RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 CXorf38Q8TB03 319 aa16.29■□□□□ 0.2
TRIM28-205ENST00000595028 BORCS6Q96GS4 357 aa16.29■□□□□ 0.2
TRIM28-205ENST00000595028 SMOC2Q9H3U7 446 aa16.29■□□□□ 0.2
TRIM28-205ENST00000595028 KCNK12Q9HB15 430 aa16.29■□□□□ 0.2
TRIM28-205ENST00000595028 INTS13Q9NVM9 706 aa16.29■□□□□ 0.2
TRIM28-205ENST00000595028 IGSF9Q9P2J2 1179 aa16.29■□□□□ 0.2
TRIM28-205ENST00000595028 DNMT3BQ9UBC3 853 aaKnown RBP16.29■□□□□ 0.2
TRIM28-205ENST00000595028 EP300Q09472 2414 aaPredicted RBP16.29■□□□□ 0.2
TRIM28-205ENST00000595028 MED19A0JLT2 244 aaPredicted RBP16.28■□□□□ 0.2
TRIM28-205ENST00000595028 KPNA7A9QM74 516 aa16.28■□□□□ 0.2
TRIM28-205ENST00000595028 CYB561D2O14569 222 aa16.28■□□□□ 0.2
TRIM28-205ENST00000595028 LAMP2P13473 410 aa16.28■□□□□ 0.2
TRIM28-205ENST00000595028 PSMD2Q13200 908 aa16.28■□□□□ 0.2
TRIM28-205ENST00000595028 GPR17Q13304 367 aa16.28■□□□□ 0.2
TRIM28-205ENST00000595028 WDR49Q8IV35 697 aa16.28■□□□□ 0.2
TRIM28-205ENST00000595028 GOLGA5Q8TBA6 731 aa16.28■□□□□ 0.2
TRIM28-205ENST00000595028 ANKRD36BP1Q96IX9 119 aa16.28■□□□□ 0.2
TRIM28-205ENST00000595028 AVENQ9NQS1 362 aaPredicted RBP16.28■□□□□ 0.2
TRIM28-205ENST00000595028 SIX4Q9UIU6 781 aa16.28■□□□□ 0.2
TRIM28-205ENST00000595028 CDH7Q9ULB5 785 aa16.28■□□□□ 0.2
TRIM28-205ENST00000595028 AGAP1Q9UPQ3 857 aa16.28■□□□□ 0.2
TRIM28-205ENST00000595028 YIPF1Q9Y548 306 aa16.28■□□□□ 0.2
TRIM28-205ENST00000595028 ZFP37Q9Y6Q3 630 aaPredicted RBP16.28■□□□□ 0.2
TRIM28-205ENST00000595028 MTMR11A4FU01 709 aa16.27■□□□□ 0.2
TRIM28-205ENST00000595028 KRT37O76014 449 aa16.27■□□□□ 0.2
TRIM28-205ENST00000595028 RPN1P04843 607 aaKnown RBP16.27■□□□□ 0.2
TRIM28-205ENST00000595028 DPYDQ12882 1025 aa16.27■□□□□ 0.2
TRIM28-205ENST00000595028 BFSP1Q12934 665 aa16.27■□□□□ 0.2
TRIM28-205ENST00000595028 TDGQ13569 410 aa16.27■□□□□ 0.2
TRIM28-205ENST00000595028 HTR4Q13639 388 aa16.27■□□□□ 0.2
TRIM28-205ENST00000595028 WSCD1Q658N2 575 aa16.27■□□□□ 0.2
TRIM28-205ENST00000595028 METTL23Q86XA0 190 aa16.27■□□□□ 0.2
TRIM28-205ENST00000595028 NPAS3Q8IXF0 933 aa16.27■□□□□ 0.2
TRIM28-205ENST00000595028 OR5B17Q8NGF7 314 aa16.27■□□□□ 0.2
TRIM28-205ENST00000595028 ITFG1Q8TB96 612 aa16.27■□□□□ 0.2
TRIM28-205ENST00000595028 FGF13Q92913 245 aa16.27■□□□□ 0.2
TRIM28-205ENST00000595028 PGLYRP2Q96PD5 576 aa16.27■□□□□ 0.2
TRIM28-205ENST00000595028 TMEM209Q96SK2 561 aa16.27■□□□□ 0.2
TRIM28-205ENST00000595028 RTP3Q9BQQ7 232 aa16.27■□□□□ 0.2
TRIM28-205ENST00000595028 DUSP12Q9UNI6 340 aa16.27■□□□□ 0.2
TRIM28-205ENST00000595028 ZFHX4Q86UP3 3567 aa16.26■□□□□ 0.19
TRIM28-205ENST00000595028 ANHXE9PGG2 379 aa16.26■□□□□ 0.19
TRIM28-205ENST00000595028 ZNF202O95125 648 aa16.26■□□□□ 0.19
TRIM28-205ENST00000595028 TNNC2P02585 160 aa16.26■□□□□ 0.19
TRIM28-205ENST00000595028 RHOP08100 348 aa16.26■□□□□ 0.19
TRIM28-205ENST00000595028 KRT19P08727 400 aa16.26■□□□□ 0.19
TRIM28-205ENST00000595028 RBP5P82980 135 aa16.26■□□□□ 0.19
TRIM28-205ENST00000595028 CYP24A1Q07973 514 aa16.26■□□□□ 0.19
TRIM28-205ENST00000595028 TWF1Q12792 350 aa16.26■□□□□ 0.19
TRIM28-205ENST00000595028 PLD1Q13393 1074 aa16.26■□□□□ 0.19
TRIM28-205ENST00000595028 PSMD6Q15008 389 aa16.26■□□□□ 0.19
TRIM28-205ENST00000595028 SLC5A9Q2M3M2 681 aa16.26■□□□□ 0.19
TRIM28-205ENST00000595028 SCARA3Q6AZY7 606 aa16.26■□□□□ 0.19
TRIM28-205ENST00000595028 ELMOD1Q8N336 334 aa16.26■□□□□ 0.19
TRIM28-205ENST00000595028 CSGALNACT2Q8N6G5 542 aa16.26■□□□□ 0.19
TRIM28-205ENST00000595028 RSAD2Q8WXG1 361 aa16.26■□□□□ 0.19
TRIM28-205ENST00000595028 NXPE3Q969Y0 559 aa16.26■□□□□ 0.19
TRIM28-205ENST00000595028 CCDC47Q96A33 483 aaKnown RBP16.26■□□□□ 0.19
TRIM28-205ENST00000595028 CGRRF1Q99675 332 aa16.26■□□□□ 0.19
TRIM28-205ENST00000595028 ZCWPW1Q9H0M4 648 aa16.26■□□□□ 0.19
TRIM28-205ENST00000595028 CRISPLD1Q9H336 500 aa16.26■□□□□ 0.19
TRIM28-205ENST00000595028 MRPS23Q9Y3D9 190 aaKnown RBP16.26■□□□□ 0.19
TRIM28-205ENST00000595028 TPRP12270 2363 aaKnown RBP16.25■□□□□ 0.19
TRIM28-205ENST00000595028 EXOC3O60645 756 aa16.25■□□□□ 0.19
TRIM28-205ENST00000595028 PRPF40AO75400 957 aaKnown RBP16.25■□□□□ 0.19
TRIM28-205ENST00000595028 RHOBTB3O94955 611 aa16.25■□□□□ 0.19
TRIM28-205ENST00000595028 DLATP10515 647 aaKnown RBP16.25■□□□□ 0.19
TRIM28-205ENST00000595028 PTPN2P17706 415 aa16.25■□□□□ 0.19
TRIM28-205ENST00000595028 DUSP4Q13115 394 aa16.25■□□□□ 0.19
TRIM28-205ENST00000595028 DUOXA2Q1HG44 320 aa16.25■□□□□ 0.19
TRIM28-205ENST00000595028 PRSS36Q5K4E3 855 aa16.25■□□□□ 0.19
TRIM28-205ENST00000595028 CENPPQ6IPU0 288 aa16.25■□□□□ 0.19
TRIM28-205ENST00000595028 THEM5Q8N1Q8 247 aa16.25■□□□□ 0.19
TRIM28-205ENST00000595028 PDCL2Q8N4E4 241 aa16.25■□□□□ 0.19
TRIM28-205ENST00000595028 RDH13Q8NBN7 331 aa16.25■□□□□ 0.19
TRIM28-205ENST00000595028 ATAD1Q8NBU5 361 aa16.25■□□□□ 0.19
TRIM28-205ENST00000595028 ING5Q8WYH8 240 aa16.25■□□□□ 0.19
TRIM28-205ENST00000595028 CCDC127Q96BQ5 260 aa16.25■□□□□ 0.19
TRIM28-205ENST00000595028 CCDC34Q96HJ3 373 aa16.25■□□□□ 0.19
TRIM28-205ENST00000595028 FNBP1Q96RU3 617 aa16.25■□□□□ 0.19
TRIM28-205ENST00000595028 CORO1BQ9BR76 489 aa16.25■□□□□ 0.19
TRIM28-205ENST00000595028 GZF1Q9H116 711 aaPredicted RBP16.25■□□□□ 0.19
TRIM28-205ENST00000595028 KCTD10Q9H3F6 313 aa16.25■□□□□ 0.19
TRIM28-205ENST00000595028 GDAP2Q9NXN4 497 aa16.25■□□□□ 0.19
TRIM28-205ENST00000595028 CEP72Q9P209 647 aa16.25■□□□□ 0.19
TRIM28-205ENST00000595028 HSFX1Q9UBD0 423 aa16.25■□□□□ 0.19
TRIM28-205ENST00000595028 L1RE1Q9UN81 338 aa16.25■□□□□ 0.19
TRIM28-205ENST00000595028 NUMBLQ9Y6R0 609 aa16.25■□□□□ 0.19
TRIM28-205ENST00000595028 GOLGA6L4A6NEF3 574 aa16.24■□□□□ 0.19
TRIM28-205ENST00000595028 HUS1O60921 280 aa16.24■□□□□ 0.19
TRIM28-205ENST00000595028 CEBPBP17676 345 aa16.24■□□□□ 0.19
TRIM28-205ENST00000595028 MYO1EQ12965 1108 aa16.24■□□□□ 0.19
TRIM28-205ENST00000595028 KCNB1Q14721 858 aa16.24■□□□□ 0.19
TRIM28-205ENST00000595028 SLC39A12Q504Y0 691 aa16.24■□□□□ 0.19
TRIM28-205ENST00000595028 IQCEQ6IPM2 695 aa16.24■□□□□ 0.19
TRIM28-205ENST00000595028 PDZD4Q76G19 769 aaPredicted RBP16.24■□□□□ 0.19
TRIM28-205ENST00000595028 SLC9A9Q8IVB4 645 aa16.24■□□□□ 0.19
TRIM28-205ENST00000595028 TTC9BQ8N6N2 239 aa16.24■□□□□ 0.19
TRIM28-205ENST00000595028 TOP6BLQ8N6T0 577 aa16.24■□□□□ 0.19
TRIM28-205ENST00000595028 SPATA18Q8TC71 538 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms