RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 VWA3BQ502W6 1294 aa17.74■□□□□ 0.43
SHKBP1-219ENST00000599575 WSCD1Q658N2 575 aa17.74■□□□□ 0.43
SHKBP1-219ENST00000599575 PRSS55Q6UWB4 352 aaPredicted RBP17.74■□□□□ 0.43
SHKBP1-219ENST00000599575 DHX40Q8IX18 779 aaKnown RBP17.74■□□□□ 0.43
SHKBP1-219ENST00000599575 ADGRF2Q8IZF7 708 aa17.74■□□□□ 0.43
SHKBP1-219ENST00000599575 ZNF461Q8TAF7 563 aa17.74■□□□□ 0.43
SHKBP1-219ENST00000599575 AUTS2Q8WXX7 1259 aa17.74■□□□□ 0.43
SHKBP1-219ENST00000599575 CASP10Q92851 521 aa17.74■□□□□ 0.43
SHKBP1-219ENST00000599575 PABPC5Q96DU9 382 aaKnown RBP17.74■□□□□ 0.43
SHKBP1-219ENST00000599575 DZANK1Q9NVP4 752 aa17.74■□□□□ 0.43
SHKBP1-219ENST00000599575 HSFX1Q9UBD0 423 aa17.74■□□□□ 0.43
SHKBP1-219ENST00000599575 LIMA1Q9UHB6 759 aaKnown RBP17.74■□□□□ 0.43
SHKBP1-219ENST00000599575 FBXL5Q9UKA1 691 aa17.74■□□□□ 0.43
SHKBP1-219ENST00000599575 GLUD1P00367 558 aa17.73■□□□□ 0.43
SHKBP1-219ENST00000599575 HOXB8P17481 243 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-219ENST00000599575 TBXAS1P24557 533 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-219ENST00000599575 OR1D2P34982 312 aa17.73■□□□□ 0.43
SHKBP1-219ENST00000599575 CLCN4P51793 760 aa17.73■□□□□ 0.43
SHKBP1-219ENST00000599575 GPR17Q13304 367 aa17.73■□□□□ 0.43
SHKBP1-219ENST00000599575 MAPRE1Q15691 268 aaKnown RBP17.73■□□□□ 0.43
SHKBP1-219ENST00000599575 LILRA6Q6PI73 481 aa17.73■□□□□ 0.43
SHKBP1-219ENST00000599575 GBP6Q6ZN66 633 aa17.73■□□□□ 0.43
SHKBP1-219ENST00000599575 ADGRD2Q7Z7M1 963 aa17.73■□□□□ 0.43
SHKBP1-219ENST00000599575 UNC93AQ86WB7 457 aa17.73■□□□□ 0.43
SHKBP1-219ENST00000599575 DCP1BQ8IZD4 617 aaKnown RBP17.73■□□□□ 0.43
SHKBP1-219ENST00000599575 TMEM130Q8N3G9 435 aa17.73■□□□□ 0.43
SHKBP1-219ENST00000599575 EHBP1Q8NDI1 1231 aa17.73■□□□□ 0.43
SHKBP1-219ENST00000599575 C2orf15Q8WU43 125 aaKnown RBP17.73■□□□□ 0.43
SHKBP1-219ENST00000599575 JAKMIP2Q96AA8 810 aa17.73■□□□□ 0.43
SHKBP1-219ENST00000599575 BCO2Q9BYV7 579 aa17.73■□□□□ 0.43
SHKBP1-219ENST00000599575 TSPY26PQ9H489 355 aa17.73■□□□□ 0.43
SHKBP1-219ENST00000599575 NXF1Q9UBU9 619 aaKnown RBP17.73■□□□□ 0.43
SHKBP1-219ENST00000599575 COG5Q9UP83 839 aa17.73■□□□□ 0.43
SHKBP1-219ENST00000599575 TIMM13Q9Y5L4 95 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-219ENST00000599575 CDY1Q9Y6F8 540 aa17.73■□□□□ 0.43
SHKBP1-219ENST00000599575 GOLGA6L19H0YKK7 550 aa17.72■□□□□ 0.43
SHKBP1-219ENST00000599575 ABLIM3O94929 683 aa17.72■□□□□ 0.43
SHKBP1-219ENST00000599575 CLSTN1O94985 981 aa17.72■□□□□ 0.43
SHKBP1-219ENST00000599575 YWHAEP62258 255 aaKnown RBP17.72■□□□□ 0.43
SHKBP1-219ENST00000599575 TSPY1Q01534 308 aa17.72■□□□□ 0.43
SHKBP1-219ENST00000599575 ADAM15Q13444 863 aa17.72■□□□□ 0.43
SHKBP1-219ENST00000599575 NFE2Q16621 373 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-219ENST00000599575 UVSSAQ2YD98 709 aa17.72■□□□□ 0.43
SHKBP1-219ENST00000599575 RBM23Q86U06 439 aaKnown RBP17.72■□□□□ 0.43
SHKBP1-219ENST00000599575 MAFAQ8NHW3 353 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-219ENST00000599575 SLC22A17Q8WUG5 538 aa17.72■□□□□ 0.43
SHKBP1-219ENST00000599575 SEMA4DQ92854 862 aa17.72■□□□□ 0.43
SHKBP1-219ENST00000599575 NT5C1BQ96P26 610 aa17.72■□□□□ 0.43
SHKBP1-219ENST00000599575 SNX25Q9H3E2 840 aa17.72■□□□□ 0.43
SHKBP1-219ENST00000599575 CBX8Q9HC52 389 aa17.72■□□□□ 0.43
SHKBP1-219ENST00000599575 DDX43Q9NXZ2 648 aaKnown RBP17.72■□□□□ 0.43
SHKBP1-219ENST00000599575 CDH9Q9ULB4 789 aa17.72■□□□□ 0.43
SHKBP1-219ENST00000599575 PCDHGC5Q9Y5F6 944 aa17.72■□□□□ 0.43
SHKBP1-219ENST00000599575 HCFC2Q9Y5Z7 792 aa17.72■□□□□ 0.43
SHKBP1-219ENST00000599575 MYO9BQ13459 2157 aa17.72■□□□□ 0.43
SHKBP1-219ENST00000599575 ATF2P15336 505 aa17.71■□□□□ 0.43
SHKBP1-219ENST00000599575 GNL1P36915 607 aaPredicted RBP17.71■□□□□ 0.43
SHKBP1-219ENST00000599575 ASPAP45381 313 aa17.71■□□□□ 0.43
SHKBP1-219ENST00000599575 GCNT1Q02742 428 aa17.71■□□□□ 0.43
SHKBP1-219ENST00000599575 INCA1Q0VD86 236 aa17.71■□□□□ 0.43
SHKBP1-219ENST00000599575 KRT31Q15323 416 aa17.71■□□□□ 0.43
SHKBP1-219ENST00000599575 EXOC3L4Q17RC7 722 aa17.71■□□□□ 0.43
SHKBP1-219ENST00000599575 MIIPQ5JXC2 388 aa17.71■□□□□ 0.43
SHKBP1-219ENST00000599575 SCARA3Q6AZY7 606 aa17.71■□□□□ 0.43
SHKBP1-219ENST00000599575 CYP26C1Q6V0L0 522 aa17.71■□□□□ 0.43
SHKBP1-219ENST00000599575 ENOSF1Q7L5Y1 443 aa17.71■□□□□ 0.43
SHKBP1-219ENST00000599575 MICALL1Q8N3F8 863 aa17.71■□□□□ 0.43
SHKBP1-219ENST00000599575 LMO3Q8TAP4 145 aa17.71■□□□□ 0.43
SHKBP1-219ENST00000599575 KBTBD7Q8WVZ9 684 aa17.71■□□□□ 0.43
SHKBP1-219ENST00000599575 TNIP3Q96KP6 325 aa17.71■□□□□ 0.43
SHKBP1-219ENST00000599575 RHOBTB2Q9BYZ6 727 aa17.71■□□□□ 0.43
SHKBP1-219ENST00000599575 ZCWPW1Q9H0M4 648 aa17.71■□□□□ 0.43
SHKBP1-219ENST00000599575 HSD3B7Q9H2F3 369 aa17.71■□□□□ 0.43
SHKBP1-219ENST00000599575 GCNT4Q9P109 453 aa17.71■□□□□ 0.43
SHKBP1-219ENST00000599575 AFF4Q9UHB7 1163 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-219ENST00000599575 DAAM1Q9Y4D1 1078 aa17.71■□□□□ 0.43
SHKBP1-219ENST00000599575 PRRC2BQ5JSZ5 2229 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-219ENST00000599575 PER2O15055 1255 aa17.7■□□□□ 0.42
SHKBP1-219ENST00000599575 TGM5O43548 720 aa17.7■□□□□ 0.42
SHKBP1-219ENST00000599575 CSPG5O95196 566 aa17.7■□□□□ 0.42
SHKBP1-219ENST00000599575 PAPLNO95428 1278 aa17.7■□□□□ 0.42
SHKBP1-219ENST00000599575 CPB1P15086 417 aa17.7■□□□□ 0.42
SHKBP1-219ENST00000599575 ROR1Q01973 937 aa17.7■□□□□ 0.42
SHKBP1-219ENST00000599575 FKBP15Q5T1M5 1219 aa17.7■□□□□ 0.42
SHKBP1-219ENST00000599575 CCDC149Q6ZUS6 474 aa17.7■□□□□ 0.42
SHKBP1-219ENST00000599575 TCEAL8Q8IYN2 117 aa17.7■□□□□ 0.42
SHKBP1-219ENST00000599575 PI4K2AQ9BTU6 479 aa17.7■□□□□ 0.42
SHKBP1-219ENST00000599575 APOBEC3GQ9HC16 384 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-219ENST00000599575 BARX2Q9UMQ3 279 aaPredicted RBP17.7■□□□□ 0.42
SHKBP1-219ENST00000599575 SCN1AP35498 2009 aa17.69■□□□□ 0.42
SHKBP1-219ENST00000599575 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.69■□□□□ 0.42
SHKBP1-219ENST00000599575 POU2F2P09086 479 aa17.69■□□□□ 0.42
SHKBP1-219ENST00000599575 RPL17P18621 184 aaKnown RBP17.69■□□□□ 0.42
SHKBP1-219ENST00000599575 RFX1P22670 979 aa17.69■□□□□ 0.42
SHKBP1-219ENST00000599575 HOXA9P31269 272 aa17.69■□□□□ 0.42
SHKBP1-219ENST00000599575 ELF1P32519 619 aa17.69■□□□□ 0.42
SHKBP1-219ENST00000599575 CUL2Q13617 745 aa17.69■□□□□ 0.42
SHKBP1-219ENST00000599575 FILIP1LQ4L180 1135 aa17.69■□□□□ 0.42
SHKBP1-219ENST00000599575 HSP90AA4PQ58FG1 418 aa17.69■□□□□ 0.42
SHKBP1-219ENST00000599575 INTS6LQ5JSJ4 861 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms