBK5 93 aa18.5■□□□□ 0.55
PPFIA3-207ENST00000602716 GUCA1BQ9UMX6 200 aa18.5■□□□□ 0.55
PPFIA3-207ENST00000602716 TMCO5BA8MYB1 307 aa18.5■□□□□ 0.55
PPFIA3-207ENST00000602716 TNNC1P63316 161 aa18.5■□□□□ 0.55
PPFIA3-207ENST00000602716 ZNF662Q6ZS27 426 aa18.5■□□□□ 0.55
PPFIA3-207ENST00000602716 MMS19Q96T76 1030 aa18.5■□□□□ 0.55
PPFIA3-207ENST00000602716 ELOVL4Q9GZR5 314 aa18.5■□□□□ 0.55
PPFIA3-207ENST00000602716 CCDC66A2RUB6 948 aa18.49■□□□□ 0.55
PPFIA3-207ENST00000602716 XPOTO43592 962 aaKnown RBP18.49■□□□□ 0.55
PPFIA3-207ENST00000602716 BRD2P25440 801 aaKnown RBP18.49■□□□□ 0.55
PPFIA3-207ENST00000602716 VAV2P52735 878 aa18.49■□□□□ 0.55
PPFIA3-207ENST00000602716 MYO1EQ12965 1108 aa18.49■□□□□ 0.55
PPFIA3-207ENST00000602716 SPA17Q15506 151 aa18.49■□□□□ 0.55
PPFIA3-207ENST00000602716 KIAA1328Q86T90 577 aa18.49■□□□□ 0.55
PPFIA3-207ENST00000602716 TFAP2BQ92481 460 aa18.49■□□□□ 0.55
PPFIA3-207ENST00000602716 JAKMIP2Q96AA8 810 aa18.49■□□□□ 0.55
PPFIA3-207ENST00000602716 PODXLO00592 558 aa18.49■□□□□ 0.55
PPFIA3-207ENST00000602716 CILPO75339 1184 aa18.49■□□□□ 0.55
PPFIA3-207ENST00000602716 ERLIN1O75477 346 aa18.49■□□□□ 0.55
PPFIA3-207ENST00000602716 SKIP12755 728 aa18.49■□□□□ 0.55
PPFIA3-207ENST00000602716 GNA15P30679 374 aa18.49■□□□□ 0.55
PPFIA3-207ENST00000602716 MAGEA1P43355 309 aa18.49■□□□□ 0.55
PPFIA3-207ENST00000602716 CDR2Q01850 454 aa18.49■□□□□ 0.55
PPFIA3-207ENST00000602716 SOWAHAQ2M3V2 549 aa18.49■□□□□ 0.55
PPFIA3-207ENST00000602716 PAN2Q504Q3 1202 aaKnown RBP18.49■□□□□ 0.55
PPFIA3-207ENST00000602716 CCDC122Q5T0U0 273 aa18.49■□□□□ 0.55
PPFIA3-207ENST00000602716 ALKBH5Q6P6C2 394 aaKnown RBP18.49■□□□□ 0.55
PPFIA3-207ENST00000602716 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.49■□□□□ 0.55
PPFIA3-207ENST00000602716 TSPAN18Q96SJ8 248 aa18.49■□□□□ 0.55
PPFIA3-207ENST00000602716 SALL4Q9UJQ4 1053 aa18.49■□□□□ 0.55
PPFIA3-207ENST00000602716 INPPL1O15357 1258 aa18.48■□□□□ 0.55
PPFIA3-207ENST00000602716 IPO7O95373 1038 aaKnown RBP18.48■□□□□ 0.55
PPFIA3-207ENST00000602716 CCDC172P0C7W6 258 aa18.48■□□□□ 0.55
PPFIA3-207ENST00000602716 TAF6P49848 677 aa18.48■□□□□ 0.55
PPFIA3-207ENST00000602716 RAD23BP54727 409 aa18.48■□□□□ 0.55
PPFIA3-207ENST00000602716 LILRA4P59901 499 aa18.48■□□□□ 0.55
PPFIA3-207ENST00000602716 KRT83P78385 493 aa18.48■□□□□ 0.55
PPFIA3-207ENST00000602716 GRIK3Q13003 919 aa18.48■□□□□ 0.55
PPFIA3-207ENST00000602716 ZNF280BQ86YH2 543 aa18.48■□□□□ 0.55
PPFIA3-207ENST00000602716 PASD1Q8IV76 773 aa18.48■□□□□ 0.55
PPFIA3-207ENST00000602716 CRIPAKQ8N1N5 446 aa18.48■□□□□ 0.55
PPFIA3-207ENST00000602716 HASPINQ8TF76 798 aa18.48■□□□□ 0.55
PPFIA3-207ENST00000602716 KBTBD7Q8WVZ9 684 aa18.48■□□□□ 0.55
PPFIA3-207ENST00000602716 ZNF560Q96MR9 790 aa18.48■□□□□ 0.55
PPFIA3-207ENST00000602716 SLC38A7Q9NVC3 462 aa18.48■□□□□ 0.55
PPFIA3-207ENST00000602716 TMEM161AQ9NX61 479 aa18.48■□□□□ 0.55
PPFIA3-207ENST00000602716 L1RE1Q9UN81 338 aa18.48■□□□□ 0.55
PPFIA3-207ENST00000602716 ERICH4A6NGS2 130 aa18.47■□□□□ 0.55
PPFIA3-207ENST00000602716 KPNA7A9QM74 516 aa18.47■□□□□ 0.55
PPFIA3-207ENST00000602716 RHOXF2BP0C7M4 288 aa18.47■□□□□ 0.55
PPFIA3-207ENST00000602716 CSF2RAP15509 400 aa18.47■□□□□ 0.55
PPFIA3-207ENST00000602716 TNFAIP3P21580 790 aa18.47■□□□□ 0.55
PPFIA3-207ENST00000602716 INCA1Q0VD86 236 aa18.47■□□□□ 0.55
PPFIA3-207ENST00000602716 HDXQ7Z353 690 aa18.47■□□□□ 0.55
PPFIA3-207ENST00000602716 FMNL3Q8IVF7 1028 aa18.47■□□□□ 0.55
PPFIA3-207ENST00000602716 SLC4A11Q8NBS3 891 aa18.47■□□□□ 0.55
PPFIA3-207ENST00000602716 NOA1Q8NC60 698 aaKnown RBP18.47■□□□□ 0.55
PPFIA3-207ENST00000602716 APBB2Q92870 758 aa18.47■□□□□ 0.55
PPFIA3-207ENST00000602716 RHOXF2Q9BQY4 288 aa18.47■□□□□ 0.55
PPFIA3-207ENST00000602716 H3BQF6 201 aa18.47■□□□□ 0.55
PPFIA3-207ENST00000602716 I3L4J1 428 aa18.47■□□□□ 0.55
PPFIA3-207ENST00000602716 DDHD2O94830 711 aa18.47■□□□□ 0.55
PPFIA3-207ENST00000602716 EOMESO95936 686 aa18.47■□□□□ 0.55
PPFIA3-207ENST00000602716 ITGB1P05556 798 aa18.47■□□□□ 0.55
PPFIA3-207ENST00000602716 TUBBP07437 444 aa18.47■□□□□ 0.55
PPFIA3-207ENST00000602716 ANXA13P27216 316 aa18.47■□□□□ 0.55
PPFIA3-207ENST00000602716 NDST1P52848 882 aa18.47■□□□□ 0.55
PPFIA3-207ENST00000602716 UPP1Q16831 310 aa18.47■□□□□ 0.55
PPFIA3-207ENST00000602716 CCDC142Q17RM4 750 aa18.47■□□□□ 0.55
PPFIA3-207ENST00000602716 GLB1LQ6UWU2 654 aa18.47■□□□□ 0.55
PPFIA3-207ENST00000602716 CD300LGQ6UXG3 332 aa18.47■□□□□ 0.55
PPFIA3-207ENST00000602716 LPIN3Q9BQK8 851 aa18.47■□□□□ 0.55
PPFIA3-207ENST00000602716 CYP3A43Q9HB55 503 aa18.47■□□□□ 0.55
PPFIA3-207ENST00000602716 ABCB6Q9NP58 842 aa18.47■□□□□ 0.55
PPFIA3-207ENST00000602716 TBC1D13Q9NVG8 400 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms