RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 ZNF131P52739 623 aa18.42■□□□□ 0.54
PNKP-210ENST00000597965 ATXN1P54253 815 aaKnown RBP18.42■□□□□ 0.54
PNKP-210ENST00000597965 SIM2Q14190 667 aaPredicted RBP18.42■□□□□ 0.54
PNKP-210ENST00000597965 C9orf57Q5W0N0 161 aa18.42■□□□□ 0.54
PNKP-210ENST00000597965 PRR23BQ6ZRT6 265 aa18.42■□□□□ 0.54
PNKP-210ENST00000597965 LONP2Q86WA8 852 aa18.42■□□□□ 0.54
PNKP-210ENST00000597965 GPBP1Q86WP2 473 aa18.42■□□□□ 0.54
PNKP-210ENST00000597965 SENP8Q96LD8 212 aa18.42■□□□□ 0.54
PNKP-210ENST00000597965 KIF2CQ99661 725 aa18.42■□□□□ 0.54
PNKP-210ENST00000597965 DNAJC25Q9H1X3 360 aa18.42■□□□□ 0.54
PNKP-210ENST00000597965 CPSF3Q9UKF6 684 aaKnown RBP18.42■□□□□ 0.54
PNKP-210ENST00000597965 SLC27A5Q9Y2P5 690 aa18.42■□□□□ 0.54
PNKP-210ENST00000597965 C2CD2Q9Y426 696 aa18.42■□□□□ 0.54
PNKP-210ENST00000597965 NPHP3-ACAD11A0A0J9YXS1 232 aa18.41■□□□□ 0.54
PNKP-210ENST00000597965 SLC38A8A6NNN8 435 aa18.41■□□□□ 0.54
PNKP-210ENST00000597965 SPECC1L-ADORA2AF8WAN1 911 aa18.41■□□□□ 0.54
PNKP-210ENST00000597965 NRG2O14511 850 aaPredicted RBP18.41■□□□□ 0.54
PNKP-210ENST00000597965 VNN2O95498 520 aa18.41■□□□□ 0.54
PNKP-210ENST00000597965 GABRR2P28476 465 aa18.41■□□□□ 0.54
PNKP-210ENST00000597965 LONP1P36776 959 aaKnown RBP18.41■□□□□ 0.54
PNKP-210ENST00000597965 AMPD2Q01433 879 aa18.41■□□□□ 0.54
PNKP-210ENST00000597965 CACNB1Q02641 598 aaPredicted RBP18.41■□□□□ 0.54
PNKP-210ENST00000597965 GPR158Q5T848 1215 aa18.41■□□□□ 0.54
PNKP-210ENST00000597965 JADE1Q6IE81 842 aa18.41■□□□□ 0.54
PNKP-210ENST00000597965 ATAD1Q8NBU5 361 aa18.41■□□□□ 0.54
PNKP-210ENST00000597965 NETO1Q8TDF5 533 aa18.41■□□□□ 0.54
PNKP-210ENST00000597965 BPIFB1Q8TDL5 484 aa18.41■□□□□ 0.54
PNKP-210ENST00000597965 EXOC4Q96A65 974 aa18.41■□□□□ 0.54
PNKP-210ENST00000597965 SEPT5Q99719 369 aaPredicted RBP18.41■□□□□ 0.54
PNKP-210ENST00000597965 ZHX3Q9H4I2 956 aa18.41■□□□□ 0.54
PNKP-210ENST00000597965 TASP1Q9H6P5 420 aa18.41■□□□□ 0.54
PNKP-210ENST00000597965 NUP210Q8TEM1 1887 aaPredicted RBP18.41■□□□□ 0.54
PNKP-210ENST00000597965 PIRO00625 290 aa18.4■□□□□ 0.54
PNKP-210ENST00000597965 HOXA6P31267 233 aa18.4■□□□□ 0.54
PNKP-210ENST00000597965 CTHP32929 405 aa18.4■□□□□ 0.54
PNKP-210ENST00000597965 MCM2P49736 904 aa18.4■□□□□ 0.54
PNKP-210ENST00000597965 GTF2BQ00403 316 aa18.4■□□□□ 0.54
PNKP-210ENST00000597965 SATB1Q01826 763 aa18.4■□□□□ 0.54
PNKP-210ENST00000597965 MGAT5BQ3V5L5 792 aa18.4■□□□□ 0.54
PNKP-210ENST00000597965 GAREM2Q75VX8 874 aa18.4■□□□□ 0.54
PNKP-210ENST00000597965 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.4■□□□□ 0.54
PNKP-210ENST00000597965 NT5DC4Q86YG4 428 aa18.4■□□□□ 0.54
PNKP-210ENST00000597965 SPPL2BQ8TCT7 592 aa18.4■□□□□ 0.54
PNKP-210ENST00000597965 CRISPLD1Q9H336 500 aa18.4■□□□□ 0.54
PNKP-210ENST00000597965 NCOR2Q9Y618 2525 aa18.39■□□□□ 0.53
PNKP-210ENST00000597965 ANO9A1A5B4 782 aa18.39■□□□□ 0.53
PNKP-210ENST00000597965 SOBPA7XYQ1 873 aa18.39■□□□□ 0.53
PNKP-210ENST00000597965 TGM1P22735 817 aa18.39■□□□□ 0.53
PNKP-210ENST00000597965 DDX6P26196 483 aaKnown RBP eCLIP18.39■□□□□ 0.53
PNKP-210ENST00000597965 GJB2P29033 226 aa18.39■□□□□ 0.53
PNKP-210ENST00000597965 TAF6P49848 677 aa18.39■□□□□ 0.53
PNKP-210ENST00000597965 SPEM2Q0P670 501 aa18.39■□□□□ 0.53
PNKP-210ENST00000597965 DHX8Q14562 1220 aaKnown RBP18.39■□□□□ 0.53
PNKP-210ENST00000597965 SLC39A12Q504Y0 691 aa18.39■□□□□ 0.53
PNKP-210ENST00000597965 ADALQ6DHV7 355 aa18.39■□□□□ 0.53
PNKP-210ENST00000597965 DCP1BQ8IZD4 617 aaKnown RBP18.39■□□□□ 0.53
PNKP-210ENST00000597965 KRI1Q8N9T8 703 aaKnown RBP18.39■□□□□ 0.53
PNKP-210ENST00000597965 ZCWPW1Q9H0M4 648 aa18.39■□□□□ 0.53
PNKP-210ENST00000597965 ST6GALNAC4Q9H4F1 302 aa18.39■□□□□ 0.53
PNKP-210ENST00000597965 CYB561D2O14569 222 aa18.38■□□□□ 0.53
PNKP-210ENST00000597965 ATG13O75143 517 aa18.38■□□□□ 0.53
PNKP-210ENST00000597965 PNPLA4P41247 253 aa18.38■□□□□ 0.53
PNKP-210ENST00000597965 GUCY2FP51841 1108 aa18.38■□□□□ 0.53
PNKP-210ENST00000597965 POSTNQ15063 836 aa18.38■□□□□ 0.53
PNKP-210ENST00000597965 CSRP2Q16527 193 aa18.38■□□□□ 0.53
PNKP-210ENST00000597965 ITPRIPL2Q3MIP1 535 aa18.38■□□□□ 0.53
PNKP-210ENST00000597965 SV2CQ496J9 727 aa18.38■□□□□ 0.53
PNKP-210ENST00000597965 STXBP5Q5T5C0 1151 aa18.38■□□□□ 0.53
PNKP-210ENST00000597965 BRAPQ7Z569 592 aa18.38■□□□□ 0.53
PNKP-210ENST00000597965 DDX1Q92499 740 aaKnown RBP18.38■□□□□ 0.53
PNKP-210ENST00000597965 RAD54LQ92698 747 aa18.38■□□□□ 0.53
PNKP-210ENST00000597965 HVCN1Q96D96 273 aa18.38■□□□□ 0.53
PNKP-210ENST00000597965 RSPRY1Q96DX4 576 aa18.38■□□□□ 0.53
PNKP-210ENST00000597965 CCSER1Q9C0I3 900 aa18.38■□□□□ 0.53
PNKP-210ENST00000597965 DPP3Q9NY33 737 aa18.38■□□□□ 0.53
PNKP-210ENST00000597965 GTSE1Q9NYZ3 720 aa18.38■□□□□ 0.53
PNKP-210ENST00000597965 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.38■□□□□ 0.53
PNKP-210ENST00000597965 IL18RAPO95256 599 aa18.37■□□□□ 0.53
PNKP-210ENST00000597965 NFICP08651 508 aa18.37■□□□□ 0.53
PNKP-210ENST00000597965 AVPR1AP37288 418 aa18.37■□□□□ 0.53
PNKP-210ENST00000597965 ACOT2P49753 483 aa18.37■□□□□ 0.53
PNKP-210ENST00000597965 CCINQ13939 588 aa18.37■□□□□ 0.53
PNKP-210ENST00000597965 LPAL2Q16609 132 aa18.37■□□□□ 0.53
PNKP-210ENST00000597965 CEP68Q76N32 757 aa18.37■□□□□ 0.53
PNKP-210ENST00000597965 OR10T2Q8NGX3 314 aa18.37■□□□□ 0.53
PNKP-210ENST00000597965 LARP4BQ92615 738 aaKnown RBP18.37■□□□□ 0.53
PNKP-210ENST00000597965 TMX3Q96JJ7 454 aa18.37■□□□□ 0.53
PNKP-210ENST00000597965 ZNF560Q96MR9 790 aa18.37■□□□□ 0.53
PNKP-210ENST00000597965 PYM1Q9BRP8 204 aaKnown RBP18.37■□□□□ 0.53
PNKP-210ENST00000597965 MKNK1Q9BUB5 465 aa18.37■□□□□ 0.53
PNKP-210ENST00000597965 UPF2Q9HAU5 1272 aaKnown RBP18.37■□□□□ 0.53
PNKP-210ENST00000597965 SEMA4GQ9NTN9 838 aa18.37■□□□□ 0.53
PNKP-210ENST00000597965 AGO2Q9UKV8 859 aaKnown RBP18.37■□□□□ 0.53
PNKP-210ENST00000597965 EXOC7Q9UPT5 735 aa18.37■□□□□ 0.53
PNKP-210ENST00000597965 SMC3Q9UQE7 1217 aa18.37■□□□□ 0.53
PNKP-210ENST00000597965 STYXL1Q9Y6J8 313 aa18.37■□□□□ 0.53
PNKP-210ENST00000597965 NCANO14594 1321 aa18.37■□□□□ 0.53
PNKP-210ENST00000597965 CCDC163A0A0D9SF12 145 aa18.36■□□□□ 0.53
PNKP-210ENST00000597965 CHURC1-FNTBB4DL54 471 aa18.36■□□□□ 0.53
PNKP-210ENST00000597965 PPEF2O14830 753 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms