RNA–Protein interactions for RNA: ENST00000598938.1

LIG1-216, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-216ENST00000598938 ANKS3Q6ZW76 656 aa19.53■□□□□ 0.72
LIG1-216ENST00000598938 FAM114A1Q8IWE2 563 aa19.53■□□□□ 0.72
LIG1-216ENST00000598938 TAS1R2Q8TE23 839 aa19.53■□□□□ 0.72
LIG1-216ENST00000598938 NAT10Q9H0A0 1025 aaKnown RBP19.53■□□□□ 0.72
LIG1-216ENST00000598938 IGFLR1Q9H665 355 aa19.53■□□□□ 0.72
LIG1-216ENST00000598938 MTRRQ9UBK8 725 aa19.53■□□□□ 0.72
LIG1-216ENST00000598938 TSC2P49815 1807 aa19.53■□□□□ 0.72
LIG1-216ENST00000598938 TMEM221A6NGB7 291 aa19.52■□□□□ 0.72
LIG1-216ENST00000598938 M0R296 226 aa19.52■□□□□ 0.72
LIG1-216ENST00000598938 PMM2O15305 246 aa19.52■□□□□ 0.72
LIG1-216ENST00000598938 CNPP09543 421 aaKnown RBP19.52■□□□□ 0.72
LIG1-216ENST00000598938 PIK3CAP42336 1068 aa19.52■□□□□ 0.72
LIG1-216ENST00000598938 DUSP6Q16828 381 aa19.52■□□□□ 0.72
LIG1-216ENST00000598938 CDKAL1Q5VV42 579 aa19.52■□□□□ 0.72
LIG1-216ENST00000598938 LIMS2Q7Z4I7 341 aa19.52■□□□□ 0.72
LIG1-216ENST00000598938 SUGP1Q8IWZ8 645 aaKnown RBP19.52■□□□□ 0.72
LIG1-216ENST00000598938 PRSS33Q8NF86 280 aa19.52■□□□□ 0.72
LIG1-216ENST00000598938 TAF4BQ92750 862 aa19.52■□□□□ 0.72
LIG1-216ENST00000598938 KLHL5Q96PQ7 755 aa19.52■□□□□ 0.72
LIG1-216ENST00000598938 CDCA3Q99618 268 aaPredicted RBP19.52■□□□□ 0.72
LIG1-216ENST00000598938 EMILIN2Q9BXX0 1053 aa19.52■□□□□ 0.72
LIG1-216ENST00000598938 TLE6Q9H808 572 aa19.52■□□□□ 0.72
LIG1-216ENST00000598938 SAMSN1Q9NSI8 373 aaKnown RBP19.52■□□□□ 0.72
LIG1-216ENST00000598938 CLEC1BQ9P126 229 aa19.52■□□□□ 0.72
LIG1-216ENST00000598938 DSEQ9UL01 958 aa19.52■□□□□ 0.72
LIG1-216ENST00000598938 L1RE1Q9UN81 338 aa19.52■□□□□ 0.72
LIG1-216ENST00000598938 COQ4Q9Y3A0 265 aa19.52■□□□□ 0.72
LIG1-216ENST00000598938 TIMM13Q9Y5L4 95 aaPredicted RBP19.52■□□□□ 0.72
LIG1-216ENST00000598938 BACE2Q9Y5Z0 518 aa19.52■□□□□ 0.72
LIG1-216ENST00000598938 ZDBF2Q9HCK1 2354 aa19.52■□□□□ 0.72
LIG1-216ENST00000598938 TEX28O15482 410 aa19.51■□□□□ 0.71
LIG1-216ENST00000598938 TBC1D4O60343 1298 aa19.51■□□□□ 0.71
LIG1-216ENST00000598938 OAZ2O95190 189 aa19.51■□□□□ 0.71
LIG1-216ENST00000598938 ASS1P00966 412 aaKnown RBP19.51■□□□□ 0.71
LIG1-216ENST00000598938 NRIP1P48552 1158 aa19.51■□□□□ 0.71
LIG1-216ENST00000598938 FMO5P49326 533 aa19.51■□□□□ 0.71
LIG1-216ENST00000598938 YWHAHQ04917 246 aaPredicted RBP19.51■□□□□ 0.71
LIG1-216ENST00000598938 NCAPHQ15003 741 aa19.51■□□□□ 0.71
LIG1-216ENST00000598938 SGSM1Q2NKQ1 1148 aa19.51■□□□□ 0.71
LIG1-216ENST00000598938 ZNF699Q32M78 642 aa19.51■□□□□ 0.71
LIG1-216ENST00000598938 RBM23Q86U06 439 aaKnown RBP19.51■□□□□ 0.71
LIG1-216ENST00000598938 TOP6BLQ8N6T0 577 aa19.51■□□□□ 0.71
LIG1-216ENST00000598938 FBXL13Q8NEE6 735 aa19.51■□□□□ 0.71
LIG1-216ENST00000598938 PBXIP1Q96AQ6 731 aa19.51■□□□□ 0.71
LIG1-216ENST00000598938 CLSTN3Q9BQT9 956 aa19.51■□□□□ 0.71
LIG1-216ENST00000598938 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.51■□□□□ 0.71
LIG1-216ENST00000598938 SNX9Q9Y5X1 595 aa19.51■□□□□ 0.71
LIG1-216ENST00000598938 H7C4K7 107 aa19.5■□□□□ 0.71
LIG1-216ENST00000598938 PER2O15055 1255 aa19.5■□□□□ 0.71
LIG1-216ENST00000598938 HUS1O60921 280 aa19.5■□□□□ 0.71
LIG1-216ENST00000598938 N4BP1O75113 896 aaKnown RBP19.5■□□□□ 0.71
LIG1-216ENST00000598938 CLASP2O75122 1294 aaKnown RBP19.5■□□□□ 0.71
LIG1-216ENST00000598938 AFPP02771 609 aaKnown RBP19.5■□□□□ 0.71
LIG1-216ENST00000598938 RPL17P18621 184 aaKnown RBP19.5■□□□□ 0.71
LIG1-216ENST00000598938 ZXDAP98168 799 aa19.5■□□□□ 0.71
LIG1-216ENST00000598938 KCNH2Q12809 1159 aa19.5■□□□□ 0.71
LIG1-216ENST00000598938 WDR72Q3MJ13 1102 aa19.5■□□□□ 0.71
LIG1-216ENST00000598938 WSCD1Q658N2 575 aa19.5■□□□□ 0.71
LIG1-216ENST00000598938 OVOS1Q6IE37 1185 aa19.5■□□□□ 0.71
LIG1-216ENST00000598938 RSPO2Q6UXX9 243 aaPredicted RBP19.5■□□□□ 0.71
LIG1-216ENST00000598938 DPH6Q7L8W6 267 aa19.5■□□□□ 0.71
LIG1-216ENST00000598938 FBXL6Q8N531 539 aa19.5■□□□□ 0.71
LIG1-216ENST00000598938 AOPEPQ8N6M6 819 aa19.5■□□□□ 0.71
LIG1-216ENST00000598938 SEMA4DQ92854 862 aa19.5■□□□□ 0.71
LIG1-216ENST00000598938 IRF2BPLQ9H1B7 796 aa19.5■□□□□ 0.71
LIG1-216ENST00000598938 FANCLQ9NW38 375 aa19.5■□□□□ 0.71
LIG1-216ENST00000598938 RAB20Q9NX57 234 aa19.5■□□□□ 0.71
LIG1-216ENST00000598938 MAGEC2Q9UBF1 373 aaPredicted RBP19.5■□□□□ 0.71
LIG1-216ENST00000598938 KCNJ18B7U540 433 aa19.49■□□□□ 0.71
LIG1-216ENST00000598938 P4HA2O15460 535 aa19.49■□□□□ 0.71
LIG1-216ENST00000598938 ADAM12O43184 909 aa19.49■□□□□ 0.71
LIG1-216ENST00000598938 ADH1AP07327 375 aa19.49■□□□□ 0.71
LIG1-216ENST00000598938 EEF1GP26641 437 aaKnown RBP19.49■□□□□ 0.71
LIG1-216ENST00000598938 MTIF2P46199 727 aaKnown RBP19.49■□□□□ 0.71
LIG1-216ENST00000598938 ZNF165P49910 485 aa19.49■□□□□ 0.71
LIG1-216ENST00000598938 MYL7Q01449 175 aa19.49■□□□□ 0.71
LIG1-216ENST00000598938 KCNC3Q14003 757 aa19.49■□□□□ 0.71
LIG1-216ENST00000598938 KCNJ12Q14500 433 aa19.49■□□□□ 0.71
LIG1-216ENST00000598938 SOWAHAQ2M3V2 549 aa19.49■□□□□ 0.71
LIG1-216ENST00000598938 HSP90AA4PQ58FG1 418 aa19.49■□□□□ 0.71
LIG1-216ENST00000598938 SLC8B1Q6J4K2 584 aa19.49■□□□□ 0.71
LIG1-216ENST00000598938 ZNF280DQ6N043 979 aa19.49■□□□□ 0.71
LIG1-216ENST00000598938 METTL23Q86XA0 190 aa19.49■□□□□ 0.71
LIG1-216ENST00000598938 TMEM86AQ8N2M4 240 aa19.49■□□□□ 0.71
LIG1-216ENST00000598938 PDCL2Q8N4E4 241 aa19.49■□□□□ 0.71
LIG1-216ENST00000598938 SPATA18Q8TC71 538 aa19.49■□□□□ 0.71
LIG1-216ENST00000598938 PHF7Q9BWX1 381 aaPredicted RBP19.49■□□□□ 0.71
LIG1-216ENST00000598938 OXCT2Q9BYC2 517 aaPredicted RBP19.49■□□□□ 0.71
LIG1-216ENST00000598938 FBXL5Q9UKA1 691 aa19.49■□□□□ 0.71
LIG1-216ENST00000598938 USP34Q70CQ2 3546 aa19.49■□□□□ 0.71
LIG1-216ENST00000598938 CACNA1HO95180 2353 aa19.48■□□□□ 0.71
LIG1-216ENST00000598938 LRRN2O75325 713 aa19.48■□□□□ 0.71
LIG1-216ENST00000598938 C1RP00736 705 aa19.48■□□□□ 0.71
LIG1-216ENST00000598938 FAM163BP0C2L3 166 aa19.48■□□□□ 0.71
LIG1-216ENST00000598938 KLRC2P26717 231 aa19.48■□□□□ 0.71
LIG1-216ENST00000598938 CLCN4P51793 760 aa19.48■□□□□ 0.71
LIG1-216ENST00000598938 TNNC1P63316 161 aa19.48■□□□□ 0.71
LIG1-216ENST00000598938 SIGLEC14Q08ET2 396 aa19.48■□□□□ 0.71
LIG1-216ENST00000598938 IQCB1Q15051 598 aa19.48■□□□□ 0.71
LIG1-216ENST00000598938 MAN2A1Q16706 1144 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms