RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 TAF6P49848 677 aa20.24■□□□□ 0.83
PNKP-213ENST00000599543 VITQ6UXI7 678 aa20.24■□□□□ 0.83
PNKP-213ENST00000599543 METTL23Q86XA0 190 aa20.24■□□□□ 0.83
PNKP-213ENST00000599543 TMC8Q8IU68 726 aa20.24■□□□□ 0.83
PNKP-213ENST00000599543 ATAD1Q8NBU5 361 aa20.24■□□□□ 0.83
PNKP-213ENST00000599543 OR10T2Q8NGX3 314 aa20.24■□□□□ 0.83
PNKP-213ENST00000599543 SHKBP1Q8TBC3 707 aa20.24■□□□□ 0.83
PNKP-213ENST00000599543 DEPDC1BQ8WUY9 529 aa20.24■□□□□ 0.83
PNKP-213ENST00000599543 DNAJC19Q96DA6 116 aa20.24■□□□□ 0.83
PNKP-213ENST00000599543 ACCSQ96QU6 501 aa20.24■□□□□ 0.83
PNKP-213ENST00000599543 TMEM209Q96SK2 561 aa20.24■□□□□ 0.83
PNKP-213ENST00000599543 PYM1Q9BRP8 204 aaKnown RBP20.24■□□□□ 0.83
PNKP-213ENST00000599543 DNAJC25Q9H1X3 360 aa20.24■□□□□ 0.83
PNKP-213ENST00000599543 OTOGLQ3ZCN5 2332 aa20.24■□□□□ 0.83
PNKP-213ENST00000599543 A0A087X0B3 334 aa20.23■□□□□ 0.83
PNKP-213ENST00000599543 TULP1O00294 542 aaPredicted RBP20.23■□□□□ 0.83
PNKP-213ENST00000599543 IDEP14735 1019 aa20.23■□□□□ 0.83
PNKP-213ENST00000599543 ADSSP30520 456 aa20.23■□□□□ 0.83
PNKP-213ENST00000599543 GDI1P31150 447 aa20.23■□□□□ 0.83
PNKP-213ENST00000599543 VIPR2P41587 438 aa20.23■□□□□ 0.83
PNKP-213ENST00000599543 KCNA1Q09470 495 aa20.23■□□□□ 0.83
PNKP-213ENST00000599543 SLC39A12Q504Y0 691 aa20.23■□□□□ 0.83
PNKP-213ENST00000599543 L1TD1Q5T7N2 865 aaKnown RBP20.23■□□□□ 0.83
PNKP-213ENST00000599543 ITIH5Q86UX2 942 aa20.23■□□□□ 0.83
PNKP-213ENST00000599543 NT5DC4Q86YG4 428 aa20.23■□□□□ 0.83
PNKP-213ENST00000599543 PSMG2Q969U7 264 aa20.23■□□□□ 0.83
PNKP-213ENST00000599543 TRPV4Q9HBA0 871 aa20.23■□□□□ 0.83
PNKP-213ENST00000599543 GDPD2Q9HCC8 539 aa20.23■□□□□ 0.83
PNKP-213ENST00000599543 OLFML3Q9NRN5 406 aa20.23■□□□□ 0.83
PNKP-213ENST00000599543 HSFX1Q9UBD0 423 aa20.23■□□□□ 0.83
PNKP-213ENST00000599543 ASB3Q9Y575 518 aa20.23■□□□□ 0.83
PNKP-213ENST00000599543 MORC2Q9Y6X9 1032 aaPredicted RBP20.23■□□□□ 0.83
PNKP-213ENST00000599543 MAN2B1O00754 1011 aa20.22■□□□□ 0.83
PNKP-213ENST00000599543 CYB561D2O14569 222 aa20.22■□□□□ 0.83
PNKP-213ENST00000599543 PPP6R2O75170 966 aa20.22■□□□□ 0.83
PNKP-213ENST00000599543 SOAT2O75908 522 aa20.22■□□□□ 0.83
PNKP-213ENST00000599543 FGF19O95750 216 aa20.22■□□□□ 0.83
PNKP-213ENST00000599543 ME1P48163 572 aa20.22■□□□□ 0.83
PNKP-213ENST00000599543 SV2CQ496J9 727 aa20.22■□□□□ 0.83
PNKP-213ENST00000599543 SHC4Q6S5L8 630 aa20.22■□□□□ 0.83
PNKP-213ENST00000599543 CRELD2Q6UXH1 353 aaPredicted RBP20.22■□□□□ 0.83
PNKP-213ENST00000599543 EFCAB13Q8IY85 973 aa20.22■□□□□ 0.83
PNKP-213ENST00000599543 MAML2Q8IZL2 1156 aaPredicted RBP20.22■□□□□ 0.83
PNKP-213ENST00000599543 SYCP3Q8IZU3 236 aa20.22■□□□□ 0.83
PNKP-213ENST00000599543 THEM5Q8N1Q8 247 aa20.22■□□□□ 0.83
PNKP-213ENST00000599543 TTC9BQ8N6N2 239 aa20.22■□□□□ 0.83
PNKP-213ENST00000599543 PDILTQ8N807 584 aa20.22■□□□□ 0.83
PNKP-213ENST00000599543 E2F7Q96AV8 911 aa20.22■□□□□ 0.83
PNKP-213ENST00000599543 ZNF560Q96MR9 790 aa20.22■□□□□ 0.83
PNKP-213ENST00000599543 SEPT5Q99719 369 aaPredicted RBP20.22■□□□□ 0.83
PNKP-213ENST00000599543 FAM213AQ9BRX8 229 aa20.22■□□□□ 0.83
PNKP-213ENST00000599543 STRA6Q9BX79 667 aa20.22■□□□□ 0.83
PNKP-213ENST00000599543 LRRC3Q9BY71 257 aa20.22■□□□□ 0.83
PNKP-213ENST00000599543 ZNF334Q9HCZ1 680 aaPredicted RBP20.22■□□□□ 0.83
PNKP-213ENST00000599543 FBXO4Q9UKT5 387 aa20.22■□□□□ 0.83
PNKP-213ENST00000599543 PCDHA7Q9UN72 937 aa20.22■□□□□ 0.83
PNKP-213ENST00000599543 PCDHB13Q9Y5F0 798 aa20.22■□□□□ 0.83
PNKP-213ENST00000599543 DMXL1Q9Y485 3027 aa20.21■□□□□ 0.83
PNKP-213ENST00000599543 ZNF263O14978 683 aa20.21■□□□□ 0.83
PNKP-213ENST00000599543 RPS9P46781 194 aaKnown RBP20.21■□□□□ 0.83
PNKP-213ENST00000599543 TUFMP49411 452 aaKnown RBP20.21■□□□□ 0.83
PNKP-213ENST00000599543 ALCAMQ13740 583 aa20.21■□□□□ 0.83
PNKP-213ENST00000599543 VEPH1Q14D04 833 aa20.21■□□□□ 0.83
PNKP-213ENST00000599543 ZNF528Q3MIS6 628 aa20.21■□□□□ 0.83
PNKP-213ENST00000599543 MGAT5BQ3V5L5 792 aa20.21■□□□□ 0.83
PNKP-213ENST00000599543 DNAJB7Q7Z6W7 309 aaPredicted RBP20.21■□□□□ 0.83
PNKP-213ENST00000599543 MFSD6LQ8IWD5 586 aa20.21■□□□□ 0.83
PNKP-213ENST00000599543 FAM200AQ8TCP9 573 aa20.21■□□□□ 0.83
PNKP-213ENST00000599543 LEO1Q8WVC0 666 aaPredicted RBP20.21■□□□□ 0.83
PNKP-213ENST00000599543 CLDN23Q96B33 292 aa20.21■□□□□ 0.83
PNKP-213ENST00000599543 SAAL1Q96ER3 474 aa20.21■□□□□ 0.83
PNKP-213ENST00000599543 ZCWPW1Q9H0M4 648 aa20.21■□□□□ 0.83
PNKP-213ENST00000599543 TRPV5Q9NQA5 729 aa20.21■□□□□ 0.83
PNKP-213ENST00000599543 RCOR1Q9UKL0 485 aa20.21■□□□□ 0.83
PNKP-213ENST00000599543 CFAP45Q9UL16 551 aa20.21■□□□□ 0.83
PNKP-213ENST00000599543 HEPACAM2A8MVW5 462 aa20.2■□□□□ 0.82
PNKP-213ENST00000599543 KPNA7A9QM74 516 aa20.2■□□□□ 0.82
PNKP-213ENST00000599543 CUTAO60888 179 aa20.2■□□□□ 0.82
PNKP-213ENST00000599543 LDHAP00338 332 aaKnown RBP20.2■□□□□ 0.82
PNKP-213ENST00000599543 PNPLA4P41247 253 aa20.2■□□□□ 0.82
PNKP-213ENST00000599543 CASP5P51878 434 aa20.2■□□□□ 0.82
PNKP-213ENST00000599543 KRT85P78386 507 aa20.2■□□□□ 0.82
PNKP-213ENST00000599543 NUCB2P80303 420 aa20.2■□□□□ 0.82
PNKP-213ENST00000599543 TFAMQ00059 246 aaKnown RBP20.2■□□□□ 0.82
PNKP-213ENST00000599543 CSTF1Q05048 431 aaKnown RBP20.2■□□□□ 0.82
PNKP-213ENST00000599543 SMARCB1Q12824 385 aa20.2■□□□□ 0.82
PNKP-213ENST00000599543 ARHGAP15Q53QZ3 475 aa20.2■□□□□ 0.82
PNKP-213ENST00000599543 STXBP5Q5T5C0 1151 aa20.2■□□□□ 0.82
PNKP-213ENST00000599543 WSCD1Q658N2 575 aa20.2■□□□□ 0.82
PNKP-213ENST00000599543 BRSK2Q8IWQ3 736 aa20.2■□□□□ 0.82
PNKP-213ENST00000599543 YAF2Q8IY57 180 aa20.2■□□□□ 0.82
PNKP-213ENST00000599543 C2orf15Q8WU43 125 aaKnown RBP20.2■□□□□ 0.82
PNKP-213ENST00000599543 SPATA32Q96LK8 384 aa20.2■□□□□ 0.82
PNKP-213ENST00000599543 HINFPQ9BQA5 517 aa20.2■□□□□ 0.82
PNKP-213ENST00000599543 ATXN3LQ9H3M9 355 aa20.2■□□□□ 0.82
PNKP-213ENST00000599543 PANK4Q9NVE7 773 aa20.2■□□□□ 0.82
PNKP-213ENST00000599543 RBAKQ9NYW8 714 aaPredicted RBP20.2■□□□□ 0.82
PNKP-213ENST00000599543 NDRG2Q9UN36 371 aaKnown RBP20.2■□□□□ 0.82
PNKP-213ENST00000599543 PIAS3Q9Y6X2 628 aa20.2■□□□□ 0.82
PNKP-213ENST00000599543 ZNF638Q14966 1978 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms