RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 ECHDC2Q86YB7 292 aa13.6□□□□□ -0.23
ZNF548-210ENST00000600442 GPIHBP1Q8IV16 184 aa13.6□□□□□ -0.23
ZNF548-210ENST00000600442 RHOT2Q8IXI1 618 aa13.6□□□□□ -0.23
ZNF548-210ENST00000600442 SYCE1Q8N0S2 351 aa13.6□□□□□ -0.23
ZNF548-210ENST00000600442 SLC30A5Q8TAD4 765 aa13.6□□□□□ -0.23
ZNF548-210ENST00000600442 PBX4Q9BYU1 374 aa13.6□□□□□ -0.23
ZNF548-210ENST00000600442 ZNF518BQ9C0D4 1074 aa13.6□□□□□ -0.23
ZNF548-210ENST00000600442 MIS12Q9H081 205 aa13.6□□□□□ -0.23
ZNF548-210ENST00000600442 SNX25Q9H3E2 840 aa13.6□□□□□ -0.23
ZNF548-210ENST00000600442 NOCTQ9UK39 431 aaKnown RBP13.6□□□□□ -0.23
ZNF548-210ENST00000600442 LRFN2Q9ULH4 789 aa13.6□□□□□ -0.23
ZNF548-210ENST00000600442 BARX2Q9UMQ3 279 aaPredicted RBP13.6□□□□□ -0.23
ZNF548-210ENST00000600442 REXO2Q9Y3B8 237 aaKnown RBP13.6□□□□□ -0.23
ZNF548-210ENST00000600442 ANO9A1A5B4 782 aa13.59□□□□□ -0.23
ZNF548-210ENST00000600442 MACROD2A1Z1Q3 448 aa13.59□□□□□ -0.23
ZNF548-210ENST00000600442 KPNA7A9QM74 516 aa13.59□□□□□ -0.23
ZNF548-210ENST00000600442 FTLP02792 175 aaPredicted RBP13.59□□□□□ -0.23
ZNF548-210ENST00000600442 WEE2P0C1S8 567 aa13.59□□□□□ -0.23
ZNF548-210ENST00000600442 TMEM253P0C7T8 217 aa13.59□□□□□ -0.23
ZNF548-210ENST00000600442 CSF2RAP15509 400 aa13.59□□□□□ -0.23
ZNF548-210ENST00000600442 COL9A1P20849 921 aa13.59□□□□□ -0.23
ZNF548-210ENST00000600442 MLH1P40692 756 aa13.59□□□□□ -0.23
ZNF548-210ENST00000600442 ASPAP45381 313 aa13.59□□□□□ -0.23
ZNF548-210ENST00000600442 GPC5P78333 572 aa13.59□□□□□ -0.23
ZNF548-210ENST00000600442 GRIK3Q13003 919 aa13.59□□□□□ -0.23
ZNF548-210ENST00000600442 PPIGQ13427 754 aaKnown RBP eCLIP13.59□□□□□ -0.238e-8■■□□□ 12.3
ZNF548-210ENST00000600442 GLRA4Q5JXX5 417 aa13.59□□□□□ -0.23
ZNF548-210ENST00000600442 TAF3Q5VWG9 929 aa13.59□□□□□ -0.23
ZNF548-210ENST00000600442 SCARA5Q6ZMJ2 495 aa13.59□□□□□ -0.23
ZNF548-210ENST00000600442 NOP9Q86U38 636 aaKnown RBP13.59□□□□□ -0.23
ZNF548-210ENST00000600442 UNC93AQ86WB7 457 aa13.59□□□□□ -0.23
ZNF548-210ENST00000600442 TMEM35BQ8NCS4 154 aa13.59□□□□□ -0.23
ZNF548-210ENST00000600442 APPL2Q8NEU8 664 aa13.59□□□□□ -0.23
ZNF548-210ENST00000600442 C18orf25Q96B23 403 aaPredicted RBP13.59□□□□□ -0.23
ZNF548-210ENST00000600442 ZMAT2Q96NC0 199 aaKnown RBP13.59□□□□□ -0.23
ZNF548-210ENST00000600442 FAM193BQ96PV7 902 aaPredicted RBP13.59□□□□□ -0.23
ZNF548-210ENST00000600442 PPP1R10Q96QC0 940 aaKnown RBP13.59□□□□□ -0.23
ZNF548-210ENST00000600442 GAD1Q99259 594 aa13.59□□□□□ -0.23
ZNF548-210ENST00000600442 GAS2L1Q99501 681 aaPredicted RBP13.59□□□□□ -0.23
ZNF548-210ENST00000600442 ARID3AQ99856 593 aa13.59□□□□□ -0.23
ZNF548-210ENST00000600442 NT5C1AQ9BXI3 368 aa13.59□□□□□ -0.23
ZNF548-210ENST00000600442 TSPYL2Q9H2G4 693 aaPredicted RBP13.59□□□□□ -0.23
ZNF548-210ENST00000600442 RNF39Q9H2S5 420 aa13.59□□□□□ -0.23
ZNF548-210ENST00000600442 PRDM12Q9H4Q4 367 aa13.59□□□□□ -0.23
ZNF548-210ENST00000600442 ELAC1Q9H777 363 aaKnown RBP13.59□□□□□ -0.23
ZNF548-210ENST00000600442 GDAP2Q9NXN4 497 aa13.59□□□□□ -0.23
ZNF548-210ENST00000600442 TUBGCP4Q9UGJ1 667 aa13.59□□□□□ -0.23
ZNF548-210ENST00000600442 LCMT1Q9UIC8 334 aa13.59□□□□□ -0.23
ZNF548-210ENST00000600442 PCDHB7Q9Y5E2 793 aa13.59□□□□□ -0.23
ZNF548-210ENST00000600442 SNX9Q9Y5X1 595 aa13.59□□□□□ -0.23
ZNF548-210ENST00000600442 PIRO00625 290 aa13.58□□□□□ -0.24
ZNF548-210ENST00000600442 ACRP10323 421 aa13.58□□□□□ -0.24
ZNF548-210ENST00000600442 CD19P15391 556 aa13.58□□□□□ -0.24
ZNF548-210ENST00000600442 ARHGAP25P42331 645 aa13.58□□□□□ -0.24
ZNF548-210ENST00000600442 ZNF132P52740 706 aa13.58□□□□□ -0.24
ZNF548-210ENST00000600442 FAM189BP81408 668 aa13.58□□□□□ -0.24
ZNF548-210ENST00000600442 RASIP1Q5U651 963 aa13.58□□□□□ -0.24
ZNF548-210ENST00000600442 ACAD10Q6JQN1 1059 aa13.58□□□□□ -0.24
ZNF548-210ENST00000600442 ZNF365Q70YC5 407 aa13.58□□□□□ -0.24
ZNF548-210ENST00000600442 TMEM199Q8N511 208 aa13.58□□□□□ -0.24
ZNF548-210ENST00000600442 ATXN2LQ8WWM7 1075 aaKnown RBP13.58□□□□□ -0.24
ZNF548-210ENST00000600442 TMEM176AQ96HP8 235 aa13.58□□□□□ -0.24
ZNF548-210ENST00000600442 VCPIP1Q96JH7 1222 aa13.58□□□□□ -0.24
ZNF548-210ENST00000600442 TNIP3Q96KP6 325 aa13.58□□□□□ -0.24
ZNF548-210ENST00000600442 NAPGQ99747 312 aaPredicted RBP13.58□□□□□ -0.24
ZNF548-210ENST00000600442 TMEM161AQ9NX61 479 aa13.58□□□□□ -0.24
ZNF548-210ENST00000600442 DSEQ9UL01 958 aa13.58□□□□□ -0.24
ZNF548-210ENST00000600442 JRKLQ9Y4A0 524 aa13.58□□□□□ -0.24
ZNF548-210ENST00000600442 TMCO5BA8MYB1 307 aa13.57□□□□□ -0.24
ZNF548-210ENST00000600442 ZNF263O14978 683 aa13.57□□□□□ -0.24
ZNF548-210ENST00000600442 EFCAB14O75071 495 aa13.57□□□□□ -0.24
ZNF548-210ENST00000600442 MMEP08473 750 aa13.57□□□□□ -0.24
ZNF548-210ENST00000600442 VDRP11473 427 aa13.57□□□□□ -0.24
ZNF548-210ENST00000600442 GALCP54803 685 aa13.57□□□□□ -0.24
ZNF548-210ENST00000600442 SLC8A3P57103 927 aa13.57□□□□□ -0.24
ZNF548-210ENST00000600442 RNASELQ05823 741 aaKnown RBP13.57□□□□□ -0.24
ZNF548-210ENST00000600442 INCA1Q0VD86 236 aa13.57□□□□□ -0.24
ZNF548-210ENST00000600442 CLEC16AQ2KHT3 1053 aa13.57□□□□□ -0.24
ZNF548-210ENST00000600442 SGO2Q562F6 1265 aa13.57□□□□□ -0.24
ZNF548-210ENST00000600442 PLEKHG4Q58EX7 1191 aa13.57□□□□□ -0.24
ZNF548-210ENST00000600442 METTL23Q86XA0 190 aa13.57□□□□□ -0.24
ZNF548-210ENST00000600442 TMEM86AQ8N2M4 240 aa13.57□□□□□ -0.24
ZNF548-210ENST00000600442 TOP6BLQ8N6T0 577 aa13.57□□□□□ -0.24
ZNF548-210ENST00000600442 SPATA18Q8TC71 538 aa13.57□□□□□ -0.24
ZNF548-210ENST00000600442 SLC20A1Q8WUM9 679 aa13.57□□□□□ -0.24
ZNF548-210ENST00000600442 FAM84AQ96KN4 292 aa13.57□□□□□ -0.24
ZNF548-210ENST00000600442 HEXIM2Q96MH2 286 aaKnown RBP13.57□□□□□ -0.24
ZNF548-210ENST00000600442 SYT11Q9BT88 431 aa13.57□□□□□ -0.24
ZNF548-210ENST00000600442 PPP1R12CQ9BZL4 782 aa13.57□□□□□ -0.24
ZNF548-210ENST00000600442 ISCUQ9H1K1 167 aa13.57□□□□□ -0.24
ZNF548-210ENST00000600442 MRPL47Q9HD33 250 aaKnown RBP13.57□□□□□ -0.24
ZNF548-210ENST00000600442 POLIQ9UNA4 740 aa13.57□□□□□ -0.24
ZNF548-210ENST00000600442 CHD7Q9P2D1 2997 aa13.57□□□□□ -0.24
ZNF548-210ENST00000600442 REV3LO60673 3130 aa13.56□□□□□ -0.24
ZNF548-210ENST00000600442 CARNS1A5YM72 827 aa13.56□□□□□ -0.24
ZNF548-210ENST00000600442 C9IYK1 514 aa13.56□□□□□ -0.24
ZNF548-210ENST00000600442 MEFVO15553 781 aaPredicted RBP13.56□□□□□ -0.24
ZNF548-210ENST00000600442 TRAPPC3O43617 180 aa13.56□□□□□ -0.24
ZNF548-210ENST00000600442 CILPO75339 1184 aa13.56□□□□□ -0.24
ZNF548-210ENST00000600442 URI1O94763 535 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms