RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 TPGS2Q68CL5 300 aa16.1■□□□□ 0.17
SCN1B-204ENST00000596348 RNF19BQ6ZMZ0 732 aa16.1■□□□□ 0.17
SCN1B-204ENST00000596348 OSTM1Q86WC4 334 aa16.1■□□□□ 0.17
SCN1B-204ENST00000596348 METTL23Q86XA0 190 aa16.1■□□□□ 0.17
SCN1B-204ENST00000596348 CD320Q9NPF0 282 aa16.1■□□□□ 0.17
SCN1B-204ENST00000596348 ZDHHC7Q9NXF8 308 aa16.1■□□□□ 0.17
SCN1B-204ENST00000596348 NOTCH4Q99466 2003 aa16.1■□□□□ 0.17
SCN1B-204ENST00000596348 SLC16A3O15427 465 aaKnown RBP16.09■□□□□ 0.17
SCN1B-204ENST00000596348 HCRTO43612 131 aa16.09■□□□□ 0.17
SCN1B-204ENST00000596348 PHACTR2O75167 634 aa16.09■□□□□ 0.17
SCN1B-204ENST00000596348 EPB41P11171 864 aaKnown RBP16.09■□□□□ 0.17
SCN1B-204ENST00000596348 KRT13P13646 458 aa16.09■□□□□ 0.17
SCN1B-204ENST00000596348 MTHFRP42898 656 aa16.09■□□□□ 0.17
SCN1B-204ENST00000596348 GCLMP48507 274 aa16.09■□□□□ 0.17
SCN1B-204ENST00000596348 CDR1P51861 262 aa16.09■□□□□ 0.17
SCN1B-204ENST00000596348 ENPEPQ07075 957 aa16.09■□□□□ 0.17
SCN1B-204ENST00000596348 ADCY1Q08828 1119 aa16.09■□□□□ 0.17
SCN1B-204ENST00000596348 PAK1Q13153 545 aa16.09■□□□□ 0.17
SCN1B-204ENST00000596348 TRPC3Q13507 836 aa16.09■□□□□ 0.17
SCN1B-204ENST00000596348 NCOA4Q13772 614 aa16.09■□□□□ 0.17
SCN1B-204ENST00000596348 ELMSAN1Q6PJG2 1045 aa16.09■□□□□ 0.17
SCN1B-204ENST00000596348 FOXR2Q6PJQ5 311 aa16.09■□□□□ 0.17
SCN1B-204ENST00000596348 ADHFE1Q8IWW8 467 aa16.09■□□□□ 0.17
SCN1B-204ENST00000596348 TCEAL8Q8IYN2 117 aa16.09■□□□□ 0.17
SCN1B-204ENST00000596348 ADGRF2Q8IZF7 708 aa16.09■□□□□ 0.17
SCN1B-204ENST00000596348 TOP6BLQ8N6T0 577 aa16.09■□□□□ 0.17
SCN1B-204ENST00000596348 KBTBD7Q8WVZ9 684 aa16.09■□□□□ 0.17
SCN1B-204ENST00000596348 SMG7Q92540 1137 aaKnown RBP16.09■□□□□ 0.17
SCN1B-204ENST00000596348 RIPOR3Q96MK2 946 aa16.09■□□□□ 0.17
SCN1B-204ENST00000596348 PGLYRP2Q96PD5 576 aa16.09■□□□□ 0.17
SCN1B-204ENST00000596348 MED15Q96RN5 788 aa16.09■□□□□ 0.17
SCN1B-204ENST00000596348 OXCT2Q9BYC2 517 aaPredicted RBP16.09■□□□□ 0.17
SCN1B-204ENST00000596348 RHOBTB2Q9BYZ6 727 aa16.09■□□□□ 0.17
SCN1B-204ENST00000596348 PRKD2Q9BZL6 878 aa16.09■□□□□ 0.17
SCN1B-204ENST00000596348 CRISPLD1Q9H336 500 aa16.09■□□□□ 0.17
SCN1B-204ENST00000596348 PRKAG3Q9UGI9 489 aa16.09■□□□□ 0.17
SCN1B-204ENST00000596348 AFF4Q9UHB7 1163 aaKnown RBP16.09■□□□□ 0.17
SCN1B-204ENST00000596348 R3HCC1Q9Y3T6 440 aaKnown RBP16.09■□□□□ 0.17
SCN1B-204ENST00000596348 GABRDO14764 452 aa16.08■□□□□ 0.16
SCN1B-204ENST00000596348 CCL16O15467 120 aa16.08■□□□□ 0.16
SCN1B-204ENST00000596348 STAU1O95793 577 aaKnown RBP16.08■□□□□ 0.16
SCN1B-204ENST00000596348 HLA-DRAP01903 254 aa16.08■□□□□ 0.16
SCN1B-204ENST00000596348 HOXA9P31269 272 aa16.08■□□□□ 0.16
SCN1B-204ENST00000596348 GPR17Q13304 367 aa16.08■□□□□ 0.16
SCN1B-204ENST00000596348 CCDC142Q17RM4 750 aa16.08■□□□□ 0.16
SCN1B-204ENST00000596348 DPCR1Q3MIW9 517 aa16.08■□□□□ 0.16
SCN1B-204ENST00000596348 WDR72Q3MJ13 1102 aa16.08■□□□□ 0.16
SCN1B-204ENST00000596348 PPM1LQ5SGD2 360 aa16.08■□□□□ 0.16
SCN1B-204ENST00000596348 ATAT1Q5SQI0 421 aa16.08■□□□□ 0.16
SCN1B-204ENST00000596348 LRRTM3Q86VH5 581 aa16.08■□□□□ 0.16
SCN1B-204ENST00000596348 TMEM86AQ8N2M4 240 aa16.08■□□□□ 0.16
SCN1B-204ENST00000596348 TTC9BQ8N6N2 239 aa16.08■□□□□ 0.16
SCN1B-204ENST00000596348 CEP63Q96MT8 703 aa16.08■□□□□ 0.16
SCN1B-204ENST00000596348 NECTIN4Q96NY8 510 aa16.08■□□□□ 0.16
SCN1B-204ENST00000596348 PHF7Q9BWX1 381 aaPredicted RBP16.08■□□□□ 0.16
SCN1B-204ENST00000596348 ZCWPW1Q9H0M4 648 aa16.08■□□□□ 0.16
SCN1B-204ENST00000596348 MMRN2Q9H8L6 949 aa16.08■□□□□ 0.16
SCN1B-204ENST00000596348 VRTNQ9H8Y1 702 aa16.08■□□□□ 0.16
SCN1B-204ENST00000596348 CYP4F11Q9HBI6 524 aa16.08■□□□□ 0.16
SCN1B-204ENST00000596348 POLIQ9UNA4 740 aa16.08■□□□□ 0.16
SCN1B-204ENST00000596348 BICDL2A1A5D9 508 aa16.07■□□□□ 0.16
SCN1B-204ENST00000596348 MTMR11A4FU01 709 aa16.07■□□□□ 0.16
SCN1B-204ENST00000596348 C19orf67A6NJJ6 358 aa16.07■□□□□ 0.16
SCN1B-204ENST00000596348 PRRG1O14668 218 aa16.07■□□□□ 0.16
SCN1B-204ENST00000596348 LRRN2O75325 713 aa16.07■□□□□ 0.16
SCN1B-204ENST00000596348 HNRNPA1P09651 372 aaKnown RBP eCLIP16.07■□□□□ 0.16
SCN1B-204ENST00000596348 SP100P23497 879 aaPredicted RBP16.07■□□□□ 0.16
SCN1B-204ENST00000596348 ACAT1P24752 427 aaKnown RBP16.07■□□□□ 0.16
SCN1B-204ENST00000596348 ATICP31939 592 aa16.07■□□□□ 0.16
SCN1B-204ENST00000596348 UVSSAQ2YD98 709 aa16.07■□□□□ 0.16
SCN1B-204ENST00000596348 ZNF699Q32M78 642 aa16.07■□□□□ 0.16
SCN1B-204ENST00000596348 SLC39A12Q504Y0 691 aa16.07■□□□□ 0.16
SCN1B-204ENST00000596348 RBM43Q6ZSC3 357 aaKnown RBP16.07■□□□□ 0.16
SCN1B-204ENST00000596348 CCDC149Q6ZUS6 474 aa16.07■□□□□ 0.16
SCN1B-204ENST00000596348 THEM5Q8N1Q8 247 aa16.07■□□□□ 0.16
SCN1B-204ENST00000596348 ATAD1Q8NBU5 361 aa16.07■□□□□ 0.16
SCN1B-204ENST00000596348 TAS1R2Q8TE23 839 aa16.07■□□□□ 0.16
SCN1B-204ENST00000596348 SYAP1Q96A49 352 aaPredicted RBP16.07■□□□□ 0.16
SCN1B-204ENST00000596348 MMS19Q96T76 1030 aa16.07■□□□□ 0.16
SCN1B-204ENST00000596348 PKMYT1Q99640 499 aa16.07■□□□□ 0.16
SCN1B-204ENST00000596348 MRPL45Q9BRJ2 306 aaKnown RBP16.07■□□□□ 0.16
SCN1B-204ENST00000596348 TMLHEQ9NVH6 421 aa16.07■□□□□ 0.16
SCN1B-204ENST00000596348 DDX43Q9NXZ2 648 aaKnown RBP16.07■□□□□ 0.16
SCN1B-204ENST00000596348 NME7Q9Y5B8 376 aa16.07■□□□□ 0.16
SCN1B-204ENST00000596348 INSL5Q9Y5Q6 135 aa16.07■□□□□ 0.16
SCN1B-204ENST00000596348 MYO10Q9HD67 2058 aa16.07■□□□□ 0.16
SCN1B-204ENST00000596348 ASS1P00966 412 aaKnown RBP16.06■□□□□ 0.16
SCN1B-204ENST00000596348 WARSP23381 471 aaKnown RBP16.06■□□□□ 0.16
SCN1B-204ENST00000596348 ELF1P32519 619 aa16.06■□□□□ 0.16
SCN1B-204ENST00000596348 GTF2H1P32780 548 aa16.06■□□□□ 0.16
SCN1B-204ENST00000596348 PIK3CAP42336 1068 aa16.06■□□□□ 0.16
SCN1B-204ENST00000596348 NTHL1P78549 312 aa16.06■□□□□ 0.16
SCN1B-204ENST00000596348 DCAF17Q5H9S7 520 aaPredicted RBP16.06■□□□□ 0.16
SCN1B-204ENST00000596348 SPOPLQ6IQ16 392 aa16.06■□□□□ 0.16
SCN1B-204ENST00000596348 CYP26C1Q6V0L0 522 aa16.06■□□□□ 0.16
SCN1B-204ENST00000596348 DPH6Q7L8W6 267 aa16.06■□□□□ 0.16
SCN1B-204ENST00000596348 FILIP1Q7Z7B0 1213 aa16.06■□□□□ 0.16
SCN1B-204ENST00000596348 MLKLQ8NB16 471 aa16.06■□□□□ 0.16
SCN1B-204ENST00000596348 SPATA18Q8TC71 538 aa16.06■□□□□ 0.16
SCN1B-204ENST00000596348 SLC35C1Q96A29 364 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms