RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 KALRNO60229 2985 aa19.27■□□□□ 0.68
SSBP4-207ENST00000600244 GCFC2P16383 781 aaKnown RBP19.27■□□□□ 0.68
SSBP4-207ENST00000600244 ALDH1A3P47895 512 aa19.27■□□□□ 0.68
SSBP4-207ENST00000600244 CENPPQ6IPU0 288 aa19.27■□□□□ 0.68
SSBP4-207ENST00000600244 MAEAQ7L5Y9 396 aa19.27■□□□□ 0.68
SSBP4-207ENST00000600244 OLIG1Q8TAK6 271 aa19.27■□□□□ 0.68
SSBP4-207ENST00000600244 BSNDQ8WZ55 320 aa19.27■□□□□ 0.68
SSBP4-207ENST00000600244 CNOT6LQ96LI5 555 aaKnown RBP19.27■□□□□ 0.68
SSBP4-207ENST00000600244 PGLYRP2Q96PD5 576 aa19.27■□□□□ 0.68
SSBP4-207ENST00000600244 SLC46A2Q9BY10 475 aa19.27■□□□□ 0.68
SSBP4-207ENST00000600244 TNRC6BQ9UPQ9 1833 aaKnown RBP19.26■□□□□ 0.67
SSBP4-207ENST00000600244 TK2O00142 265 aa19.26■□□□□ 0.67
SSBP4-207ENST00000600244 USO1O60763 962 aaKnown RBP19.26■□□□□ 0.67
SSBP4-207ENST00000600244 OAZ2O95190 189 aa19.26■□□□□ 0.67
SSBP4-207ENST00000600244 CD59P13987 128 aa19.26■□□□□ 0.67
SSBP4-207ENST00000600244 PLA2G2AP14555 144 aa19.26■□□□□ 0.67
SSBP4-207ENST00000600244 ARSAP15289 507 aa19.26■□□□□ 0.67
SSBP4-207ENST00000600244 U2AF2P26368 475 aaKnown RBP eCLIP19.26■□□□□ 0.67
SSBP4-207ENST00000600244 NT5DC1Q5TFE4 455 aa19.26■□□□□ 0.67
SSBP4-207ENST00000600244 KRT25Q7Z3Z0 450 aa19.26■□□□□ 0.67
SSBP4-207ENST00000600244 HDDC3Q8N4P3 179 aa19.26■□□□□ 0.67
SSBP4-207ENST00000600244 PIGOQ8TEQ8 1089 aa19.26■□□□□ 0.67
SSBP4-207ENST00000600244 TBC1D32Q96NH3 1257 aa19.26■□□□□ 0.67
SSBP4-207ENST00000600244 IL21Q9HBE4 155 aa19.26■□□□□ 0.67
SSBP4-207ENST00000600244 DKK4Q9UBT3 224 aa19.26■□□□□ 0.67
SSBP4-207ENST00000600244 PCDHB8Q9UN66 801 aa19.26■□□□□ 0.67
SSBP4-207ENST00000600244 SLC27A5Q9Y2P5 690 aa19.26■□□□□ 0.67
SSBP4-207ENST00000600244 SNX14Q9Y5W7 946 aa19.26■□□□□ 0.67
SSBP4-207ENST00000600244 A0A087WWV3 80 aa19.25■□□□□ 0.67
SSBP4-207ENST00000600244 OR4Q2P0C623 313 aa19.25■□□□□ 0.67
SSBP4-207ENST00000600244 XRCC6P12956 609 aaKnown RBP eCLIP19.25■□□□□ 0.67
SSBP4-207ENST00000600244 KCNE1P15382 129 aa19.25■□□□□ 0.67
SSBP4-207ENST00000600244 GJA4P35212 333 aa19.25■□□□□ 0.67
SSBP4-207ENST00000600244 PTGER3P43115 390 aa19.25■□□□□ 0.67
SSBP4-207ENST00000600244 CYP4F8P98187 520 aa19.25■□□□□ 0.67
SSBP4-207ENST00000600244 GPR17Q13304 367 aa19.25■□□□□ 0.67
SSBP4-207ENST00000600244 PEAR1Q5VY43 1037 aaPredicted RBP19.25■□□□□ 0.67
SSBP4-207ENST00000600244 GALNT17Q6IS24 598 aa19.25■□□□□ 0.67
SSBP4-207ENST00000600244 LPCAT2Q7L5N7 544 aa19.25■□□□□ 0.67
SSBP4-207ENST00000600244 NEK8Q86SG6 692 aa19.25■□□□□ 0.67
SSBP4-207ENST00000600244 CEP120Q8N960 986 aa19.25■□□□□ 0.67
SSBP4-207ENST00000600244 BRF1Q92994 677 aa19.25■□□□□ 0.67
SSBP4-207ENST00000600244 FNBP1Q96RU3 617 aa19.25■□□□□ 0.67
SSBP4-207ENST00000600244 UBL7Q96S82 380 aaPredicted RBP19.25■□□□□ 0.67
SSBP4-207ENST00000600244 KIAA1549LQ6ZVL6 1849 aa19.24■□□□□ 0.67
SSBP4-207ENST00000600244 GRM5P41594 1212 aa19.24■□□□□ 0.67
SSBP4-207ENST00000600244 ANO7Q6IWH7 933 aa19.24■□□□□ 0.67
SSBP4-207ENST00000600244 Q6ZUG5 572 aa19.24■□□□□ 0.67
SSBP4-207ENST00000600244 POTEDQ86YR6 584 aa19.24■□□□□ 0.67
SSBP4-207ENST00000600244 CMTM8Q8IZV2 173 aa19.24■□□□□ 0.67
SSBP4-207ENST00000600244 MCPH1Q8NEM0 835 aa19.24■□□□□ 0.67
SSBP4-207ENST00000600244 MDGA1Q8NFP4 955 aa19.24■□□□□ 0.67
SSBP4-207ENST00000600244 RIN3Q8TB24 985 aa19.24■□□□□ 0.67
SSBP4-207ENST00000600244 C18orf25Q96B23 403 aaPredicted RBP19.24■□□□□ 0.67
SSBP4-207ENST00000600244 CRELD1Q96HD1 420 aa19.24■□□□□ 0.67
SSBP4-207ENST00000600244 OXCT2Q9BYC2 517 aaPredicted RBP19.24■□□□□ 0.67
SSBP4-207ENST00000600244 TOPORSQ9NS56 1045 aaPredicted RBP19.24■□□□□ 0.67
SSBP4-207ENST00000600244 PILRBQ9UKJ0 227 aa19.24■□□□□ 0.67
SSBP4-207ENST00000600244 CCL26Q9Y258 94 aa19.24■□□□□ 0.67
SSBP4-207ENST00000600244 PTPRDP23468 1912 aa19.23■□□□□ 0.67
SSBP4-207ENST00000600244 MYO16Q9Y6X6 1858 aa19.23■□□□□ 0.67
SSBP4-207ENST00000600244 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.23■□□□□ 0.67
SSBP4-207ENST00000600244 MARCH6O60337 910 aa19.23■□□□□ 0.67
SSBP4-207ENST00000600244 OPHN1O60890 802 aa19.23■□□□□ 0.67
SSBP4-207ENST00000600244 HMGB1P09429 215 aaKnown RBP19.23■□□□□ 0.67
SSBP4-207ENST00000600244 CPA1P15085 419 aa19.23■□□□□ 0.67
SSBP4-207ENST00000600244 MARCKSP29966 332 aaPredicted RBP19.23■□□□□ 0.67
SSBP4-207ENST00000600244 MCM4P33991 863 aa19.23■□□□□ 0.67
SSBP4-207ENST00000600244 P2RY2P41231 377 aa19.23■□□□□ 0.67
SSBP4-207ENST00000600244 TRIP6Q15654 476 aaKnown RBP19.23■□□□□ 0.67
SSBP4-207ENST00000600244 ATF7IP2Q5U623 682 aa19.23■□□□□ 0.67
SSBP4-207ENST00000600244 SLFN12Q8IYM2 578 aa19.23■□□□□ 0.67
SSBP4-207ENST00000600244 TMEFF1Q8IYR6 380 aa19.23■□□□□ 0.67
SSBP4-207ENST00000600244 TTC9BQ8N6N2 239 aa19.23■□□□□ 0.67
SSBP4-207ENST00000600244 ATAD1Q8NBU5 361 aa19.23■□□□□ 0.67
SSBP4-207ENST00000600244 SLC39A7Q92504 469 aa19.23■□□□□ 0.67
SSBP4-207ENST00000600244 USP13Q92995 863 aaPredicted RBP19.23■□□□□ 0.67
SSBP4-207ENST00000600244 CD101Q93033 1021 aa19.23■□□□□ 0.67
SSBP4-207ENST00000600244 EXOC4Q96A65 974 aa19.23■□□□□ 0.67
SSBP4-207ENST00000600244 CCDC43Q96MW1 224 aaKnown RBP19.23■□□□□ 0.67
SSBP4-207ENST00000600244 FSCN3Q9NQT6 498 aa19.23■□□□□ 0.67
SSBP4-207ENST00000600244 SLC6A14Q9UN76 642 aa19.23■□□□□ 0.67
SSBP4-207ENST00000600244 ZNF462Q96JM2 2506 aa19.23■□□□□ 0.67
SSBP4-207ENST00000600244 CFAP46Q8IYW2 2715 aa19.23■□□□□ 0.67
SSBP4-207ENST00000600244 A0A087WV48 116 aa19.22■□□□□ 0.67
SSBP4-207ENST00000600244 M0QZQ0 153 aa19.22■□□□□ 0.67
SSBP4-207ENST00000600244 CCNT1O60563 726 aaKnown RBP19.22■□□□□ 0.67
SSBP4-207ENST00000600244 SOAT2O75908 522 aa19.22■□□□□ 0.67
SSBP4-207ENST00000600244 LIG1P18858 919 aa19.22■□□□□ 0.67
SSBP4-207ENST00000600244 HOXD12P35452 270 aa19.22■□□□□ 0.67
SSBP4-207ENST00000600244 DPP6P42658 865 aa19.22■□□□□ 0.67
SSBP4-207ENST00000600244 NAMPTP43490 491 aa19.22■□□□□ 0.67
SSBP4-207ENST00000600244 YARSP54577 528 aaKnown RBP19.22■□□□□ 0.67
SSBP4-207ENST00000600244 ANAPC15P60006 121 aa19.22■□□□□ 0.67
SSBP4-207ENST00000600244 YWHAHQ04917 246 aaPredicted RBP19.22■□□□□ 0.67
SSBP4-207ENST00000600244 KRT32Q14532 448 aa19.22■□□□□ 0.67
SSBP4-207ENST00000600244 SPDYCQ5MJ68 293 aa19.22■□□□□ 0.67
SSBP4-207ENST00000600244 LARP1BQ659C4 914 aaKnown RBP19.22■□□□□ 0.67
SSBP4-207ENST00000600244 ARMCX6Q7L4S7 300 aa19.22■□□□□ 0.67
SSBP4-207ENST00000600244 ITIH5Q86UX2 942 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms